Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 5.9e-67 257.3 121 100.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 2.2e-61 238.8 121 90.9
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 2.2e-61 238.8 121 91.7
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 2.2e-61 238.8 121 91.7
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 4.8e-61 237.7 121 90.9
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.8e-60 235.7 121 90.1
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.1e-60 235.0 121 90.1
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 3.8e-58 228.0 119 85.7
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 8.5e-58 226.9 119 85.7
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 5.5e-57 224.2 119 84.0
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 7.2e-57 223.8 119 84.9
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 9.4e-57 223.4 119 83.2
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.2e-56 223.0 118 86.4
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.2e-56 223.0 120 85.8
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 2.7e-56 221.9 121 86.0
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 4.7e-56 221.1 119 84.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 4.7e-56 221.1 119 85.7
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 8.0e-56 220.3 119 84.9
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 1.0e-55 219.9 119 85.7
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.4e-55 219.5 119 83.2
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 4.0e-55 218.0 119 84.9
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 4.0e-55 218.0 119 81.5
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 5.2e-55 217.6 119 81.5
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 8.8e-55 216.9 119 83.2
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 79.8
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 82.4
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 82.4
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.6e-54 215.3 119 79.8
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 4.4e-54 214.5 126 81.7
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 5.7e-54 214.2 119 79.8
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 5.7e-54 214.2 119 81.5
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 7.5e-54 213.8 119 83.2
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 9.7e-54 213.4 119 81.5
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.7e-53 212.6 119 80.7
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.2e-53 212.2 119 81.5
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 4.8e-53 211.1 119 80.7
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 4.8e-53 211.1 119 80.7
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 8.2e-53 210.3 119 79.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 8.2e-53 210.3 117 81.2
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.1e-52 209.9 119 79.8
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-52 208.8 121 83.5
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-52 208.8 121 83.5
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-52 208.8 121 83.5
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 3.1e-52 208.4 119 78.2
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.1e-52 208.0 119 79.0
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 5.3e-52 207.6 119 78.2
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 5.3e-52 207.6 117 80.3
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 7.0e-52 207.2 121 82.6
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.2e-51 206.5 121 82.6
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.2e-51 206.5 122 81.1
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 2.0e-51 205.7 117 79.5
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 3.5e-51 204.9 120 83.3
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 4.5e-51 204.5 122 81.1
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 5.9e-51 204.1 119 77.3
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 119 78.2
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 116 79.3
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.7e-50 202.6 120 79.2
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 5.5e-49 197.6 117 77.8
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 1.6e-48 196.1 119 75.6
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.1e-48 195.7 133 72.9
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 2.1e-48 195.7 119 76.5
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 2.7e-48 195.3 115 76.5
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 76.7
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 76.7
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 76.7
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 76.7
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 4.7e-48 194.5 116 75.9
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 8.0e-48 193.7 116 75.9
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 8.0e-48 193.7 116 75.9
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.0e-47 193.4 116 75.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.4e-47 193.0 117 73.5
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 2.3e-47 192.2 120 74.2
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 74.1
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 74.1
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 74.1
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-46 189.9 116 73.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-46 189.9 116 73.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.2e-46 189.9 116 73.3
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 2.0e-46 189.1 116 74.1
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 3.4e-46 188.3 116 74.1
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.4e-46 188.3 91 94.5
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 9.8e-46 186.8 124 69.4
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 1.7e-45 186.0 124 69.4
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 7.7e-43 177.2 90 87.8
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 3.8e-42 174.9 130 67.7
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 8.5e-42 173.7 87 87.4
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.1e-41 173.3 90 85.6
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.5e-41 172.9 90 83.3
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 9.5e-41 170.2 119 66.4
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 9.5e-41 170.2 91 85.7
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.2e-40 169.9 117 68.4
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 2.8e-40 168.7 99 76.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 2.8e-40 168.7 90 83.3
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 4.7e-40 167.9 87 83.9
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 6.1e-40 167.5 87 88.5
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 6.8e-39 164.1 87 85.1
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 2.2e-37 159.1 86 81.4
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 6.3e-37 157.5 115 63.5
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 8.3e-37 157.1 77 90.9
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 5.4e-36 154.5 86 80.2
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 9.2e-36 153.7 86 80.2
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 9.2e-36 153.7 86 80.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 9.2e-36 153.7 86 79.1
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 4.5e-35 151.4 87 73.6
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 5.9e-35 151.0 86 77.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 2.3e-34 149.1 101 70.3
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.3e-34 149.1 115 61.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.3e-34 149.1 115 61.7
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 4.3e-33 144.8 84 76.2
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 4.3e-33 144.8 73 89.0
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 5.6e-33 144.4 89 76.4
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 9.5e-33 143.7 100 67.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 6.1e-32 141.0 103 65.0
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 2.2e-29 132.5 97 67.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.1e-25 120.2 67 74.6
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 8.9e-23 110.5 65 72.3
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 2.0e-19 99.4 54 81.5
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.6e-16 89.7 110 42.7
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.1e-15 87.0 119 45.4
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 4.0e-15 85.1 117 37.6
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 4.4e-14 81.6 115 39.1
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 7.1e-12 74.3 146 34.2
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 6.6e-10 67.8 33 93.9
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 9.5e-09 63.9 31 90.3
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 1.6e-08 63.2 30 83.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 3.4e-06 55.5 25 96.0


User provided reference genes

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