Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.9e-76 289.3 162 100.0
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.6e-72 276.2 137 98.5
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 3.8e-53 211.8 137 79.6
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 1.5e-49 199.9 162 72.8
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 6.3e-48 194.5 138 75.4
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 8.2e-48 194.1 162 72.2
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 1.4e-47 193.4 162 69.8
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 1.2e-38 163.7 140 63.6
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 1.4e-36 156.8 135 63.7
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.9e-36 156.4 85 90.6
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 1.4e-34 150.2 142 58.5
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 6.7e-34 147.9 160 65.0
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 1.5e-33 146.7 160 62.5
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 3.3e-33 145.6 160 62.5
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 4.4e-33 145.2 166 63.3
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 4.4e-33 145.2 120 75.8
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.3e-32 143.7 149 59.1
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 2.2e-32 142.9 80 81.2
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 2.2e-32 142.9 80 81.2
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 3.7e-32 142.1 143 58.0
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 3.7e-32 142.1 104 68.3
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 8.2e-32 141.0 84 76.2
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 8.2e-32 141.0 86 77.9
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 1.1e-31 140.6 165 55.2
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.1e-31 140.6 98 69.4
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 1.4e-31 140.2 102 81.4
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 1.8e-31 139.8 162 59.3
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 1.8e-31 139.8 168 60.1
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 4.1e-31 138.7 91 71.4
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 7.0e-31 137.9 144 54.2
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.0e-30 136.3 169 56.8
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.5e-30 135.6 79 78.5
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 3.5e-30 135.6 120 75.0
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 4.5e-30 135.2 79 77.2
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 4.5e-30 135.2 170 58.8
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 4.5e-30 135.2 145 53.8
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 4.5e-30 135.2 137 55.5
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 5.9e-30 134.8 146 54.8
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 5.9e-30 134.8 161 53.4
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 5.9e-30 134.8 140 62.9
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 7.7e-30 134.4 120 64.2
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.0e-29 134.0 80 77.5
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 1.0e-29 134.0 143 52.4
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 1.0e-29 134.0 120 72.5
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.0e-29 134.0 166 57.2
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 1.7e-29 133.3 139 52.5
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 1.7e-29 133.3 103 77.7
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 1.7e-29 133.3 103 77.7
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 1.7e-29 133.3 81 75.3
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 1.7e-29 133.3 164 59.8
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.2e-29 132.9 117 70.9
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 3.8e-29 132.1 99 65.7
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 3.8e-29 132.1 144 52.8
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 3.8e-29 132.1 120 72.5
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 5.0e-29 131.7 141 51.1
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 6.5e-29 131.3 119 70.6
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 6.5e-29 131.3 119 71.4
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 8.5e-29 131.0 119 70.6
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 8.5e-29 131.0 138 52.9
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 1.1e-28 130.6 119 70.6
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 1.9e-28 129.8 158 53.8
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 1.9e-28 129.8 122 68.9
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 3.2e-28 129.0 99 70.7
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 3.2e-28 129.0 78 76.9
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 4.2e-28 128.6 99 80.8
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 7.2e-28 127.9 103 65.0
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 9.4e-28 127.5 99 77.8
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 1.2e-27 127.1 105 75.2
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.2e-27 127.1 138 51.4
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 1.2e-27 127.1 102 74.5
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.6e-27 126.7 78 74.4
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 1.6e-27 126.7 99 77.8
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 1.6e-27 126.7 169 55.0
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 1.6e-27 126.7 99 78.8
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 2.1e-27 126.3 159 57.2
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.7e-27 125.9 79 75.9
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 2.7e-27 125.9 117 58.1
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 2.7e-27 125.9 98 75.5
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 3.6e-27 125.6 99 76.8
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 3.6e-27 125.6 121 66.9
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 4.7e-27 125.2 78 71.8
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 4.7e-27 125.2 99 77.8
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 4.7e-27 125.2 78 74.4
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 4.7e-27 125.2 103 64.1
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 6.1e-27 124.8 104 58.7
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 6.1e-27 124.8 112 58.0
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 8.0e-27 124.4 119 61.3
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 1.0e-26 124.0 95 82.1
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 1.0e-26 124.0 79 68.4
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 1.0e-26 124.0 114 69.3
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 1.4e-26 123.6 123 52.8
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 1.4e-26 123.6 123 52.8
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 1.4e-26 123.6 123 52.8
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 1.4e-26 123.6 133 51.1
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.8e-26 123.2 143 49.0
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 2.3e-26 122.9 99 77.8
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 2.3e-26 122.9 96 61.5
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 3.0e-26 122.5 100 74.0
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 3.0e-26 122.5 99 77.8
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 5.2e-26 121.7 69 78.3
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 5.2e-26 121.7 78 67.9
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 5.2e-26 121.7 78 71.8
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 8.8e-26 120.9 93 60.2
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.5e-25 120.2 148 49.3
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.0e-25 119.8 143 49.0
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 2.6e-25 119.4 78 69.2
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 2.6e-25 119.4 122 65.6
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 3.3e-25 119.0 162 47.5
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.7e-24 116.7 138 48.6
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 2.8e-24 115.9 139 59.7
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 1.1e-23 114.0 156 46.8
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 2.4e-23 112.8 77 66.2
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 4.1e-23 112.1 86 61.6
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 7.0e-23 111.3 142 48.6
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.6e-22 110.2 77 61.0
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 1.6e-22 110.2 87 59.8
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 3.5e-22 109.0 87 58.6
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 1.1e-20 104.0 68 73.5
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 9.4e-20 100.9 103 63.1
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 4.7e-19 98.6 100 54.0
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 1.0e-18 97.4 85 76.5
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 5.2e-18 95.1 121 51.2
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 2.2e-16 89.7 56 69.6
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.4e-15 85.1 79 72.2
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.4e-15 85.1 79 72.2
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 9.1e-15 84.3 58 63.8
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.2e-14 84.0 79 62.0
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 5.9e-14 81.6 78 56.4
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 1.1e-12 77.4 55 61.8
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 1.1e-12 77.4 55 61.8
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 1.4e-10 70.5 44 72.7
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 2.8e-08 62.8 64 60.9
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 7.0e-07 58.2 48 58.3


User provided reference genes

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