Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.2e-155 553.1 286 100.0
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 7.0e-127 457.6 287 86.1
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 8.3e-112 407.5 284 77.1
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.7e-110 402.5 284 76.4
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 7.8e-110 401.0 284 76.4
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.1e-108 397.1 287 73.9
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.4e-66 257.3 283 57.2
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 7.2e-55 218.4 306 47.4
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.7e-48 197.2 308 44.5
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 5.0e-48 195.7 308 44.2
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 3.2e-47 193.0 305 42.6
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 2.1e-46 190.3 291 45.0
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 1.5e-44 184.1 311 43.7
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 1.4e-42 177.6 332 42.2
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 4.1e-42 176.0 310 42.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 2.9e-40 169.9 309 39.8
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 6.5e-40 168.7 314 40.8
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.1e-39 167.9 322 38.8
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 2.1e-38 163.7 331 38.1
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 3.6e-38 162.9 306 37.6
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 6.7e-37 158.7 296 39.2
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.1e-36 157.9 303 38.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.1e-36 157.9 312 38.5
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 6.3e-35 152.1 303 38.9
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.4e-34 151.0 311 38.3
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 2.4e-34 150.2 311 38.3
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 2.4e-34 150.2 311 37.9
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 4.1e-34 149.4 300 39.3
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 5.3e-34 149.1 301 39.2
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 7.0e-34 148.7 314 35.4
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.0e-33 147.1 313 35.8
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.5e-33 146.4 308 38.0
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.0e-32 144.8 308 37.3
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.7e-32 144.1 311 36.7
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.8e-32 142.9 313 37.1
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.8e-32 142.9 308 37.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.1e-31 141.4 335 36.7
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.2e-31 139.8 313 36.7
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 7.2e-31 138.7 258 39.5
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 7.2e-31 138.7 313 36.4
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.1e-30 137.1 320 36.6
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 8.0e-30 135.2 305 35.7
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 8.0e-30 135.2 310 36.8
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.0e-29 134.8 306 37.6
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 1.4e-29 134.4 310 36.8
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 3.0e-29 133.3 322 35.4
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 5.2e-29 132.5 311 35.0
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.2e-29 132.5 313 35.1
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 3.3e-28 129.8 313 36.1
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 4.4e-28 129.4 313 35.5
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.7e-27 127.5 315 34.6
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.2e-27 127.1 303 36.6
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 2.8e-27 126.7 271 36.9
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.7e-27 126.3 314 33.1
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 8.2e-27 125.2 256 38.3
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.4e-26 124.4 318 33.6
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.8e-26 124.0 313 32.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 2.4e-26 123.6 327 32.1
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 1.2e-25 121.3 245 37.1
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.2e-25 121.3 296 35.1
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.6e-25 120.9 306 34.3
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 6.5e-24 115.5 282 34.8
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 8.5e-24 115.2 296 34.8
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.9e-23 114.0 296 33.8
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.5e-23 113.6 321 32.1
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.5e-23 113.6 321 32.1
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 4.2e-23 112.8 312 32.1
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 3.6e-22 109.8 289 34.9
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 4.7e-22 109.4 296 33.4
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 6.1e-22 109.0 267 34.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.3e-21 107.1 249 33.7
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.3e-21 107.1 283 33.6
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 6.8e-21 105.5 302 32.5
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 2.6e-20 103.6 341 32.3
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 1.3e-19 101.3 320 30.9
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 2.8e-19 100.1 298 31.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.8e-19 99.4 287 32.8
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 2.4e-18 97.1 338 31.7
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.6e-17 94.4 301 31.9
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.0e-16 91.7 306 28.8
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 3.8e-16 89.7 298 28.9
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 5.0e-16 89.4 303 27.4
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.6e-14 84.3 232 32.3
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 4.0e-13 79.7 327 26.9
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 1.2e-12 78.2 243 32.9
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 2.6e-12 77.0 310 29.0
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 3.4e-12 76.6 306 26.8
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 3.1e-10 70.1 163 36.2
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 4.1e-10 69.7 319 24.5
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 9.2e-10 68.6 235 31.1
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 2.9e-08 63.5 211 28.4
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 9.5e-07 58.5 145 33.8


User provided reference genes

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