Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000805g0060 Nicotiana tabacum HOM05D004113 ORTHO05D005233 8.4e-47 189.9 88 100.0
Nitab4.5_0011816g0010 Nicotiana tabacum HOM05D004113 ORTHO05D005233 8.4e-47 189.9 88 100.0
Peaxi162Scf00589g00001 Petunia axillaris HOM05D004113 ORTHO05D005233 2.8e-42 174.9 88 87.5
CAN.G1163.3 Capsicum annuum HOM05D004113 ORTHO05D005233 6.9e-41 170.2 88 88.6
Solyc11g005820.1 Solanum lycopersicum HOM05D004113 ORTHO05D005233 2.6e-40 168.3 88 87.5
PGSC0003DMG400028678 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.4e-40 167.9 88 87.5
Sopen11g001780 Solanum pennellii HOM05D004113 ORTHO05D005233 7.6e-40 166.8 88 86.4
Cpa.g.sc42.138 Carica papaya HOM05D004113 ORTHO05D005233 1.4e-33 146.0 88 69.3
DCAR_001364 Daucus carota HOM05D004113 ORTHO05D005233 1.8e-33 145.6 88 73.9
Actinidia06637 Actinidia chinensis HOM05D004113 ORTHO05D005233 3.4e-32 141.4 85 71.8
Dinv06063 Davidia involucrata HOM05D004113 ORTHO05D005233 3.4e-32 141.4 88 69.3
Migut.L00890 Erythranthe guttata HOM05D004113 ORTHO05D005233 3.4e-32 141.4 88 70.5
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 3.4e-32 141.4 85 71.8
MD01G1038300 Malus domestica HOM05D004113 ORTHO05D005233 7.6e-32 140.2 86 68.6
RhsimUnG0133000 Rhododendron simsii HOM05D004113 ORTHO05D005233 7.6e-32 140.2 85 70.6
RcHm_v2.0_Chr2g0120401 Rosa chinensis HOM05D004113 ORTHO05D005233 7.6e-32 140.2 86 70.9
Oeu047690.1 Olea europaea HOM05D004113 ORTHO05D005233 9.9e-32 139.8 88 67.0
MD15G1314600 Malus domestica HOM05D004113 ORTHO05D005233 2.2e-31 138.7 88 65.9
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 2.2e-31 138.7 88 68.2
Cc07_g18140 Coffea canephora HOM05D004113 ORTHO05D005233 2.9e-31 138.3 86 69.8
Potri.007G108301 Populus trichocarpa HOM05D004113 ORTHO05D005233 2.9e-31 138.3 86 69.8
Haze_25111 Corylus avellana HOM05D004113 ORTHO05D005233 1.4e-30 136.0 85 69.4
Migut.H00735 Erythranthe guttata HOM05D004113 ORTHO05D005233 1.9e-30 135.6 88 64.8
Glyma.06G152400 Glycine max HOM05D004113 ORTHO05D005233 1.9e-30 135.6 87 66.7
FvH4_1g24160 Fragaria vesca HOM05D004113 ORTHO05D005233 2.5e-30 135.2 86 67.4
FAN19G1994 Fragaria x ananassa HOM05D004113 ORTHO05D005233 2.5e-30 135.2 86 67.4
Glyma.04G214000 Glycine max HOM05D004113 ORTHO05D005233 2.5e-30 135.2 88 64.8
Lj1g0003494 Lotus japonicus HOM05D004113 ORTHO05D005233 2.5e-30 135.2 88 64.8
COL.COLO4_35683 Corchorus olitorius HOM05D004113 ORTHO05D005233 3.2e-30 134.8 88 65.9
QL06p029175 Quercus lobata HOM05D004113 ORTHO05D005233 3.2e-30 134.8 87 67.8
Duzib147G1472 Durio zibethinus HOM05D004113 ORTHO05D005233 5.5e-30 134.0 88 64.8
FAN16G3582 Fragaria x ananassa HOM05D004113 ORTHO05D005233 5.5e-30 134.0 86 67.4
FAN26G3157 Fragaria x ananassa HOM05D004113 ORTHO05D005233 7.1e-30 133.7 86 66.3
Gohir.A11G230200 Gossypium hirsutum HOM05D004113 ORTHO05D005233 7.1e-30 133.7 85 67.1
SGA_v2.0_scaffold355G49762 Striga asiatica HOM05D004113 ORTHO05D005233 7.1e-30 133.7 84 67.9
CANSAT01G1731 Cannabis sativa HOM05D004113 ORTHO05D005233 9.3e-30 133.3 86 69.8
CANSAT01G2965 Cannabis sativa HOM05D004113 ORTHO05D005233 9.3e-30 133.3 86 69.8
Cfa002816 Carpinus fangiana HOM05D004113 ORTHO05D005233 9.3e-30 133.3 84 70.2
CiPaw.03G129200 Carya illinoinensis HOM05D004113 ORTHO05D005233 9.3e-30 133.3 86 66.3
Gohir.D11G230300 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.2e-29 132.9 85 65.9
Gorai.003G067200 Gossypium raimondii HOM05D004113 ORTHO05D005233 1.2e-29 132.9 85 67.1
Lsat_1_v5_gn_8_17501 Lactuca sativa HOM05D004113 ORTHO05D005233 1.2e-29 132.9 85 69.4
Oeu004248.1 Olea europaea HOM05D004113 ORTHO05D005233 1.6e-29 132.5 85 64.7
arahy.Tifrunner.gnm1.ann1.FMR9EU Arachis hypogaea HOM05D004113 ORTHO05D005233 2.1e-29 132.1 86 64.0
arahy.Tifrunner.gnm1.ann1.PRK495 Arachis hypogaea HOM05D004113 ORTHO05D005233 2.1e-29 132.1 86 64.0
FAN28G2384 Fragaria x ananassa HOM05D004113 ORTHO05D005233 7.9e-29 130.2 86 65.1
Phvul.009G149400 Phaseolus vulgaris HOM05D004113 ORTHO05D005233 7.9e-29 130.2 88 62.5
VMungo1309G2376 Vigna mungo HOM05D004113 ORTHO05D005233 1.0e-28 129.8 88 62.5
MSTRG.23446 Avicennia marina HOM05D004113 ORTHO05D005233 1.3e-28 129.4 87 64.4
Lalb_Chr00c34g0408621 Lupinus albus HOM05D004113 ORTHO05D005233 1.3e-28 129.4 88 63.6
Lalb_Chr12g0203181 Lupinus albus HOM05D004113 ORTHO05D005233 1.3e-28 129.4 88 63.6
TAR628G1510 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.8e-28 129.0 88 67.0
Thecc.01G128300 Theobroma cacao HOM05D004113 ORTHO05D005233 2.3e-28 128.6 88 62.5
Psat0s10365g0080 Pisum sativum HOM05D004113 ORTHO05D005233 6.7e-28 127.1 85 61.2
Psat5g060000 Pisum sativum HOM05D004113 ORTHO05D005233 6.7e-28 127.1 85 61.2
Atru.chr4.844 Acer truncatum HOM05D004113 ORTHO05D005233 8.7e-28 126.7 87 60.9
HanXRQChr12g0368871 Helianthus annuus HOM05D004113 ORTHO05D005233 8.7e-28 126.7 85 63.5
TWI75G0632 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 8.7e-28 126.7 85 63.5
Ciclev10002604m.g Citrus clementina HOM05D004113 ORTHO05D005233 1.1e-27 126.3 83 65.1
Hma1.2p1_0528F.1_g173060 Hydrangea macrophylla HOM05D004113 ORTHO05D005233 1.1e-27 126.3 86 62.8
TPR.G34657 Trifolium pratense HOM05D004113 ORTHO05D005233 1.5e-27 125.9 85 62.4
Medtr3g095980 Medicago truncatula HOM05D004113 ORTHO05D005233 1.9e-27 125.6 85 61.2
ClCG01G015470 Citrullus lanatus HOM05D004113 ORTHO05D005233 3.3e-27 124.8 86 67.4
MELO3C008049.2 Cucumis melo HOM05D004113 ORTHO05D005233 7.4e-27 123.6 86 67.4
CsaV3_6G041710 Cucumis sativus L. HOM05D004113 ORTHO05D005233 1.3e-26 122.9 86 66.3
Lalb_Chr08g0238441 Lupinus albus HOM05D004113 ORTHO05D005233 1.3e-26 122.9 85 60.0
Ca_16933_v3 Cicer arietinum L. HOM05D004113 ORTHO05D005233 2.1e-26 122.1 85 61.2
VMungo0251G1253 Vigna mungo HOM05D004113 ORTHO05D005233 2.1e-26 122.1 88 61.4
HanXRQChr08g0218241 Helianthus annuus HOM05D004113 ORTHO05D005233 2.8e-26 121.7 88 59.1
Gohir.A10G084907 Gossypium hirsutum HOM05D004113 ORTHO05D005233 8.2e-26 120.2 88 59.1
Gohir.D10G106500 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.1e-25 119.8 88 59.1
Sed0011375 Sechium edule HOM05D004113 ORTHO05D005233 1.1e-25 119.8 84 65.5
Thhalv10005004m.g Eutrema salsugineum HOM05D004113 ORTHO05D005233 1.2e-24 116.3 85 60.0
Nn5g28620 Nelumbo nucifera HOM05D004113 ORTHO05D005233 1.2e-24 116.3 86 58.1
AUR62040065 Chenopodium quinoa HOM05D004113 ORTHO05D005233 2.0e-24 115.5 85 63.5
THA.LOC104819318 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 4.5e-24 114.4 82 61.0
EL10Ac1g01806 Beta vulgaris HOM05D004113 ORTHO05D005233 7.6e-24 113.6 85 62.4
BolC3t18417H Brassica oleracea HOM05D004113 ORTHO05D005233 1.0e-23 113.2 85 58.8
BcaB04g19979 Brassica carinata HOM05D004113 ORTHO05D005233 1.3e-23 112.8 85 58.8
BcaC01g02693 Brassica carinata HOM05D004113 ORTHO05D005233 2.2e-23 112.1 85 57.6
A06p31350 Brassica napus HOM05D004113 ORTHO05D005233 2.2e-23 112.1 85 57.6
C03p61570 Brassica napus HOM05D004113 ORTHO05D005233 2.2e-23 112.1 85 57.6
AUR62022459 Chenopodium quinoa HOM05D004113 ORTHO05D005233 3.8e-23 111.3 85 61.2
PSO063G6208 Papaver somniferum HOM05D004113 ORTHO05D005233 4.9e-23 110.9 85 56.5
Sed0024266 Sechium edule HOM05D004113 ORTHO05D005233 4.9e-23 110.9 88 60.2
A09p08750 Brassica napus HOM05D004113 ORTHO05D005233 8.4e-23 110.2 85 57.6
BraA09t36524Z Brassica rapa HOM05D004113 ORTHO05D005233 8.4e-23 110.2 85 57.6
Sp2g27680 Schrenkiella parvula HOM05D004113 ORTHO05D005233 8.4e-23 110.2 85 58.8
BcaB02g09804 Brassica carinata HOM05D004113 ORTHO05D005233 1.4e-22 109.4 85 57.6
CARHR278590 Cardamine hirsuta HOM05D004113 ORTHO05D005233 1.4e-22 109.4 85 57.6
Aqoxy5G02176 Aquilegia oxysepala HOM05D004113 ORTHO05D005233 1.9e-22 109.0 88 55.7
BcaC04g23305 Brassica carinata HOM05D004113 ORTHO05D005233 1.9e-22 109.0 85 57.6
C09p09900 Brassica napus HOM05D004113 ORTHO05D005233 2.5e-22 108.6 85 57.6
BolC9t53899H Brassica oleracea HOM05D004113 ORTHO05D005233 2.5e-22 108.6 85 57.6
Gorai.011G116700 Gossypium raimondii HOM05D004113 ORTHO05D005233 2.5e-22 108.6 78 59.0
PSO782G3380 Papaver somniferum HOM05D004113 ORTHO05D005233 3.2e-22 108.2 85 54.1
AT5G64620 Arabidopsis thaliana HOM05D004113 ORTHO05D005233 4.2e-22 107.8 85 56.5
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 5.5e-22 107.5 85 56.5
Sc01g0006950 Simmondsia chinensis HOM05D004113 ORTHO05D005233 5.5e-22 107.5 85 57.6
BraA06t26077Z Brassica rapa HOM05D004113 ORTHO05D005233 1.6e-21 105.9 85 55.3
CARHR287460 Cardamine hirsuta HOM05D004113 ORTHO05D005233 2.1e-21 105.5 85 54.1
THA.LOC104799518 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 4.6e-21 104.4 86 53.5
AL8G42030 Arabidopsis lyrata HOM05D004113 ORTHO05D005233 1.8e-20 102.4 85 54.1
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.9e-19 99.0 84 53.6
Aa31LG1G17330 Aethionema arabicum HOM05D004113 ORTHO05D005233 2.8e-18 95.1 85 49.4
CDE06G1377 Ceratophyllum demersum HOM05D004113 ORTHO05D005233 6.3e-18 94.0 85 49.4
BcaC01g02692 Brassica carinata HOM05D004113 ORTHO05D005233 4.1e-17 91.3 60 65.0
C03p61580 Brassica napus HOM05D004113 ORTHO05D005233 4.1e-17 91.3 60 65.0
CiPaw.04G086900 Carya illinoinensis HOM05D004113 ORTHO05D005233 1.5e-16 89.4 62 64.5
CDE08G0148 Ceratophyllum demersum HOM05D004113 ORTHO05D005233 1.5e-16 89.4 84 46.4
TWI75G0604 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 1.1e-14 83.2 94 43.6
HPP92_012690 Vanilla planifolia HOM05D004113 ORTHO05D005233 1.0e-12 76.6 90 40.0
HPP92_012697 Vanilla planifolia HOM05D004113 ORTHO05D005233 1.0e-12 76.6 90 40.0
Os08g0108100 Oryza sativa ssp. japonica HOM05D004113 ORTHO05D005233 2.5e-11 72.0 85 40.0
Zm00001eb174300 Zea mays HOM05D004113 ORTHO05D005233 4.3e-11 71.2 79 43.0
Os12g0283400 Oryza sativa ssp. japonica HOM05D004113 ORTHO05D005233 5.7e-11 70.9 85 41.2
Zm00001eb260280 Zea mays HOM05D004113 ORTHO05D005233 1.4e-09 66.2 82 41.5


User provided reference genes

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