Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000792g0230 Nicotiana tabacum HOM05D002272 ORTHO05D007337 7.5e-56 220.3 114 100.0
Atru.chr2.1621 Acer truncatum HOM05D002272 ORTHO05D007337 3.4e-24 115.2 129 48.8
Nitab4.5_0000266g0150 Nicotiana tabacum HOM05D002272 ORTHO05D007337 5.8e-24 114.4 129 49.6
Nitab4.5_0004375g0030 Nicotiana tabacum HOM05D002272 ORTHO05D007337 5.8e-24 114.4 129 49.6
CSS0028606 Camellia sinensis var. sinensis HOM05D002272 ORTHO05D007337 7.6e-24 114.0 129 48.8
Ciclev10032370m.g Citrus clementina HOM05D002272 ORTHO05D007337 7.6e-24 114.0 128 50.0
Lj9A617T61 Lonicera japonica HOM05D002272 ORTHO05D007337 7.6e-24 114.0 129 50.4
Solyc06g051200.3 Solanum lycopersicum HOM05D002272 ORTHO05D007337 1.3e-23 113.2 129 48.8
Sopen06g017110 Solanum pennellii HOM05D002272 ORTHO05D007337 1.3e-23 113.2 129 48.8
PGSC0003DMG400015641 Solanum tuberosum HOM05D002272 ORTHO05D007337 1.3e-23 113.2 129 48.8
Sabra13G0060800 Salix brachista HOM05D002272 ORTHO05D007337 2.9e-23 112.1 129 48.8
Potri.013G070100 Populus trichocarpa HOM05D002272 ORTHO05D007337 3.8e-23 111.7 129 48.1
CSS0000101 Camellia sinensis var. sinensis HOM05D002272 ORTHO05D007337 4.9e-23 111.3 129 48.1
Actinidia31727 Actinidia chinensis HOM05D002272 ORTHO05D007337 6.4e-23 110.9 129 48.8
CSS0028572 Camellia sinensis var. sinensis HOM05D002272 ORTHO05D007337 6.4e-23 110.9 129 48.8
CiPaw.02G048000 Carya illinoinensis HOM05D002272 ORTHO05D007337 8.4e-23 110.5 128 47.7
Eucgr.D01115 Eucalyptus grandis HOM05D002272 ORTHO05D007337 8.4e-23 110.5 129 48.8
Glyma.04G002300 Glycine max HOM05D002272 ORTHO05D007337 8.4e-23 110.5 129 47.3
Manes.09G134000 Manihot esculenta HOM05D002272 ORTHO05D007337 1.1e-22 110.2 128 48.4
Prupe.2G107400 Prunus persica HOM05D002272 ORTHO05D007337 1.4e-22 109.8 129 48.1
CSS0030271 Camellia sinensis var. sinensis HOM05D002272 ORTHO05D007337 1.9e-22 109.4 129 48.8
Haze_15784 Corylus avellana HOM05D002272 ORTHO05D007337 1.9e-22 109.4 128 47.7
Cfa003703 Carpinus fangiana HOM05D002272 ORTHO05D007337 2.4e-22 109.0 128 48.4
MELO3C022485.2 Cucumis melo HOM05D002272 ORTHO05D007337 2.4e-22 109.0 126 49.2
THA.LOC104805803 Tarenaya hassleriana HOM05D002272 ORTHO05D007337 2.4e-22 109.0 129 48.1
TAR365G0152 Trochodendron aralioides HOM05D002272 ORTHO05D007337 2.4e-22 109.0 129 48.8
Aa31LG1G24810 Aethionema arabicum HOM05D002272 ORTHO05D007337 3.2e-22 108.6 129 46.5
Sed0013689 Sechium edule HOM05D002272 ORTHO05D007337 3.2e-22 108.6 129 47.3
Cpa.g.sc73.31 Carica papaya HOM05D002272 ORTHO05D007337 4.2e-22 108.2 129 48.1
Lj1g0012726 Lotus japonicus HOM05D002272 ORTHO05D007337 4.2e-22 108.2 129 47.3
ClCG06G000570 Citrullus lanatus HOM05D002272 ORTHO05D007337 5.4e-22 107.8 129 48.1
MD07G1082200 Malus domestica HOM05D002272 ORTHO05D007337 5.4e-22 107.8 129 47.3
QL08p048213 Quercus lobata HOM05D002272 ORTHO05D007337 5.4e-22 107.8 128 47.7
Ah.05g177380 Amaranthus hybridus HOM05D002272 ORTHO05D007337 7.1e-22 107.5 129 46.5
Dinv43957 Davidia involucrata HOM05D002272 ORTHO05D007337 7.1e-22 107.5 129 46.5
Glyma.06G001800 Glycine max HOM05D002272 ORTHO05D007337 7.1e-22 107.5 124 48.4
Nn3g17992 Nelumbo nucifera HOM05D002272 ORTHO05D007337 7.1e-22 107.5 129 46.5
FAN01G1771 Fragaria x ananassa HOM05D002272 ORTHO05D007337 9.3e-22 107.1 129 45.0
FAN03G3487 Fragaria x ananassa HOM05D002272 ORTHO05D007337 9.3e-22 107.1 129 45.0
FAN06G0218 Fragaria x ananassa HOM05D002272 ORTHO05D007337 9.3e-22 107.1 129 45.0
Medtr3g118210 Medicago truncatula HOM05D002272 ORTHO05D007337 9.3e-22 107.1 129 46.5
SalBow5G0142 Salvia bowleyana HOM05D002272 ORTHO05D007337 9.3e-22 107.1 129 46.5
Aqoxy5G02877 Aquilegia oxysepala HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 45.7
Cc02_g26530 Coffea canephora HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 47.3
Migut.N01649 Erythranthe guttata HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 45.7
Migut.O00701 Erythranthe guttata HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 45.7
FvH4_7g08200 Fragaria vesca HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 44.2
MD02G1230700 Malus domestica HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 47.3
Oeu060722.1 Olea europaea HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 48.1
RcHm_v2.0_Chr1g0340951 Rosa chinensis HOM05D002272 ORTHO05D007337 1.2e-21 106.7 128 45.3
Thecc.05G235900 Theobroma cacao HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 48.1
TPR.G38511 Trifolium pratense HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 46.5
HPP92_010022 Vanilla planifolia HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 46.5
HPP92_015293 Vanilla planifolia HOM05D002272 ORTHO05D007337 1.2e-21 106.7 129 46.5
arahy.Tifrunner.gnm1.ann1.ZTJ4JW Arachis hypogaea HOM05D002272 ORTHO05D007337 1.6e-21 106.3 129 47.3
Rhsim07G0048100 Rhododendron simsii HOM05D002272 ORTHO05D007337 1.6e-21 106.3 129 46.5
SGA_v2.0_scaffold98G29370 Striga asiatica HOM05D002272 ORTHO05D007337 1.6e-21 106.3 129 47.3
VMungo1309G1068 Vigna mungo HOM05D002272 ORTHO05D007337 1.6e-21 106.3 129 46.5
Carub.0004s2551 Capsella rubella HOM05D002272 ORTHO05D007337 2.1e-21 105.9 129 45.7
Psat5g001240 Pisum sativum HOM05D002272 ORTHO05D007337 2.1e-21 105.9 129 46.5
arahy.Tifrunner.gnm1.ann1.5G75KN Arachis hypogaea HOM05D002272 ORTHO05D007337 3.5e-21 105.1 126 47.6
arahy.Tifrunner.gnm1.ann1.GT5X5C Arachis hypogaea HOM05D002272 ORTHO05D007337 3.5e-21 105.1 129 46.5
COL.COLO4_21824 Corchorus olitorius HOM05D002272 ORTHO05D007337 3.5e-21 105.1 129 48.1
ECA234G0777 Erigeron canadensis HOM05D002272 ORTHO05D007337 3.5e-21 105.1 129 45.0
ATR0693G201 Amborella trichopoda HOM05D002272 ORTHO05D007337 4.6e-21 104.8 128 45.3
arahy.Tifrunner.gnm1.ann1.E051EM Arachis hypogaea HOM05D002272 ORTHO05D007337 4.6e-21 104.8 129 45.7
BcaC01g05267 Brassica carinata HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 45.7
A03p23920 Brassica napus HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 45.7
C03p28540 Brassica napus HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 45.7
BolC3t15219H Brassica oleracea HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 45.7
BraA03t11607Z Brassica rapa HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 45.7
CsaV3_6G006340 Cucumis sativus L. HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 46.5
vmacro13602 Vaccinium macrocarpon HOM05D002272 ORTHO05D007337 6.0e-21 104.4 129 47.3
CDE08G1023 Ceratophyllum demersum HOM05D002272 ORTHO05D007337 7.8e-21 104.0 128 46.1
AUR62023332 Chenopodium quinoa HOM05D002272 ORTHO05D007337 7.8e-21 104.0 129 46.5
Sed0003205 Sechium edule HOM05D002272 ORTHO05D007337 7.8e-21 104.0 128 46.1
CDE06G1113 Ceratophyllum demersum HOM05D002272 ORTHO05D007337 1.0e-20 103.6 128 46.1
Ca_15285_v3 Cicer arietinum L. HOM05D002272 ORTHO05D007337 1.0e-20 103.6 129 45.0
Ca_15421_v3 Cicer arietinum L. HOM05D002272 ORTHO05D007337 1.0e-20 103.6 129 45.0
HanXRQChr03g0088221 Helianthus annuus HOM05D002272 ORTHO05D007337 1.0e-20 103.6 129 45.0
PGR083G1235 Punica granatum HOM05D002272 ORTHO05D007337 1.0e-20 103.6 129 45.7
MSTRG.4991 Avicennia marina HOM05D002272 ORTHO05D007337 1.3e-20 103.2 129 45.0
Phvul.009G117700 Phaseolus vulgaris HOM05D002272 ORTHO05D007337 1.3e-20 103.2 129 45.0
Hund17157 Selenicereus undatus HOM05D002272 ORTHO05D007337 1.3e-20 103.2 129 43.4
CARHR138100 Cardamine hirsuta HOM05D002272 ORTHO05D007337 1.7e-20 102.8 129 44.2
Thhalv10017066m.g Eutrema salsugineum HOM05D002272 ORTHO05D007337 1.7e-20 102.8 129 45.0
Lsat_1_v5_gn_4_42200 Lactuca sativa HOM05D002272 ORTHO05D007337 1.7e-20 102.8 129 45.7
unitig_61.g26435 Utricularia gibba HOM05D002272 ORTHO05D007337 1.7e-20 102.8 129 46.5
DCAR_029571 Daucus carota HOM05D002272 ORTHO05D007337 2.3e-20 102.4 129 45.7
Duzib128G1009 Durio zibethinus HOM05D002272 ORTHO05D007337 3.0e-20 102.1 129 46.5
Sp4g25160 Schrenkiella parvula HOM05D002272 ORTHO05D007337 3.0e-20 102.1 129 45.0
AL4G41670 Arabidopsis lyrata HOM05D002272 ORTHO05D007337 3.9e-20 101.7 129 44.2
AT2G43030 Arabidopsis thaliana HOM05D002272 ORTHO05D007337 3.9e-20 101.7 129 44.2
CANSAT25G1467 Cannabis sativa HOM05D002272 ORTHO05D007337 3.9e-20 101.7 129 45.0
EL10Ac1g00685 Beta vulgaris HOM05D002272 ORTHO05D007337 5.1e-20 101.3 129 43.4
CAN.G103.17 Capsicum annuum HOM05D002272 ORTHO05D007337 5.1e-20 101.3 122 47.5
Gohir.A13G159300 Gossypium hirsutum HOM05D002272 ORTHO05D007337 5.1e-20 101.3 129 45.7
Gohir.D13G164200 Gossypium hirsutum HOM05D002272 ORTHO05D007337 5.1e-20 101.3 129 45.7
MBI18_g28942_MAGBIO Magnolia biondii HOM05D002272 ORTHO05D007337 5.1e-20 101.3 129 43.4
Peaxi162Scf01343g00156 Petunia axillaris HOM05D002272 ORTHO05D007337 5.1e-20 101.3 143 44.1
Gorai.013G198500 Gossypium raimondii HOM05D002272 ORTHO05D007337 8.7e-20 100.5 129 45.0
Lalb_Chr23g0264931 Lupinus albus HOM05D002272 ORTHO05D007337 1.1e-19 100.1 129 42.6
unitig_0.g1362 Utricularia gibba HOM05D002272 ORTHO05D007337 1.5e-19 99.8 126 46.0
PSO357G0010 Papaver somniferum HOM05D002272 ORTHO05D007337 1.9e-19 99.4 130 43.8
Sc26g0001950 Simmondsia chinensis HOM05D002272 ORTHO05D007337 2.5e-19 99.0 124 45.2
TWI60G0209 Tripterygium wilfordii HOM05D002272 ORTHO05D007337 2.5e-19 99.0 129 42.6
Mapoly0005s0275 Marchantia polymorpha HOM05D002272 ORTHO05D007337 1.6e-18 96.3 129 41.9
SMO223G0016 Selaginella moellendorffii HOM05D002272 ORTHO05D007337 4.8e-18 94.7 128 40.6
AagrBONN_evm.TU.Sc2ySwM_228.763 Anthoceros agrestis HOM05D002272 ORTHO05D007337 5.3e-17 91.3 129 41.1
Zm00001eb231800 Zea mays HOM05D002272 ORTHO05D007337 1.5e-16 89.7 127 44.1
Os02g0137200 Oryza sativa ssp. japonica HOM05D002272 ORTHO05D007337 7.6e-16 87.4 130 40.8
Pp3c6_28830 Physcomitrium patens HOM05D002272 ORTHO05D007337 1.7e-15 86.3 129 38.0
Pp3c16_1020 Physcomitrium patens HOM05D002272 ORTHO05D007337 3.8e-15 85.1 129 38.0
CBR_g23410 Chara braunii HOM05D002272 ORTHO05D007337 4.3e-11 71.6 114 34.2
MD10G1167900 Malus domestica HOM05D002272 ORTHO05D007337 7.4e-11 70.9 52 65.4
CARHR283820 Cardamine hirsuta HOM05D002272 ORTHO05D007337 4.8e-10 68.2 53 56.6
AUR62038001 Chenopodium quinoa HOM05D002272 ORTHO05D007337 1.5e-08 63.2 103 38.8
Actinidia26429 Actinidia chinensis HOM05D002272 ORTHO05D007337 2.6e-08 62.4 98 39.8
Cre48.g761197 Chlamydomonas reinhardtii HOM05D002272 ORTHO05D007337 2.6e-08 62.4 128 31.2
MCO03G352 Micromonas commoda HOM05D002272 ORTHO05D007337 9.9e-08 60.5 129 30.2


User provided reference genes

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