Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 4104.7 2156 100.0
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 3966.8 2159 96.8
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 3582.0 2164 87.5
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 3545.4 2164 87.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 3151.3 1948 87.4
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 3060.4 1981 83.3
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2416.0 2177 62.7
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2374.0 2186 59.8
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2370.5 2186 61.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2370.5 2213 60.4
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2354.7 2188 59.3
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2342.8 2181 59.7
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2339.7 2184 59.3
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2320.8 2184 60.3
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2271.9 2181 59.1
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 2255.7 2185 58.8
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2254.9 2191 57.8
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2254.2 2187 58.3
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2251.1 2203 57.3
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 2229.5 2182 58.7
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2220.7 2211 57.3
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 2218.0 2185 57.7
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2216.8 2178 57.2
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 2215.3 2178 57.5
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2203.7 2198 56.9
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2201.8 2205 56.1
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2200.6 2032 58.9
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2196.0 2186 56.3
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2195.6 2192 57.3
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2195.6 2199 56.8
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2191.4 2186 56.2
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2184.8 2272 55.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2163.3 2189 55.9
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2140.2 2190 55.9
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2138.6 2183 55.2
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 2134.0 2184 55.4
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2119.4 2187 55.1
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2119.0 2191 55.2
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2115.1 2188 55.3
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2102.0 2183 55.7
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2097.4 2176 54.5
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2096.6 2187 54.6
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2085.5 2182 54.9
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2081.2 2187 55.1
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2079.3 2202 54.8
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 2076.2 2166 54.7
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 2065.0 2208 54.1
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 2061.2 2157 55.2
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2029.6 2260 52.7
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 1999.9 2136 53.0
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1986.1 2025 56.1
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 1983.4 2177 54.3
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1975.3 2100 53.9
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1961.0 2159 52.7
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 1958.7 1964 57.1
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1946.4 2286 50.0
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1946.4 1908 58.0
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 1922.9 2097 52.8
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 1892.5 2064 53.2
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 1886.3 2174 50.6
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1820.4 1891 56.1
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1799.6 1894 55.9
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1793.5 2196 49.2
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1790.0 1857 54.6
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1786.2 2137 49.4
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1783.5 2114 50.3
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1731.8 2174 48.3
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1700.3 1664 58.9
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 1689.1 1675 56.8
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1687.9 2262 46.3
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1541.9 1983 45.5
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1515.7 1532 54.6
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1456.8 1770 49.4
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1357.4 1686 48.8
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1325.1 1687 47.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1312.0 1804 43.0
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1305.8 1131 61.8
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1289.2 2299 39.4
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1288.5 1694 47.8
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1264.2 1554 49.8
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1186.0 2258 37.8
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1150.6 1930 38.0
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 2.0e-298 1030.4 1021 57.7
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 1.6e-292 1010.7 961 58.1
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 9.8e-290 1001.5 1138 51.8
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 2.5e-277 960.3 1119 52.5
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 1.1e-272 944.9 1318 43.9
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 6.6e-254 882.5 1007 51.8
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 6.6e-254 882.5 972 50.3
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.2e-248 863.2 1373 38.9
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 7.7e-210 736.1 641 60.5
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 7.2e-208 729.6 518 70.5
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 4.7e-207 726.9 2732 27.6
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 5.9e-202 709.9 872 48.5
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 5.4e-195 686.8 1454 32.7
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 3.1e-187 661.0 519 64.7
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.4e-157 560.8 423 69.0
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 8.4e-132 476.9 379 63.6
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 1.3e-121 443.0 565 51.2
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 4.5e-117 427.9 406 57.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 4.5e-117 427.9 406 57.9
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 2.9e-116 425.2 219 95.0
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 5.9e-109 401.0 230 87.4
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 5.5e-107 394.4 342 64.0
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 2.7e-106 392.1 353 59.2
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 2.1e-98 365.9 216 81.5
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 5.5e-91 341.3 339 55.5
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 1.3e-84 320.1 183 82.0
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.2e-82 313.5 344 60.5
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 3.6e-82 312.0 377 58.4
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 4.1e-78 298.5 562 37.4
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 3.0e-73 282.3 305 63.9
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 1.6e-66 260.0 179 83.2
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 1.0e-60 240.7 128 89.1
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 1.3e-55 223.8 323 43.3
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.3e-52 213.0 161 76.4
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.1e-51 210.7 157 68.2
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.5e-51 210.3 161 75.2
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 5.2e-49 201.8 224 49.6
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 1.1e-43 184.1 142 73.9
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.1e-41 177.6 134 64.9
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 4.9e-39 168.7 142 64.8
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 6.4e-39 168.3 142 64.8
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 1.4e-38 167.2 330 45.8
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.1e-33 149.4 73 90.4
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.1e-33 149.4 73 90.4
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.7e-28 133.7 64 93.8
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 3.1e-25 122.9 112 56.2
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.2e-24 120.9 177 48.6
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 1.5e-24 120.6 371 39.4
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 1.4e-22 114.0 166 43.4
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 1.2e-21 110.9 224 36.2
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 2.1e-21 110.2 55 94.5
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.7e-21 109.8 57 87.7
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 3.0e-20 106.3 79 69.6
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 1.3e-18 100.9 85 62.4
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 6.9e-17 95.1 53 83.0
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 1.7e-15 90.5 65 67.7
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 6.7e-12 78.6 91 48.4
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 1.9e-11 77.0 168 33.9
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 9.6e-11 74.7 55 70.9
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.8e-10 73.2 82 73.2
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 1.4e-06 60.8 44 77.3
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.4e-06 60.8 54 53.7
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 1.4e-06 60.8 54 53.7
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.5e-06 60.1 48 62.5
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 5.5e-06 58.9 55 58.2


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