Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 6.6e-69 263.8 127 100.0
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 9.0e-42 173.7 119 74.8
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 3.4e-41 171.8 119 74.8
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 3.4e-41 171.8 122 73.0
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 4.9e-40 167.9 121 71.9
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 9.3e-39 163.7 121 70.2
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 6.7e-37 157.5 124 66.9
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 1.5e-17 93.2 85 57.6
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 4.5e-17 91.7 120 48.3
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 2.5e-15 85.9 133 42.9
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 4.2e-15 85.1 125 40.8
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 1.6e-14 83.2 124 46.8
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 2.1e-14 82.8 120 44.2
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 2.7e-14 82.4 137 39.4
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 2.7e-14 82.4 108 44.4
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 4.6e-14 81.6 47 66.0
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 4.6e-14 81.6 73 49.3
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 6.1e-14 81.3 131 39.7
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 7.9e-14 80.9 117 42.7
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 7.9e-14 80.9 105 41.0
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 7.9e-14 80.9 144 38.9
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 1.4e-13 80.1 146 37.7
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.8e-13 79.7 83 44.6
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 1.8e-13 79.7 122 39.3
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.3e-13 79.3 83 44.6
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 3.9e-13 78.6 118 39.8
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 3.9e-13 78.6 118 39.8
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 5.1e-13 78.2 105 36.2
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 6.7e-13 77.8 118 39.8
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 1.5e-12 76.6 47 61.7
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 1.9e-12 76.3 102 40.2
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 3.3e-12 75.5 117 39.3
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 9.7e-12 73.9 119 38.7
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 1.3e-11 73.6 63 49.2
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 2.2e-11 72.8 63 50.8
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 6.3e-11 71.2 119 37.8
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 1.1e-10 70.5 131 38.2
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 1.4e-10 70.1 49 59.2
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 1.4e-10 70.1 49 59.2
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 1.4e-10 70.1 104 35.6
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 1.4e-10 70.1 110 40.9
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 1.8e-10 69.7 123 35.0
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 2.4e-10 69.3 129 34.1
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 3.1e-10 68.9 120 36.7
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 6.9e-10 67.8 55 49.1
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 6.9e-10 67.8 43 60.5
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 9.1e-10 67.4 129 39.5
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.2e-09 67.0 43 58.1
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 3.4e-09 65.5 130 38.5
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 4.5e-09 65.1 41 61.0
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 5.9e-09 64.7 57 50.9
SGA_v2.0_scaffold36G14535 Striga asiatica HOM05D007757 ORTHO05D009619 5.9e-09 64.7 79 41.8
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 7.7e-09 64.3 41 58.5
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 1.0e-08 63.9 41 58.5
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 1.0e-08 63.9 92 37.0
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 1.0e-08 63.9 41 58.5
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 1.0e-08 63.9 92 37.0
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 1.0e-08 63.9 41 58.5
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 1.0e-08 63.9 92 37.0
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 1.0e-08 63.9 64 46.9
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 1.0e-08 63.9 44 52.3
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 1.3e-08 63.5 56 50.0
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 1.7e-08 63.2 41 58.5
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 2.9e-08 62.4 46 54.3
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 3.8e-08 62.0 46 54.3
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 3.8e-08 62.0 41 56.1
BcaB03g14042 Brassica carinata HOM05D007757 ORTHO05D009619 5.0e-08 61.6 60 43.3
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 5.0e-08 61.6 41 56.1
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 5.0e-08 61.6 41 56.1
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 5.0e-08 61.6 41 56.1
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 5.0e-08 61.6 105 38.1
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 5.0e-08 61.6 119 38.7
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 6.5e-08 61.2 40 55.0
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 6.5e-08 61.2 39 53.8
Sp1g22790 Schrenkiella parvula HOM05D007757 ORTHO05D009619 1.1e-07 60.5 52 46.2
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 1.9e-07 59.7 40 52.5
BcaC06g35205 Brassica carinata HOM05D007757 ORTHO05D009619 3.2e-07 58.9 52 44.2
A07p12600 Brassica napus HOM05D007757 ORTHO05D009619 3.2e-07 58.9 52 44.2
C07p18700 Brassica napus HOM05D007757 ORTHO05D009619 3.2e-07 58.9 52 44.2
BolC7t42380H Brassica oleracea HOM05D007757 ORTHO05D009619 3.2e-07 58.9 52 44.2
BraA07t29038Z Brassica rapa HOM05D007757 ORTHO05D009619 3.2e-07 58.9 52 44.2
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 2.7e-06 55.8 111 36.0


User provided reference genes

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