Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000791g0080 Nicotiana tabacum HOM05D004123 ORTHO05D004768 1.4e-96 356.3 177 100.0
Nitab4.5_0003373g0030 Nicotiana tabacum HOM05D004123 ORTHO05D004768 1.6e-84 316.2 172 94.8
Solyc05g009380.4 Solanum lycopersicum HOM05D004123 ORTHO05D004768 7.6e-39 164.5 181 57.5
CAN.G610.78 Capsicum annuum HOM05D004123 ORTHO05D004768 2.4e-37 159.5 174 62.1
Sopen05g005180 Solanum pennellii HOM05D004123 ORTHO05D004768 2.7e-36 156.0 183 55.2
Thecc.02G229500 Theobroma cacao HOM05D004123 ORTHO05D004768 3.5e-36 155.6 164 56.7
Gohir.D04G137875 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.5e-34 150.2 164 56.1
Gorai.012G122600 Gossypium raimondii HOM05D004123 ORTHO05D004768 1.5e-34 150.2 164 56.1
Gohir.A04G098200 Gossypium hirsutum HOM05D004123 ORTHO05D004768 4.3e-34 148.7 164 55.5
Duzib268G1624 Durio zibethinus HOM05D004123 ORTHO05D004768 3.6e-33 145.6 156 57.1
Duzib251G0145 Durio zibethinus HOM05D004123 ORTHO05D004768 4.8e-33 145.2 158 55.1
Lsat_1_v5_gn_8_40481 Lactuca sativa HOM05D004123 ORTHO05D004768 8.1e-33 144.4 169 55.0
Rhsim09G0107600 Rhododendron simsii HOM05D004123 ORTHO05D004768 3.1e-32 142.5 161 56.5
Duzib248G0829 Durio zibethinus HOM05D004123 ORTHO05D004768 2.6e-31 139.4 167 52.1
HanXRQChr09g0252701 Helianthus annuus HOM05D004123 ORTHO05D004768 3.4e-31 139.0 168 52.4
Potri.010G124200 Populus trichocarpa HOM05D004123 ORTHO05D004768 3.4e-31 139.0 170 51.2
Nn3g17856 Nelumbo nucifera HOM05D004123 ORTHO05D004768 1.4e-29 133.7 178 50.0
Potri.008G121200 Populus trichocarpa HOM05D004123 ORTHO05D004768 4.2e-29 132.1 171 49.7
Sed0009095 Sechium edule HOM05D004123 ORTHO05D004768 4.2e-29 132.1 169 49.1
Oeu043592.1 Olea europaea HOM05D004123 ORTHO05D004768 3.5e-28 129.0 167 53.9
Dinv31634 Davidia involucrata HOM05D004123 ORTHO05D004768 6.0e-28 128.3 166 51.2
Oeu034240.1 Olea europaea HOM05D004123 ORTHO05D004768 2.3e-27 126.3 176 50.6
Cpa.g.sc350.1 Carica papaya HOM05D004123 ORTHO05D004768 3.0e-27 125.9 172 53.5
Manes.06G067400 Manihot esculenta HOM05D004123 ORTHO05D004768 3.9e-27 125.6 176 50.0
Sabra08G0091900 Salix brachista HOM05D004123 ORTHO05D004768 8.7e-27 124.4 171 46.2
Cfa018590 Carpinus fangiana HOM05D004123 ORTHO05D004768 1.5e-26 123.6 166 50.6
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 5.6e-26 121.7 175 49.1
FAN07G2244 Fragaria x ananassa HOM05D004123 ORTHO05D004768 5.6e-26 121.7 182 47.3
HanXRQChr08g0213911 Helianthus annuus HOM05D004123 ORTHO05D004768 5.6e-26 121.7 162 49.4
QL01p041642 Quercus lobata HOM05D004123 ORTHO05D004768 5.6e-26 121.7 174 51.1
MSTRG.13535 Avicennia marina HOM05D004123 ORTHO05D004768 7.4e-26 121.3 166 50.0
MSTRG.844 Avicennia marina HOM05D004123 ORTHO05D004768 9.6e-26 120.9 180 49.4
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 9.6e-26 120.9 174 48.9
FvH4_4g27300 Fragaria vesca HOM05D004123 ORTHO05D004768 9.6e-26 120.9 179 48.0
Actinidia14896 Actinidia chinensis HOM05D004123 ORTHO05D004768 2.1e-25 119.8 176 47.7
CiPaw.15G085900 Carya illinoinensis HOM05D004123 ORTHO05D004768 2.1e-25 119.8 186 45.2
Peaxi162Scf00382g00826 Petunia axillaris HOM05D004123 ORTHO05D004768 2.1e-25 119.8 83 79.5
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 2.1e-25 119.8 159 50.9
FAN12G0145 Fragaria x ananassa HOM05D004123 ORTHO05D004768 2.8e-25 119.4 179 47.5
FAN12G0921 Fragaria x ananassa HOM05D004123 ORTHO05D004768 2.8e-25 119.4 179 47.5
GSVIVG01011890001 Vitis vinifera HOM05D004123 ORTHO05D004768 2.8e-25 119.4 125 57.6
Lj6C757T7 Lonicera japonica HOM05D004123 ORTHO05D004768 4.8e-25 118.6 174 51.1
TAR622G0492 Trochodendron aralioides HOM05D004123 ORTHO05D004768 4.8e-25 118.6 187 48.1
vmacro10561 Vaccinium macrocarpon HOM05D004123 ORTHO05D004768 1.8e-24 116.7 170 49.4
CiPaw.16G065300 Carya illinoinensis HOM05D004123 ORTHO05D004768 2.4e-24 116.3 176 50.0
Prupe.1G311900 Prunus persica HOM05D004123 ORTHO05D004768 4.0e-24 115.5 175 48.0
Lsat_1_v5_gn_3_59041 Lactuca sativa HOM05D004123 ORTHO05D004768 5.3e-24 115.2 167 47.3
Manes.14G103000 Manihot esculenta HOM05D004123 ORTHO05D004768 5.3e-24 115.2 173 49.1
Haze_17490 Corylus avellana HOM05D004123 ORTHO05D004768 6.9e-24 114.8 161 48.4
ClCG03G009600 Citrullus lanatus HOM05D004123 ORTHO05D004768 2.0e-23 113.2 179 46.9
Ciclev10018307m.g Citrus clementina HOM05D004123 ORTHO05D004768 2.0e-23 113.2 182 48.4
VMungo0720G2589 Vigna mungo HOM05D004123 ORTHO05D004768 4.5e-23 112.1 176 45.5
MD13G1040900 Malus domestica HOM05D004123 ORTHO05D004768 1.3e-22 110.5 169 49.1
SalBow8G0349 Salvia bowleyana HOM05D004123 ORTHO05D004768 3.8e-22 109.0 154 47.4
Phvul.007G027700 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 4.9e-22 108.6 177 45.8
Aqoxy3G00286 Aquilegia oxysepala HOM05D004123 ORTHO05D004768 8.4e-22 107.8 170 48.8
Glyma.10G273800 Glycine max HOM05D004123 ORTHO05D004768 8.4e-22 107.8 176 46.0
Cc11_g10070 Coffea canephora HOM05D004123 ORTHO05D004768 1.1e-21 107.5 128 54.7
MD16G1042200 Malus domestica HOM05D004123 ORTHO05D004768 1.1e-21 107.5 164 46.3
TWI31G0276 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 5.5e-21 105.1 170 44.1
Gohir.D02G170500 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.6e-20 103.6 170 47.6
RcHm_v2.0_Chr4g0435091 Rosa chinensis HOM05D004123 ORTHO05D004768 1.6e-20 103.6 182 45.1
Lj2g0014688 Lotus japonicus HOM05D004123 ORTHO05D004768 2.1e-20 103.2 157 45.2
PGR119G1213 Punica granatum HOM05D004123 ORTHO05D004768 2.1e-20 103.2 159 46.5
CANSAT01G1980 Cannabis sativa HOM05D004123 ORTHO05D004768 2.7e-20 102.8 163 41.1
Gorai.005G191500 Gossypium raimondii HOM05D004123 ORTHO05D004768 4.6e-20 102.1 170 47.6
Gohir.A03G147300 Gossypium hirsutum HOM05D004123 ORTHO05D004768 7.9e-20 101.3 170 48.2
Lalb_Chr02g0145931 Lupinus albus HOM05D004123 ORTHO05D004768 1.3e-19 100.5 180 46.1
TAR374G0469 Trochodendron aralioides HOM05D004123 ORTHO05D004768 2.3e-19 99.8 167 43.7
Lalb_Chr21g0308891 Lupinus albus HOM05D004123 ORTHO05D004768 3.0e-19 99.4 178 42.7
Migut.L01390 Erythranthe guttata HOM05D004123 ORTHO05D004768 8.7e-19 97.8 172 40.1
SalBow8G0756 Salvia bowleyana HOM05D004123 ORTHO05D004768 1.5e-18 97.1 179 42.5
Dinv21080 Davidia involucrata HOM05D004123 ORTHO05D004768 4.3e-18 95.5 136 52.9
Psat6g227440 Pisum sativum HOM05D004123 ORTHO05D004768 5.7e-18 95.1 165 46.1
COL.COLO4_03992 Corchorus olitorius HOM05D004123 ORTHO05D004768 2.8e-17 92.8 149 45.6
CDE12G0443 Ceratophyllum demersum HOM05D004123 ORTHO05D004768 3.7e-17 92.4 168 39.3
Nn4g23857 Nelumbo nucifera HOM05D004123 ORTHO05D004768 3.7e-17 92.4 199 43.2
Sed0004295 Sechium edule HOM05D004123 ORTHO05D004768 4.8e-17 92.0 156 44.9
Medtr1g110710 Medicago truncatula HOM05D004123 ORTHO05D004768 1.1e-16 90.9 171 42.7
FAN22G2099 Fragaria x ananassa HOM05D004123 ORTHO05D004768 1.8e-16 90.1 199 40.2
TPR.G18823 Trifolium pratense HOM05D004123 ORTHO05D004768 1.8e-16 90.1 170 41.8
Lj5g0023256 Lotus japonicus HOM05D004123 ORTHO05D004768 2.4e-16 89.7 157 43.3
unitig_747.g21201 Utricularia gibba HOM05D004123 ORTHO05D004768 3.1e-16 89.4 158 46.2
DCAR_026735 Daucus carota HOM05D004123 ORTHO05D004768 2.0e-15 86.7 173 48.6
SHI16201 Sapria himalayana HOM05D004123 ORTHO05D004768 4.5e-15 85.5 170 38.2
Lj5g0020149 Lotus japonicus HOM05D004123 ORTHO05D004768 1.7e-14 83.6 170 41.8
Eucgr.G02316 Eucalyptus grandis HOM05D004123 ORTHO05D004768 2.2e-14 83.2 180 42.2
Ca_03055_v3 Cicer arietinum L. HOM05D004123 ORTHO05D004768 2.9e-14 82.8 162 42.0
PSO063G6205 Papaver somniferum HOM05D004123 ORTHO05D004768 3.8e-14 82.4 164 40.9
PSO782G4509 Papaver somniferum HOM05D004123 ORTHO05D004768 3.2e-13 79.3 164 39.0
TWI75G1885 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 3.2e-13 79.3 168 41.1
unitig_22.g6557 Utricularia gibba HOM05D004123 ORTHO05D004768 2.7e-12 76.3 177 36.2
Lsat_1_v5_gn_8_41281 Lactuca sativa HOM05D004123 ORTHO05D004768 4.6e-12 75.5 129 44.2
ATR1125G037 Amborella trichopoda HOM05D004123 ORTHO05D004768 1.0e-11 74.3 133 41.4
Aa31sc366G10 Aethionema arabicum HOM05D004123 ORTHO05D004768 5.1e-11 72.0 155 38.1
unitig_8.g3254 Utricularia gibba HOM05D004123 ORTHO05D004768 8.7e-11 71.2 195 36.4
DCAR_007247 Daucus carota HOM05D004123 ORTHO05D004768 7.4e-10 68.2 161 39.1
Phvul.003G031000 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 1.3e-09 67.4 177 37.3
Thhalv10019033m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 1.6e-09 67.0 160 40.0
THA.LOC104805006 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 2.8e-09 66.2 154 41.6
AL2G27340 Arabidopsis lyrata HOM05D004123 ORTHO05D004768 4.8e-09 65.5 159 42.1
AT1G68480 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 4.8e-09 65.5 158 44.3
CSS0040364 Camellia sinensis var. sinensis HOM05D004123 ORTHO05D004768 1.1e-08 64.3 171 35.1
arahy.Tifrunner.gnm1.ann1.A2D7P4 Arachis hypogaea HOM05D004123 ORTHO05D004768 1.4e-08 63.9 169 37.3
BcaB03g13142 Brassica carinata HOM05D004123 ORTHO05D004768 1.8e-08 63.5 151 39.7
Thhalv10009343m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 1.8e-08 63.5 155 36.1
VMungo1215G3079 Vigna mungo HOM05D004123 ORTHO05D004768 1.8e-08 63.5 189 37.0
C02p24750 Brassica napus HOM05D004123 ORTHO05D004768 3.1e-08 62.8 158 39.2
BolC2t08567H Brassica oleracea HOM05D004123 ORTHO05D004768 3.1e-08 62.8 158 39.2
BraA02t06569Z Brassica rapa HOM05D004123 ORTHO05D004768 5.3e-08 62.0 174 37.4
Glyma.20G116200 Glycine max HOM05D004123 ORTHO05D004768 5.3e-08 62.0 176 35.8
Sp5g23550 Schrenkiella parvula HOM05D004123 ORTHO05D004768 1.2e-07 60.8 160 38.1
CARHR061260 Cardamine hirsuta HOM05D004123 ORTHO05D004768 2.0e-07 60.1 157 40.1
Carub.0002s1499 Capsella rubella HOM05D004123 ORTHO05D004768 2.6e-07 59.7 160 40.0
THA.LOC104805254 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 3.4e-07 59.3 160 33.8
AT1G13400 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 4.5e-07 58.9 152 33.6
Lalb_Chr10g0100051 Lupinus albus HOM05D004123 ORTHO05D004768 4.5e-07 58.9 171 37.4
ECA233G4816 Erigeron canadensis HOM05D004123 ORTHO05D004768 5.9e-07 58.5 129 38.0
A02p15050 Brassica napus HOM05D004123 ORTHO05D004768 7.7e-07 58.2 172 36.6
BcaC07g38691 Brassica carinata HOM05D004123 ORTHO05D004768 1.3e-06 57.4 152 34.9
Ca_11169_v3 Cicer arietinum L. HOM05D004123 ORTHO05D004768 1.7e-06 57.0 174 33.9
Migut.E00347 Erythranthe guttata HOM05D004123 ORTHO05D004768 1.7e-06 57.0 74 48.6
ECA233G4891 Erigeron canadensis HOM05D004123 ORTHO05D004768 3.8e-06 55.8 140 37.1
arahy.Tifrunner.gnm1.ann1.U1U6XH Arachis hypogaea HOM05D004123 ORTHO05D004768 8.5e-06 54.7 179 37.4


User provided reference genes

Program Settings