Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-149 532.7 308 100.0
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-81 305.8 306 60.1
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-74 284.3 360 53.3
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-72 277.3 388 48.2
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-72 276.6 435 47.6
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-72 276.2 443 49.7
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-71 273.9 353 55.0
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-62 244.6 405 47.7
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.9e-62 243.0 427 44.3
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.5e-62 241.9 431 41.8
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-59 234.2 339 49.6
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.4e-58 229.2 357 49.9
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-55 221.1 176 79.0
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.0e-54 215.7 285 51.6
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.5e-53 212.2 228 56.1
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-49 199.9 184 72.8
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-49 199.9 307 47.2
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.3e-49 198.4 285 52.3
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-48 197.2 324 53.1
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.5e-46 188.3 169 76.3
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.2e-45 186.4 157 73.9
Nitab4.5_0000682g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-45 186.0 132 76.5
Nitab4.5_0001653g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-43 181.4 189 56.6
Nitab4.5_0000776g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-43 181.0 183 58.5
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-41 172.9 161 79.5
Nitab4.5_0000965g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.0e-39 167.2 410 40.0
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-39 166.4 279 43.7
Nitab4.5_0002026g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-39 166.4 110 80.9
Nitab4.5_0000073g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.5e-39 166.0 110 80.9
Nitab4.5_0022071g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.7e-39 165.2 160 62.5
Nitab4.5_0000529g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-38 162.9 171 60.2
Nitab4.5_0009435g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.2e-37 158.7 122 73.0
Nitab4.5_0000270g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.5e-37 158.3 221 52.5
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-36 157.5 213 50.2
Nitab4.5_0000901g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-36 157.5 306 46.7
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.6e-34 150.2 103 76.7
Nitab4.5_0000248g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-31 140.2 167 53.9
Nitab4.5_0001996g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-27 127.1 117 64.1
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-25 120.9 285 35.1
Nitab4.5_0002026g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.9e-25 120.2 97 69.1
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.3e-25 118.6 98 70.4
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 6.0e-23 112.5 105 61.0
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 7.8e-23 112.1 298 36.2
Nitab4.5_0001817g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-22 111.7 418 33.0
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-22 110.9 59 93.2
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 5.0e-22 109.4 111 53.2
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 6.6e-22 109.0 111 52.3
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 1.1e-21 108.2 111 53.2
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.9e-21 107.5 109 56.9
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 4.3e-21 106.3 111 53.2
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.3e-21 106.3 112 54.5
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-21 105.5 101 55.4
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 9.5e-21 105.1 111 52.3
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 2.8e-20 103.6 287 35.9
Nitab4.5_0004685g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.7e-20 102.8 123 52.0
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.2e-20 102.4 58 89.7
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 6.2e-20 102.4 103 56.3
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-19 100.9 56 85.7
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 1.8e-19 100.9 91 58.2
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.1e-19 100.1 110 56.4
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 5.2e-19 99.4 111 50.5
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 6.8e-19 99.0 99 58.6
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 6.8e-19 99.0 102 56.9
Peaxi162Scf00385g00063 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-18 96.7 127 46.5
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.4e-18 96.7 110 54.5
Nitab4.5_0000337g0280 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.4e-18 96.3 101 66.3
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 4.4e-18 96.3 81 60.5
Nitab4.5_0008332g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.8e-18 95.9 63 79.4
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 5.8e-18 95.9 102 50.0
Nitab4.5_0009435g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-17 94.0 102 57.8
Nitab4.5_0011105g0030 Nicotiana tabacum HOM05D003329 ORTHO05D000013 2.9e-17 93.6 109 52.3
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.4e-17 92.4 62 75.8
Nitab4.5_0002477g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.4e-17 92.4 205 36.6
Nitab4.5_0001696g0150 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-16 90.5 131 45.8
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 2.4e-16 90.5 102 49.0
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 7.0e-16 89.0 106 50.9
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.7e-15 87.0 104 51.9
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 3.5e-15 86.7 86 55.8
Nitab4.5_0005015g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.0e-15 85.9 97 55.7
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 1.7e-14 84.3 97 51.5
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.7e-14 84.3 98 51.0
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 2.3e-14 84.0 128 40.6
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 3.9e-14 83.2 127 40.9
Peaxi162Scf01414g00018 Petunia axillaris HOM05D003329 ORTHO05D006664 3.9e-14 83.2 128 40.6
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 5.1e-14 82.8 343 33.8
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.6e-14 82.0 78 52.6
Nitab4.5_0000329g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-13 81.3 203 36.0
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 7.3e-13 79.0 406 27.8
Nitab4.5_0003338g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.3e-13 79.0 46 78.3
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-13 79.0 127 40.2
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 2.8e-12 77.0 64 57.8
Nitab4.5_0001433g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.7e-12 76.3 71 52.1
Peaxi162Scf00178g00072 Petunia axillaris HOM05D003329 ORTHO05D006664 6.2e-12 75.9 80 50.0
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 8.1e-12 75.5 117 40.2
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.1e-12 75.5 58 65.5
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 1.8e-11 74.3 74 45.9
Nitab4.5_0005696g0060 Nicotiana tabacum HOM05D003329 ORTHO05D015718 6.8e-11 72.4 112 38.4
Peaxi162Scf00174g00315 Petunia axillaris HOM05D003329 ORTHO05D001349 1.5e-10 71.2 77 42.9
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 2.6e-10 70.5 72 56.9
Nitab4.5_0008743g0020 Nicotiana tabacum HOM05D003329 ORTHO05D015718 2.6e-10 70.5 188 30.3
Peaxi162Scf00098g00068 Petunia axillaris HOM05D003329 ORTHO05D015718 2.6e-10 70.5 84 52.4
Peaxi162Scf00107g01612 Petunia axillaris HOM05D003329 ORTHO05D001349 4.4e-10 69.7 111 39.6
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-10 69.7 82 51.2
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 7.5e-10 68.9 95 44.2
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.5e-10 68.9 56 64.3
Nitab4.5_0002980g0070 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.9e-10 68.6 57 68.4
Nitab4.5_0000061g0190 Nicotiana tabacum HOM05D003329 ORTHO05D001349 1.3e-09 68.2 100 39.0
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 2.2e-09 67.4 84 48.8
Nitab4.5_0003152g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 3.7e-09 66.6 281 27.8
Nitab4.5_0012182g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 4.9e-09 66.2 180 30.6
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 8.3e-09 65.5 54 55.6
Nitab4.5_0001696g0160 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-08 64.7 34 88.2
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 2.4e-08 63.9 79 40.5
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 5.4e-08 62.8 97 39.2
Nitab4.5_0001309g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.1e-08 62.4 78 79.5
Nitab4.5_0001794g0070 Nicotiana tabacum HOM05D003329 ORTHO05D015718 7.1e-08 62.4 113 35.4
Nitab4.5_0002850g0070 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.1e-08 62.4 54 46.3
Peaxi162Scf00031g00088 Petunia axillaris HOM05D003329 ORTHO05D001349 7.1e-08 62.4 84 44.0
Peaxi162Scf00130g00316 Petunia axillaris HOM05D003329 ORTHO05D006664 9.2e-08 62.0 55 58.2
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 9.2e-08 62.0 94 39.4
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 9.2e-08 62.0 94 39.4
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 9.2e-08 62.0 94 39.4
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 1.2e-07 61.6 58 53.4
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 1.6e-07 61.2 96 43.8
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 1.6e-07 61.2 86 40.7
Nitab4.5_0012245g0060 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.1e-07 60.8 364 26.4
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.1e-07 60.8 92 39.1
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 6.0e-07 59.3 94 38.3
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.8e-07 58.9 71 45.1
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.8e-07 58.9 78 42.3
Nitab4.5_0009003g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.0e-06 58.5 96 38.5
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 1.0e-06 58.5 75 41.3
Nitab4.5_0001065g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-06 58.2 36 75.0
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.3e-06 58.2 97 39.2
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-06 57.8 87 40.2
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.3e-06 57.4 94 38.3
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 3.0e-06 57.0 94 37.2
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.0e-06 57.0 97 34.0
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 3.9e-06 56.6 116 31.9
CAN.G1572.5 Capsicum annuum HOM05D003329 ORTHO05D006664 5.1e-06 56.2 99 40.4
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.6e-06 55.8 78 41.0
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.6e-06 55.8 87 39.1
Nitab4.5_0000944g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.6e-06 55.8 79 39.2
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.6e-06 55.8 83 41.0
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 6.6e-06 55.8 85 38.8
Nitab4.5_0000437g0220 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.6e-06 55.5 70 47.1


User provided reference genes

Program Settings