Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.4e-59 233.0 143 100.0
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.9e-19 99.8 160 56.9
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 4.1e-19 98.6 160 57.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 3.9e-17 92.0 157 57.3
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 4.4e-13 78.6 123 51.2
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 9.9e-13 77.4 146 56.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.3e-09 67.0 154 48.1
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 2.3e-09 66.2 155 46.5
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 8.6e-09 64.3 114 47.4
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.9e-08 63.2 112 46.4
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 3.3e-08 62.4 153 43.1
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 5.6e-08 61.6 159 43.4
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 5.6e-08 61.6 116 40.5
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.6e-08 61.6 115 39.1
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 7.3e-08 61.2 157 44.6
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 7.3e-08 61.2 102 43.1
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 7.3e-08 61.2 111 41.4
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 7.3e-08 61.2 155 40.6
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.2e-07 60.5 163 35.6
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 2.8e-07 59.3 161 43.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 2.8e-07 59.3 111 41.4
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 4.7e-07 58.5 160 41.2
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 8.1e-07 57.8 157 42.7
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 1.1e-06 57.4 121 38.0
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.1e-06 57.4 109 42.2
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 1.4e-06 57.0 113 36.3
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.8e-06 56.6 112 42.9
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 1.8e-06 56.6 103 41.7
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.8e-06 56.6 115 36.5
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 2.4e-06 56.2 116 42.2
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 3.1e-06 55.8 118 40.7
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 3.1e-06 55.8 146 42.5
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 4.0e-06 55.5 105 40.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 5.2e-06 55.1 105 41.9
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 5.2e-06 55.1 160 42.5
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 6.8e-06 54.7 118 39.0
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 6.8e-06 54.7 118 39.0
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 6.8e-06 54.7 118 41.5
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 6.8e-06 54.7 119 39.5
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 6.8e-06 54.7 121 42.1
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.9e-06 54.3 159 43.4
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.9e-06 54.3 160 43.8
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 8.9e-06 54.3 115 41.7


User provided reference genes

Program Settings