Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.6e-184 649.4 367 100.0
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 4.1e-156 555.1 367 81.7
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 2.1e-155 552.7 365 81.9
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 1.5e-153 546.6 365 84.4
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 1.1e-151 540.4 345 85.5
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 1.7e-149 533.1 340 84.4
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.9e-148 529.6 342 84.5
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 1.3e-146 523.5 336 85.7
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 2.5e-145 519.2 346 82.1
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 2.5e-145 519.2 346 81.2
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 3.3e-145 518.8 335 83.9
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 4.3e-145 518.5 340 82.9
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 4.3e-145 518.5 343 81.6
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 5.6e-145 518.1 336 83.6
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 9.6e-145 517.3 343 81.3
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 8.1e-144 514.2 344 82.0
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 4.0e-143 511.9 336 81.2
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 5.2e-143 511.5 324 84.3
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 3.2e-140 502.3 341 81.2
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 9.3e-140 500.7 333 79.3
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 9.3e-140 500.7 337 83.1
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 1.6e-139 500.0 344 80.5
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 1.7e-138 496.5 336 79.8
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 2.3e-138 496.1 322 82.9
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 2.3e-138 496.1 339 80.8
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 3.0e-138 495.7 344 77.9
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 8.7e-138 494.2 340 78.5
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.1e-137 493.8 327 82.3
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 1.9e-137 493.0 341 80.1
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 3.3e-137 492.3 327 81.7
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 5.6e-137 491.5 337 79.2
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 4.8e-136 488.4 341 75.4
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 4.8e-136 488.4 341 79.2
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 6.2e-136 488.0 313 84.0
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 1.8e-135 486.5 344 78.2
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.4e-135 486.1 314 82.8
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 6.9e-135 484.6 343 76.1
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 9.0e-135 484.2 341 78.3
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 1.2e-134 483.8 344 76.2
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 2.0e-134 483.0 337 77.7
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 2.6e-134 482.6 371 72.2
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 4.5e-134 481.9 333 80.2
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 7.6e-134 481.1 343 76.4
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 7.6e-134 481.1 371 72.2
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 1.3e-133 480.3 345 75.4
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 1.7e-133 479.9 364 73.9
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-133 479.9 344 75.6
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 2.2e-133 479.6 343 77.3
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 3.8e-133 478.8 337 77.2
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 4.9e-133 478.4 340 77.9
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 6.4e-133 478.0 328 77.7
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 6.4e-133 478.0 344 77.6
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 8.4e-133 477.6 327 78.0
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 8.4e-133 477.6 340 75.9
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.1e-132 477.2 335 76.4
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 1.9e-132 476.5 323 79.3
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 1.9e-132 476.5 339 72.3
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 1.9e-132 476.5 362 74.3
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 5.4e-132 474.9 344 75.6
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.3e-132 474.2 339 75.5
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 9.3e-132 474.2 332 76.2
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 9.3e-132 474.2 368 70.9
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 1.6e-131 473.4 342 76.3
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 3.5e-131 472.2 332 75.9
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 4.6e-131 471.9 335 77.9
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.6e-131 471.9 337 75.1
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 6.0e-131 471.5 341 75.7
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 6.0e-131 471.5 341 75.7
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 7.9e-131 471.1 340 75.6
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 7.9e-131 471.1 329 78.7
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.0e-130 470.7 342 75.1
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 1.8e-130 469.9 340 75.3
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 2.3e-130 469.5 325 78.5
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 3.0e-130 469.2 335 76.7
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 3.0e-130 469.2 335 76.4
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 3.0e-130 469.2 335 76.4
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 3.9e-130 468.8 339 76.4
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 3.9e-130 468.8 326 76.7
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 3.9e-130 468.8 326 78.8
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 8.7e-130 467.6 335 77.0
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 8.7e-130 467.6 331 76.4
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 8.7e-130 467.6 335 77.0
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.1e-129 467.2 339 76.1
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.1e-129 467.2 340 75.3
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.1e-129 467.2 339 76.1
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 1.1e-129 467.2 335 76.7
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.5e-129 466.8 335 76.7
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 1.5e-129 466.8 335 75.8
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 5.6e-129 464.9 346 72.8
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 7.4e-129 464.5 332 77.1
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 9.6e-129 464.2 335 76.4
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 1.3e-128 463.8 335 75.5
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 2.1e-128 463.0 336 74.7
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 2.8e-128 462.6 335 75.5
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 2.8e-128 462.6 330 76.1
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 2.8e-128 462.6 371 70.4
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 2.8e-128 462.6 340 74.7
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 2.8e-128 462.6 332 77.1
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 3.1e-127 459.1 329 74.8
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 4.0e-127 458.8 321 77.9
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 1.2e-126 457.2 342 73.4
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 1.2e-126 457.2 340 72.9
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 2.0e-126 456.4 338 71.9
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 2.6e-126 456.1 328 73.8
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 3.4e-126 455.7 342 73.1
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 9.9e-126 454.1 335 73.1
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 6.4e-125 451.4 338 71.0
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 6.7e-122 441.4 327 75.2
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 8.7e-122 441.0 326 72.7
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 3.1e-119 432.6 345 69.0
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 9.0e-119 431.0 345 68.7
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 1.5e-118 430.3 345 68.7
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 6.7e-114 414.8 332 68.7
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 1.9e-113 413.3 337 68.2
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 1.6e-112 410.2 336 68.5
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 6.3e-112 408.3 371 60.1
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 1.4e-111 407.1 341 70.1
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 5.1e-106 388.7 317 70.7
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 1.8e-103 380.2 339 67.6
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 1.3e-101 374.0 324 63.3
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 1.4e-100 370.5 322 62.7
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.4e-100 370.5 346 59.2
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 2.3e-98 363.2 247 81.4
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 2.0e-97 360.1 264 75.4
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 7.4e-97 358.2 332 61.4
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 1.0e-93 347.8 243 79.4
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 8.5e-93 344.7 339 57.2
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.5e-89 334.0 297 58.9
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 2.0e-89 333.6 255 71.4
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 1.2e-86 324.3 317 58.0
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 2.6e-86 323.2 206 78.2
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 5.5e-84 315.5 330 56.1
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.0e-82 309.7 337 53.7
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 5.9e-78 295.4 332 56.6
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 5.5e-68 262.3 231 59.3
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 4.4e-65 252.7 208 66.8
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.2e-54 218.0 208 55.3
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 2.8e-51 206.8 130 81.5
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 4.1e-47 193.0 164 61.0
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 7.1e-39 165.6 114 73.7
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 7.3e-36 155.6 100 78.0
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 8.1e-35 152.1 164 55.5
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 1.4e-34 151.4 90 82.2
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 1.3e-32 144.8 95 76.8
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 2.7e-30 137.1 128 60.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.8e-26 124.4 282 33.3
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 1.5e-25 121.3 91 64.8
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 1.1e-23 115.2 78 74.4
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 7.3e-20 102.4 89 56.2
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 3.6e-19 100.1 66 75.8
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 3.6e-19 100.1 78 60.3
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.8e-18 97.8 102 49.0
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 4.0e-18 96.7 86 55.8
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 4.5e-17 93.2 92 56.5
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 5.4e-15 86.3 317 31.5
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 5.1e-13 79.7 168 38.1
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 2.1e-11 74.3 62 66.1
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 2.8e-11 73.9 59 61.0
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.0e-10 70.1 50 64.0
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 3.4e-09 67.0 178 33.7
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 7.6e-09 65.9 54 61.1
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 9.9e-09 65.5 43 69.8
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-08 64.7 46 65.2
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.2e-08 64.3 76 47.4
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.2e-08 64.3 76 47.4
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.9e-08 63.9 43 65.1
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.8e-08 63.5 47 63.8
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 8.4e-08 62.4 67 76.1
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 4.2e-07 60.1 65 50.8
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.2e-07 60.1 46 63.0
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 1.2e-06 58.5 65 49.2
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.2e-06 58.5 46 58.7
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 3.5e-06 57.0 43 65.1


User provided reference genes

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