Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.7e-206 721.8 385 100.0
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.4e-183 646.4 387 91.2
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 4.8e-163 578.2 386 83.2
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.8e-162 576.2 386 82.6
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 3.4e-161 572.0 386 82.1
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 1.7e-160 569.7 374 83.4
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 3.1e-138 495.7 368 76.6
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 5.8e-100 368.6 348 60.3
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 5.4e-98 362.1 393 54.2
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 6.6e-96 355.1 450 50.9
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 2.5e-95 353.2 424 52.6
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.6e-94 350.5 447 48.5
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 6.2e-94 348.6 392 53.6
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.0e-92 343.6 373 56.8
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 7.5e-92 341.7 453 50.8
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 4.9e-91 339.0 456 48.5
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 4.9e-91 339.0 420 51.4
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 9.2e-90 334.7 409 50.4
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.0e-88 331.3 435 49.7
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 1.7e-88 330.5 333 58.0
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 3.0e-88 329.7 420 49.8
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.5e-87 327.4 405 51.4
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 2.5e-87 326.6 441 49.7
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 4.3e-87 325.9 442 48.9
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 5.6e-87 325.5 420 49.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 7.3e-87 325.1 416 49.5
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 2.8e-86 323.2 445 47.6
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 6.2e-86 322.0 411 49.1
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 8.1e-86 321.6 354 54.5
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.1e-85 321.2 420 49.3
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 3.1e-85 319.7 447 49.2
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 3.1e-85 319.7 464 46.3
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 7.6e-84 315.1 411 49.6
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 3.8e-83 312.8 364 53.0
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 4.9e-83 312.4 406 50.7
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 4.9e-83 312.4 257 64.6
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 2.4e-82 310.1 363 51.2
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 2.4e-82 310.1 457 46.0
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.2e-82 309.7 440 46.6
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 4.1e-82 309.3 468 45.1
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 5.4e-82 308.9 363 52.3
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 5.4e-82 308.9 444 46.4
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 1.6e-81 307.4 431 47.8
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 6.0e-81 305.4 444 45.7
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.3e-80 304.3 359 50.4
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.7e-80 303.9 397 47.4
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 1.7e-80 303.9 428 48.6
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.5e-79 300.8 386 51.0
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 2.5e-79 300.1 355 50.7
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 3.3e-79 299.7 429 46.9
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 1.2e-78 297.7 340 50.6
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.2e-78 297.7 357 50.4
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 2.1e-78 297.0 385 49.9
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 3.6e-78 296.2 410 44.6
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 4.7e-78 295.8 446 48.2
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 4.7e-78 295.8 407 47.4
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.8e-77 293.9 437 48.1
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 1.8e-77 293.9 330 52.4
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 1.8e-77 293.9 433 47.3
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 4.0e-77 292.7 386 47.9
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 1.5e-76 290.8 218 68.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 2.6e-76 290.0 350 50.3
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 2.6e-76 290.0 350 50.3
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 4.4e-76 289.3 340 50.0
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 5.8e-76 288.9 345 50.4
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 5.8e-76 288.9 318 51.9
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 7.6e-76 288.5 387 48.8
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 9.9e-76 288.1 245 60.4
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 9.9e-76 288.1 342 52.0
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.9e-76 288.1 329 51.7
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 1.3e-75 287.7 441 46.7
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 1.1e-74 284.6 344 48.3
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.4e-74 283.5 360 50.3
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.2e-74 282.7 440 45.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 4.2e-74 282.7 324 51.2
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 3.5e-73 279.6 372 47.8
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 4.6e-73 279.3 241 61.0
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 7.8e-73 278.5 254 59.4
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.3e-72 277.7 349 49.3
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 2.3e-72 276.9 348 49.1
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 3.9e-72 276.2 346 49.4
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 8.7e-72 275.0 249 60.2
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 2.5e-71 273.5 417 45.6
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 8.1e-70 268.5 312 52.9
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 1.1e-69 268.1 354 50.6
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 4.5e-68 262.7 349 47.0
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 4.5e-68 262.7 333 47.7
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 1.6e-65 254.2 432 43.5
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 4.6e-65 252.7 230 58.7
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 2.1e-62 243.8 419 39.1
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.5e-60 236.1 407 43.0
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 6.4e-59 232.3 275 50.2
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.2e-57 228.0 405 38.8
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 3.5e-57 226.5 335 44.2
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.3e-55 219.9 147 74.8
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 5.8e-52 209.1 331 44.7
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 6.5e-51 205.7 356 37.4
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.6e-49 201.1 161 63.4
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.0e-48 198.4 280 47.1
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.3e-48 198.0 380 36.3
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.8e-48 197.6 276 40.9
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 2.5e-47 193.7 183 50.3
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 4.8e-46 189.5 252 42.9
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 2.4e-45 187.2 224 48.7
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.9e-45 185.7 122 70.5
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.2e-42 176.4 123 69.1
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 6.7e-40 169.1 386 31.6
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 2.0e-31 141.0 232 41.8
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 2.8e-30 137.1 192 50.0
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.3e-29 132.9 127 56.7
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 2.5e-26 124.0 155 42.6
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 3.5e-20 103.6 305 34.4
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 5.0e-19 99.8 175 40.0
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 6.5e-19 99.4 86 60.5
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 8.5e-19 99.0 272 30.9
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 3.2e-18 97.1 78 64.1
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 2.7e-17 94.0 208 31.7
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 1.2e-09 68.6 255 32.9
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 4.0e-08 63.5 110 42.7
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 8.3e-06 55.8 74 51.4


User provided reference genes

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