Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000775g0160 Nicotiana tabacum HOM05D022064 ORTHO05D286162 2.0e-40 168.7 89 100.0
Nitab4.5_0011368g0040 Nicotiana tabacum HOM05D022064 ORTHO05D282794 1.9e-30 135.6 89 85.4
PGSC0003DMG400032228 Solanum tuberosum HOM05D001193 ORTHO05D001016 2.7e-24 115.2 73 83.6
Solyc01g006050.2 Solanum lycopersicum HOM05D001193 ORTHO05D001016 1.7e-23 112.5 73 86.3
CAN.G158.1 Capsicum annuum HOM05D001193 ORTHO05D001016 1.5e-22 109.4 73 79.5
Sopen01g002050 Solanum pennellii HOM05D001193 ORTHO05D001016 9.4e-22 106.7 73 82.2
Peaxi162Scf00100g00063 Petunia axillaris HOM05D001193 ORTHO05D001016 6.3e-18 94.0 73 78.1
Nitab4.5_0001620g0090 Nicotiana tabacum HOM05D022064 ORTHO05D283734 4.7e-13 77.8 79 57.0
Peaxi162Scf00100g00091 Petunia axillaris HOM05D001193 ORTHO05D001016 5.7e-11 70.9 67 56.7
Peaxi162Scf00100g00410 Petunia axillaris HOM05D001193 ORTHO05D001016 2.8e-10 68.6 67 55.2
Peaxi162Scf00100g00513 Petunia axillaris HOM05D001193 ORTHO05D001016 2.8e-10 68.6 67 55.2
Oeu046519.1 Olea europaea HOM05D001193 ORTHO05D001016 1.8e-09 65.9 76 56.6
PGSC0003DMG400018930 Solanum tuberosum HOM05D001193 ORTHO05D001016 2.0e-08 62.4 64 57.8
Sopen01g013830 Solanum pennellii HOM05D001193 ORTHO05D001016 1.0e-07 60.1 65 60.0
CiPaw.13G172700 Carya illinoinensis HOM05D001193 ORTHO05D001016 1.3e-07 59.7 78 48.7
Solyc01g017600.3 Solanum lycopersicum HOM05D001193 ORTHO05D001016 2.3e-07 58.9 64 59.4
Nitab4.5_0000775g0190 Nicotiana tabacum HOM05D022064 ORTHO05D284489 2.9e-07 58.5 82 48.8
QL01p010431 Quercus lobata HOM05D001193 ORTHO05D001016 5.0e-07 57.8 72 47.2
Glyma.07G256300 Glycine max HOM05D001193 ORTHO05D001016 8.6e-07 57.0 76 44.7
MD03G1010400 Malus domestica HOM05D001193 ORTHO05D001016 8.6e-07 57.0 76 48.7
Nitab4.5_0000488g0030 Nicotiana tabacum HOM05D001193 ORTHO05D001016 8.6e-07 57.0 62 58.1
CiPaw.14G133700 Carya illinoinensis HOM05D001193 ORTHO05D001016 1.1e-06 56.6 78 53.8
DCAR_017676 Daucus carota HOM05D001193 ORTHO05D001016 1.1e-06 56.6 73 49.3
CAN.G917.3 Capsicum annuum HOM05D001193 ORTHO05D001016 1.5e-06 56.2 63 54.0
CiPaw.14G133800 Carya illinoinensis HOM05D001193 ORTHO05D001016 1.5e-06 56.2 78 53.8
Nitab4.5_0002733g0050 Nicotiana tabacum HOM05D001193 ORTHO05D001016 1.9e-06 55.8 63 54.0
FAN21G3972 Fragaria x ananassa HOM05D001193 ORTHO05D001016 3.3e-06 55.1 76 48.7
Lsat_1_v5_gn_6_52561 Lactuca sativa HOM05D001193 ORTHO05D001016 3.3e-06 55.1 71 53.5
Oeu030969.1 Olea europaea HOM05D001193 ORTHO05D001016 3.3e-06 55.1 73 47.9
Cc01_g01530 Coffea canephora HOM05D001193 ORTHO05D001016 4.3e-06 54.7 73 50.7
FvH4_3g44810 Fragaria vesca HOM05D001193 ORTHO05D001016 4.3e-06 54.7 76 48.7
FAN11G3039 Fragaria x ananassa HOM05D001193 ORTHO05D001016 4.3e-06 54.7 76 48.7
MSTRG.18859 Avicennia marina HOM05D001193 ORTHO05D001016 5.6e-06 54.3 79 53.2
CSS0013003 Camellia sinensis var. sinensis HOM05D001193 ORTHO05D001016 5.6e-06 54.3 76 53.9
Migut.D02534 Erythranthe guttata HOM05D001193 ORTHO05D001016 5.6e-06 54.3 69 50.7
Potri.003G216500 Populus trichocarpa HOM05D001193 ORTHO05D001016 5.6e-06 54.3 78 44.9
FAN25G1836 Fragaria x ananassa HOM05D001193 ORTHO05D001016 7.3e-06 53.9 76 47.4
Peaxi162Scf78515g00001 Petunia axillaris HOM05D001193 ORTHO05D001016 7.3e-06 53.9 46 58.7


User provided reference genes

Program Settings