Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000769g0080 Nicotiana tabacum HOM05D003342 ORTHO05D003861 1.1e-78 296.6 146 100.0
Nitab4.5_0001146g0050 Nicotiana tabacum HOM05D003342 ORTHO05D003861 4.3e-56 221.5 132 84.8
Nitab4.5_0005672g0050 Nicotiana tabacum HOM05D003342 ORTHO05D003861 1.4e-54 216.5 124 87.1
Nitab4.5_0004288g0060 Nicotiana tabacum HOM05D003342 ORTHO05D003861 9.0e-54 213.8 132 82.6
PGSC0003DMG400032232 Solanum tuberosum HOM05D003342 ORTHO05D003861 2.9e-52 208.8 144 73.6
CAN.G1236.10 Capsicum annuum HOM05D003342 ORTHO05D003861 4.6e-50 201.4 146 69.9
Peaxi162Scf00192g00028 Petunia axillaris HOM05D003342 ORTHO05D003861 6.7e-49 197.6 134 76.1
Solyc01g006380.2 Solanum lycopersicum HOM05D003342 ORTHO05D003861 7.4e-32 141.0 117 65.0
Sopen01g002370 Solanum pennellii HOM05D003342 ORTHO05D003861 7.4e-32 141.0 117 66.7
Atru.chr3.2403 Acer truncatum HOM05D003342 ORTHO05D003861 4.1e-22 108.6 130 46.9
QL01p009789 Quercus lobata HOM05D003342 ORTHO05D003861 4.5e-21 105.1 129 46.5
Ciclev10018144m.g Citrus clementina HOM05D003342 ORTHO05D003861 5.9e-21 104.8 120 47.5
Oeu013923.1 Olea europaea HOM05D003342 ORTHO05D003861 2.9e-20 102.4 126 45.2
COL.COLO4_10424 Corchorus olitorius HOM05D003342 ORTHO05D003861 3.8e-20 102.1 121 47.1
Manes.03G090300 Manihot esculenta HOM05D003342 ORTHO05D003861 1.9e-19 99.8 131 43.5
Duzib168G0297 Durio zibethinus HOM05D003342 ORTHO05D003861 2.5e-19 99.4 129 47.3
Eucgr.J00838 Eucalyptus grandis HOM05D003342 ORTHO05D003861 4.2e-19 98.6 122 45.1
Actinidia01840 Actinidia chinensis HOM05D003342 ORTHO05D003861 6.1e-18 94.7 131 43.5
FAN16G2442 Fragaria x ananassa HOM05D003342 ORTHO05D003861 6.1e-18 94.7 126 42.9
Cpa.g.sc235.20 Carica papaya HOM05D003342 ORTHO05D003861 1.0e-17 94.0 143 38.5
TWI34G0480 Tripterygium wilfordii HOM05D003342 ORTHO05D003861 1.0e-17 94.0 127 40.9
TPR.G15635 Trifolium pratense HOM05D003342 ORTHO05D003861 1.4e-17 93.6 128 45.3
Prupe.6G014500 Prunus persica HOM05D003342 ORTHO05D003861 2.3e-17 92.8 132 45.5
Lj2C672T9 Lonicera japonica HOM05D003342 ORTHO05D003861 3.0e-17 92.4 90 56.7
RcHm_v2.0_Chr5g0080651 Rosa chinensis HOM05D003342 ORTHO05D003861 3.9e-17 92.0 142 40.8
Thecc.09G217800 Theobroma cacao HOM05D003342 ORTHO05D003861 3.9e-17 92.0 104 50.0
GSVIVG01025363001 Vitis vinifera HOM05D003342 ORTHO05D003861 3.9e-17 92.0 128 43.0
Cc01_g03630 Coffea canephora HOM05D003342 ORTHO05D003861 5.2e-17 91.7 108 47.2
VMungo1383G2641 Vigna mungo HOM05D003342 ORTHO05D003861 5.2e-17 91.7 137 42.3
FvH4_3g44280 Fragaria vesca HOM05D003342 ORTHO05D003861 6.7e-17 91.3 126 41.3
FAN11G2771 Fragaria x ananassa HOM05D003342 ORTHO05D003861 6.7e-17 91.3 126 41.3
FAN21G2328 Fragaria x ananassa HOM05D003342 ORTHO05D003861 6.7e-17 91.3 126 41.3
Medtr7g005940 Medicago truncatula HOM05D003342 ORTHO05D003861 6.7e-17 91.3 129 43.4
Psat6g142720 Pisum sativum HOM05D003342 ORTHO05D003861 1.1e-16 90.5 126 42.1
Phvul.008G002200 Phaseolus vulgaris HOM05D003342 ORTHO05D003861 2.0e-16 89.7 131 42.0
PSO384G3101 Papaver somniferum HOM05D003342 ORTHO05D003861 2.6e-16 89.4 96 49.0
Aqoxy148s006 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.3e-16 89.0 85 55.3
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.3e-16 89.0 85 55.3
FAN25G0020 Fragaria x ananassa HOM05D003342 ORTHO05D003861 5.7e-16 88.2 126 41.3
Glyma.08G361400 Glycine max HOM05D003342 ORTHO05D003861 7.4e-16 87.8 129 39.5
Sabra03G0159800 Salix brachista HOM05D003342 ORTHO05D003861 7.4e-16 87.8 90 53.3
Potri.001G012300 Populus trichocarpa HOM05D003342 ORTHO05D003861 1.7e-15 86.7 79 57.0
Glyma.18G300300 Glycine max HOM05D003342 ORTHO05D003861 2.2e-15 86.3 129 41.1
Hma1.2p1_0972F.1_g242980 Hydrangea macrophylla HOM05D003342 ORTHO05D003861 2.2e-15 86.3 127 40.2
Hma1.2p1_1806F.1_g303280 Hydrangea macrophylla HOM05D003342 ORTHO05D003861 2.2e-15 86.3 127 40.2
TAR636G0676 Trochodendron aralioides HOM05D003342 ORTHO05D003861 2.8e-15 85.9 138 41.3
Gorai.010G127500 Gossypium raimondii HOM05D003342 ORTHO05D003861 3.7e-15 85.5 127 40.9
vmacro22153 Vaccinium macrocarpon HOM05D003342 ORTHO05D003861 8.2e-15 84.3 94 48.9
Potri.003G214100 Populus trichocarpa HOM05D003342 ORTHO05D003861 1.1e-14 84.0 127 41.7
Sabra01G0009100 Salix brachista HOM05D003342 ORTHO05D003861 1.1e-14 84.0 79 55.7
Gohir.A06G102400 Gossypium hirsutum HOM05D003342 ORTHO05D003861 1.4e-14 83.6 137 40.1
ECA238G1888 Erigeron canadensis HOM05D003342 ORTHO05D003861 3.1e-14 82.4 96 47.9
Gohir.D06G111900 Gossypium hirsutum HOM05D003342 ORTHO05D003861 3.1e-14 82.4 124 42.7
Lsat_1_v5_gn_2_101261 Lactuca sativa HOM05D003342 ORTHO05D003861 5.3e-14 81.6 127 43.3
Lj1g0005480 Lotus japonicus HOM05D003342 ORTHO05D003861 7.0e-14 81.3 129 38.8
MD11G1016300 Malus domestica HOM05D003342 ORTHO05D003861 1.2e-13 80.5 88 51.1
DCAR_002025 Daucus carota HOM05D003342 ORTHO05D003861 2.0e-13 79.7 107 43.9
CiPaw.13G170300 Carya illinoinensis HOM05D003342 ORTHO05D003861 3.5e-13 79.0 129 38.0
Rhsim13G0227200 Rhododendron simsii HOM05D003342 ORTHO05D003861 5.9e-13 78.2 132 36.4
vmacro21754 Vaccinium macrocarpon HOM05D003342 ORTHO05D003861 5.9e-13 78.2 144 40.3
MBI08_g23102_MAGBIO Magnolia biondii HOM05D003342 ORTHO05D003861 7.7e-13 77.8 89 49.4
HanXRQChr14g0452921 Helianthus annuus HOM05D003342 ORTHO05D003861 1.7e-12 76.6 128 37.5
Nn2g15685 Nelumbo nucifera HOM05D003342 ORTHO05D003861 1.5e-11 73.6 131 42.0
ATR0807G180 Amborella trichopoda HOM05D003342 ORTHO05D003861 4.2e-11 72.0 91 46.2
HPP92_005109 Vanilla planifolia HOM05D003342 ORTHO05D003861 7.2e-11 71.2 107 39.3
ECA248G1312 Erigeron canadensis HOM05D003342 ORTHO05D003861 9.4e-11 70.9 92 42.4
Dinv36323 Davidia involucrata HOM05D003342 ORTHO05D003861 3.6e-10 68.9 126 36.5
Dinv08066 Davidia involucrata HOM05D003342 ORTHO05D003861 6.1e-10 68.2 126 36.5
Lj1A446T11 Lonicera japonica HOM05D003342 ORTHO05D003861 8.0e-10 67.8 106 38.7
Actinidia16279 Actinidia chinensis HOM05D003342 ORTHO05D003861 1.4e-09 67.0 41 68.3
MELO3C015664.2 Cucumis melo HOM05D003342 ORTHO05D003861 6.7e-09 64.7 130 37.7
Sed0010857 Sechium edule HOM05D003342 ORTHO05D003861 1.5e-08 63.5 127 38.6
CsaV3_1G042310 Cucumis sativus L. HOM05D003342 ORTHO05D003861 2.6e-08 62.8 136 35.3
Nn7g38045 Nelumbo nucifera HOM05D003342 ORTHO05D003861 4.4e-08 62.0 89 41.6
MBI06_g13581_MAGBIO Magnolia biondii HOM05D003342 ORTHO05D003861 7.5e-08 61.2 87 43.7
Lju445A3G11 Lonicera japonica HOM05D003342 ORTHO05D003861 1.3e-07 60.5 106 39.6
arahy.Tifrunner.gnm1.ann1.8PZ4ND Arachis hypogaea HOM05D003342 ORTHO05D003861 1.7e-07 60.1 127 32.3
arahy.Tifrunner.gnm1.ann1.QA8QB9 Arachis hypogaea HOM05D003342 ORTHO05D003861 1.7e-07 60.1 127 32.3
Sed0003897 Sechium edule HOM05D003342 ORTHO05D003861 2.2e-07 59.7 74 39.2
Gohir.D05G146500 Gossypium hirsutum HOM05D003342 ORTHO05D003861 2.8e-07 59.3 88 36.4
Gorai.009G150300 Gossypium raimondii HOM05D003342 ORTHO05D003861 2.8e-07 59.3 88 36.4
Ca_06526_v3 Cicer arietinum L. HOM05D003342 ORTHO05D003861 3.7e-07 58.9 122 33.6
MBI18_g29067_MAGBIO Magnolia biondii HOM05D003342 ORTHO05D003861 3.7e-07 58.9 73 43.8
TWI38G0600 Tripterygium wilfordii HOM05D003342 ORTHO05D003861 3.7e-07 58.9 77 40.3
ClCG03G013770 Citrullus lanatus HOM05D003342 ORTHO05D003861 4.8e-07 58.5 138 35.5
Rhsim05G0030700 Rhododendron simsii HOM05D003342 ORTHO05D003861 4.8e-07 58.5 89 38.2
Lj2A354T56 Lonicera japonica HOM05D003342 ORTHO05D003861 6.3e-07 58.2 75 42.7
Migut.M01962 Erythranthe guttata HOM05D003342 ORTHO05D003861 8.2e-07 57.8 109 34.9
GSVIVG01026271001 Vitis vinifera HOM05D003342 ORTHO05D003861 1.1e-06 57.4 91 37.4
MSTRG.16333 Avicennia marina HOM05D003342 ORTHO05D003861 1.8e-06 56.6 59 47.5
ClCG01G009040 Citrullus lanatus HOM05D003342 ORTHO05D003861 1.8e-06 56.6 74 43.2
COL.COLO4_30947 Corchorus olitorius HOM05D003342 ORTHO05D003861 1.8e-06 56.6 76 39.5
Potri.015G117300 Populus trichocarpa HOM05D003342 ORTHO05D003861 2.4e-06 56.2 74 40.5
MELO3C021793.2 Cucumis melo HOM05D003342 ORTHO05D003861 3.1e-06 55.8 75 42.7
TAR626G1885 Trochodendron aralioides HOM05D003342 ORTHO05D003861 3.1e-06 55.8 87 40.2
Thecc.06G137300 Theobroma cacao HOM05D003342 ORTHO05D003861 4.1e-06 55.5 88 33.0
Gohir.A05G144100 Gossypium hirsutum HOM05D003342 ORTHO05D003861 5.3e-06 55.1 88 35.2
Actinidia22376 Actinidia chinensis HOM05D003342 ORTHO05D003861 7.0e-06 54.7 90 36.7
Aqoxy1G01497 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 7.0e-06 54.7 74 37.8
CsaV3_1G046650 Cucumis sativus L. HOM05D003342 ORTHO05D003861 7.0e-06 54.7 101 37.6
DCAR_004317 Daucus carota HOM05D003342 ORTHO05D003861 7.0e-06 54.7 110 30.9
Oeu000470.1 Olea europaea HOM05D003342 ORTHO05D003861 9.1e-06 54.3 79 39.2


User provided reference genes

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