Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.4e-62 241.5 122 100.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 7.5e-46 187.2 143 68.5
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.2e-45 185.7 143 68.5
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.9e-45 184.5 143 67.1
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.1e-44 183.3 143 67.1
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.9e-44 182.6 143 66.4
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 2.5e-41 172.2 143 63.6
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 4.3e-41 171.4 127 68.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.6e-40 169.5 143 62.9
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.8e-40 168.7 143 60.1
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.4e-39 166.4 143 59.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.8e-39 166.0 143 62.2
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.8e-39 166.0 143 60.8
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 4.0e-39 164.9 143 59.4
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 8.9e-39 163.7 143 58.0
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.2e-38 163.3 143 59.4
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 3.4e-38 161.8 143 58.7
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.4e-38 161.8 143 63.6
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 4.4e-38 161.4 143 60.8
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 5.8e-38 161.0 143 57.3
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 5.8e-38 161.0 144 59.0
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 9.9e-38 160.2 143 58.7
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.9e-38 160.2 143 58.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 9.9e-38 160.2 143 57.3
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.3e-37 159.8 143 54.5
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.7e-37 159.5 143 60.1
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.2e-37 159.1 143 60.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.2e-37 159.1 143 59.4
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 2.9e-37 158.7 142 59.9
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.9e-37 158.7 143 58.0
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 3.7e-37 158.3 143 55.9
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 3.7e-37 158.3 143 56.6
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 3.7e-37 158.3 143 58.7
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 8.3e-37 157.1 143 59.4
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.9e-36 156.0 143 57.3
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.9e-36 156.0 143 57.3
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.9e-36 156.0 143 57.3
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 1.9e-36 156.0 143 59.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 2.4e-36 155.6 142 60.6
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 2.4e-36 155.6 143 55.2
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 4.1e-36 154.8 143 58.0
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 5.4e-36 154.5 143 56.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 9.2e-36 153.7 142 58.5
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 2.1e-35 152.5 143 54.5
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 2.7e-35 152.1 142 52.1
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 3.5e-35 151.8 143 54.5
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 4.6e-35 151.4 142 56.3
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 4.6e-35 151.4 141 60.3
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.0e-34 150.2 143 55.9
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.3e-34 149.8 143 55.9
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.7e-34 149.4 143 58.0
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.3e-34 149.1 143 56.6
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.3e-34 149.1 143 56.6
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 3.0e-34 148.7 143 53.1
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 3.9e-34 148.3 142 58.5
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 5.1e-34 147.9 142 54.9
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 5.1e-34 147.9 143 57.3
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 5.1e-34 147.9 142 58.5
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 6.6e-34 147.5 142 54.9
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 6.6e-34 147.5 142 58.5
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 6.6e-34 147.5 142 54.2
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 8.6e-34 147.1 143 53.1
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 8.6e-34 147.1 143 53.8
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.5e-33 146.4 142 54.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 1.5e-33 146.4 142 54.9
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.9e-33 146.0 143 53.8
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.9e-33 146.0 143 55.2
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 3.3e-33 145.2 143 57.3
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 3.3e-33 145.2 143 54.5
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.3e-33 144.8 143 52.4
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 4.3e-33 144.8 142 54.9
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 7.3e-33 144.1 143 51.7
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 9.6e-33 143.7 142 54.9
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.6e-32 142.9 142 54.2
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.6e-32 142.9 143 54.5
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.6e-32 142.9 144 53.5
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 4.7e-32 141.4 144 54.2
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 6.2e-32 141.0 142 52.1
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.8e-31 139.4 143 51.7
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.4e-31 139.0 143 49.0
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 3.1e-31 138.7 143 53.1
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 3.1e-31 138.7 143 53.1
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 3.1e-31 138.7 140 54.3
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 3.1e-31 138.7 143 51.0
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.0e-31 138.3 143 51.7
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 4.0e-31 138.3 142 55.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 5.2e-31 137.9 143 52.4
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 5.2e-31 137.9 142 51.4
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 6.8e-31 137.5 143 51.7
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 6.8e-31 137.5 142 54.2
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.2e-30 136.7 143 51.7
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.5e-30 136.3 143 49.0
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 3.2e-28 128.6 119 58.8
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.2e-27 126.7 100 60.0
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 3.0e-26 122.1 143 47.6
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 2.5e-25 119.0 157 43.9
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 1.3e-24 116.7 143 44.8
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.6e-24 116.3 143 44.1
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.6e-24 116.3 143 44.1
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 4.8e-24 114.8 143 41.3
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 5.3e-23 111.3 105 58.1
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.2e-21 105.9 120 52.5
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 2.9e-21 105.5 143 41.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.2e-19 100.1 71 70.4
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.6e-17 91.3 52 88.5
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 9.6e-17 90.5 120 45.8
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 5.3e-15 84.7 107 42.1
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 9.0e-15 84.0 86 48.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 5.8e-14 81.3 91 48.4
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.4e-12 75.9 91 45.1
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.0e-10 68.9 91 46.2
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 2.5e-09 65.9 117 41.9
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 2.1e-08 62.8 78 38.5
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.8e-06 54.7 40 60.0


User provided reference genes

Program Settings