Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000757g0070 Nicotiana tabacum HOM05D010939 ORTHO05D013055 5.1e-89 331.3 192 100.0
Nitab4.5_0000757g0080 Nicotiana tabacum HOM05D010939 ORTHO05D013055 8.1e-87 323.9 171 98.2
Nitab4.5_0024229g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.7e-68 263.1 150 86.0
Nitab4.5_0003936g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 2.3e-57 226.1 169 70.4
Nitab4.5_0007363g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 5.7e-56 221.5 166 73.5
Nitab4.5_0000238g0030 Nicotiana tabacum HOM05D010939 ORTHO05D013055 2.0e-48 196.4 171 68.4
CAN.G36.6 Capsicum annuum HOM05D010939 ORTHO05D013055 4.1e-46 188.7 137 66.4
Peaxi162Scf00013g00055 Petunia axillaris HOM05D010939 ORTHO05D013055 4.4e-40 168.7 136 64.7
Nitab4.5_0000238g0020 Nicotiana tabacum HOM05D010939 ORTHO05D013055 9.7e-40 167.5 118 70.3
PGSC0003DMG400031548 Solanum tuberosum HOM05D010939 ORTHO05D013055 1.6e-37 160.2 172 53.5
Peaxi162Scf00196g00211 Petunia axillaris HOM05D010939 ORTHO05D013055 4.2e-35 152.1 145 57.9
CAN.G36.7 Capsicum annuum HOM05D010939 ORTHO05D013055 1.2e-34 150.6 172 51.2
CAN.G36.8 Capsicum annuum HOM05D010939 ORTHO05D013055 1.4e-33 147.1 140 55.7
Peaxi162Scf00196g00224 Petunia axillaris HOM05D010939 ORTHO05D013055 1.4e-33 147.1 166 51.8
Sopen01g001430 Solanum pennellii HOM05D010939 ORTHO05D013055 3.7e-31 139.0 172 49.4
CAN.G36.9 Capsicum annuum HOM05D010939 ORTHO05D013055 3.1e-30 136.0 141 52.5
Solyc01g005420.2 Solanum lycopersicum HOM05D010939 ORTHO05D013055 5.3e-30 135.2 171 49.1
PGSC0003DMG400009734 Solanum tuberosum HOM05D010939 ORTHO05D013055 9.5e-19 97.8 64 68.8
Oeu030040.1 Olea europaea HOM05D000865 ORTHO05D000739 8.9e-17 91.3 140 39.3
Oeu017725.1 Olea europaea HOM05D000865 ORTHO05D000739 9.8e-16 87.8 139 37.4
Cc10_g10870 Coffea canephora HOM05D000865 ORTHO05D000739 8.3e-15 84.7 134 40.3
Cc10_g10850 Coffea canephora HOM05D000865 ORTHO05D000739 3.1e-14 82.8 137 38.7
SalBow7G1730 Salvia bowleyana HOM05D000865 ORTHO05D000739 7.0e-14 81.6 143 35.7
GSVIVG01037484001 Vitis vinifera HOM05D000865 ORTHO05D000739 2.7e-13 79.7 145 36.6
SalBow7G3635 Salvia bowleyana HOM05D000865 ORTHO05D000739 7.8e-13 78.2 142 34.5
Dinv27368 Davidia involucrata HOM05D000865 ORTHO05D000739 1.0e-12 77.8 142 37.3
SGA_v2.0_scaffold25G11102 Striga asiatica HOM05D000865 ORTHO05D000739 1.0e-12 77.8 151 34.4
Dinv27367 Davidia involucrata HOM05D000865 ORTHO05D000739 2.9e-12 76.3 147 36.1
Hma1.2p1_0009F.1_g006160 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 3.8e-12 75.9 141 36.2
Oeu017726.1 Olea europaea HOM05D000865 ORTHO05D000739 6.6e-12 75.1 137 36.5
Dinv27365 Davidia involucrata HOM05D000865 ORTHO05D000739 8.6e-12 74.7 103 41.7
Dinv27366 Davidia involucrata HOM05D000865 ORTHO05D000739 8.6e-12 74.7 103 41.7
CSS0024986 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 1.1e-11 74.3 141 34.8
Lj4g0012125 Lotus japonicus HOM05D000865 ORTHO05D000739 1.1e-11 74.3 145 33.8
SalBow6G3095 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.5e-11 73.2 147 36.1
DCAR_014116 Daucus carota HOM05D000865 ORTHO05D000739 3.3e-11 72.8 142 34.5
Cc00_g25620 Coffea canephora HOM05D000865 ORTHO05D000739 4.3e-11 72.4 143 34.3
Peaxi162Scf00014g00113 Petunia axillaris HOM05D000865 ORTHO05D000739 4.3e-11 72.4 145 33.8
Hma1.2p1_0009F.1_g006170 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 5.6e-11 72.0 142 35.9
Lsat_1_v5_gn_8_103180 Lactuca sativa HOM05D000865 ORTHO05D000739 5.6e-11 72.0 145 33.1
Actinidia14181 Actinidia chinensis HOM05D000865 ORTHO05D000739 9.5e-11 71.2 167 31.1
Migut.C01169 Erythranthe guttata HOM05D000865 ORTHO05D000739 9.5e-11 71.2 146 32.2
Nitab4.5_0000051g0380 Nicotiana tabacum HOM05D000865 ORTHO05D000739 9.5e-11 71.2 145 33.8
Actinidia02602 Actinidia chinensis HOM05D000865 ORTHO05D000739 1.2e-10 70.9 141 35.5
Actinidia04740 Actinidia chinensis HOM05D000865 ORTHO05D000739 1.2e-10 70.9 167 31.1
CAN.G392.2 Capsicum annuum HOM05D000865 ORTHO05D000739 1.2e-10 70.9 145 34.5
Dinv27369 Davidia involucrata HOM05D000865 ORTHO05D000739 1.2e-10 70.9 146 35.6
ECA236G0710 Erigeron canadensis HOM05D000865 ORTHO05D000739 1.2e-10 70.9 145 33.8
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 1.6e-10 70.5 143 37.8
Nn4g25895 Nelumbo nucifera HOM05D000865 ORTHO05D000739 2.8e-10 69.7 144 36.1
Peaxi162Scf00028g00117 Petunia axillaris HOM05D000865 ORTHO05D000739 2.8e-10 69.7 135 36.3
Dinv27362 Davidia involucrata HOM05D000865 ORTHO05D000739 3.6e-10 69.3 99 41.4
CAN.G903.3 Capsicum annuum HOM05D000865 ORTHO05D000739 4.7e-10 68.9 145 33.8
Dinv27360 Davidia involucrata HOM05D000865 ORTHO05D000739 4.7e-10 68.9 104 38.5
Migut.C01170 Erythranthe guttata HOM05D000865 ORTHO05D000739 4.7e-10 68.9 153 31.4
Oeu030038.1 Olea europaea HOM05D000865 ORTHO05D000739 4.7e-10 68.9 145 33.1
Solyc11g013250.1 Solanum lycopersicum HOM05D000865 ORTHO05D000739 4.7e-10 68.9 145 33.1
Sopen11g008270 Solanum pennellii HOM05D000865 ORTHO05D000739 4.7e-10 68.9 145 33.1
SalBow7G1372 Salvia bowleyana HOM05D000865 ORTHO05D000739 8.0e-10 68.2 103 37.9
Migut.B01030 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.0e-09 67.8 140 33.6
Migut.N03305 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.4e-09 67.4 141 33.3
Lj7C325T4 Lonicera japonica HOM05D000865 ORTHO05D000739 1.4e-09 67.4 92 40.2
Peaxi162Scf00014g00122 Petunia axillaris HOM05D000865 ORTHO05D000739 1.4e-09 67.4 145 32.4
SalBow7G2794 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.3e-09 66.6 103 37.9
Cc00_g10490 Coffea canephora HOM05D000865 ORTHO05D000739 5.2e-09 65.5 136 31.6
PGSC0003DMG400029026 Solanum tuberosum HOM05D000865 ORTHO05D000739 5.2e-09 65.5 145 32.4
Migut.N03304 Erythranthe guttata HOM05D000865 ORTHO05D000739 6.8e-09 65.1 99 35.4
SalBow7G0931 Salvia bowleyana HOM05D000865 ORTHO05D000739 6.8e-09 65.1 145 32.4
SalBow7G3084 Salvia bowleyana HOM05D000865 ORTHO05D000739 6.8e-09 65.1 145 32.4
SalBow7G3275 Salvia bowleyana HOM05D000865 ORTHO05D000739 6.8e-09 65.1 94 34.0
Dinv30152 Davidia involucrata HOM05D000865 ORTHO05D000739 8.9e-09 64.7 160 31.2
Migut.N03306 Erythranthe guttata HOM05D000865 ORTHO05D000739 8.9e-09 64.7 146 30.8
Migut.N03310 Erythranthe guttata HOM05D000865 ORTHO05D000739 8.9e-09 64.7 99 36.4
Nn4g25897 Nelumbo nucifera HOM05D000865 ORTHO05D000739 8.9e-09 64.7 144 32.6
Hma1.2p1_0009F.1_g006150 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 1.2e-08 64.3 99 38.4
Lj7P327T2 Lonicera japonica HOM05D000865 ORTHO05D000739 1.5e-08 63.9 138 31.9
Oeu040760.1 Olea europaea HOM05D000865 ORTHO05D000739 2.0e-08 63.5 141 31.2
SalBow7G1104 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.6e-08 63.2 97 38.1
SalBow7G1310 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.6e-08 63.2 97 38.1
Lj7P314T10 Lonicera japonica HOM05D000865 ORTHO05D000739 4.4e-08 62.4 101 34.7
Oeu051839.1 Olea europaea HOM05D000865 ORTHO05D000739 4.4e-08 62.4 141 30.5
Os01g0369500 Oryza sativa ssp. japonica HOM05D000865 ORTHO05D000739 4.4e-08 62.4 143 32.9
Lj7P324T13 Lonicera japonica HOM05D000865 ORTHO05D000739 5.8e-08 62.0 101 34.7
RcHm_v2.0_Chr3g0455361 Rosa chinensis HOM05D000865 ORTHO05D000739 5.8e-08 62.0 142 33.1
Dinv30153 Davidia involucrata HOM05D000865 ORTHO05D000739 7.5e-08 61.6 159 31.4
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 9.8e-08 61.2 140 33.6
Lj7C326T3 Lonicera japonica HOM05D000865 ORTHO05D000739 1.3e-07 60.8 138 34.1
Lj7P326T18 Lonicera japonica HOM05D000865 ORTHO05D000739 1.3e-07 60.8 138 34.1
Oeu030041.1 Olea europaea HOM05D000865 ORTHO05D000739 1.3e-07 60.8 98 37.8
Lj7P315T8 Lonicera japonica HOM05D000865 ORTHO05D000739 1.7e-07 60.5 96 38.5
ATR0706G083 Amborella trichopoda HOM05D000865 ORTHO05D000739 2.2e-07 60.1 144 33.3
CSS0039085 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 2.2e-07 60.1 96 36.5
Lj7P316T4 Lonicera japonica HOM05D000865 ORTHO05D000739 2.2e-07 60.1 96 38.5
MD12G1216300 Malus domestica HOM05D000865 ORTHO05D000739 2.2e-07 60.1 152 32.2
Rhsim02G0009700 Rhododendron simsii HOM05D000407 ORTHO05D000739 2.2e-07 60.1 142 30.3
Rhsim02G0010800 Rhododendron simsii HOM05D000407 ORTHO05D000739 2.2e-07 60.1 142 30.3
TWI12G0999 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 2.9e-07 59.7 159 28.9
Hma1.2p1_0402F.1_g145130 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 3.7e-07 59.3 132 34.1
Sabra05G0032000 Salix brachista HOM05D000865 ORTHO05D000739 3.7e-07 59.3 147 33.3
CANSAT25G3656 Cannabis sativa HOM05D000865 ORTHO05D000739 4.9e-07 58.9 148 28.4
Medtr2g033730 Medicago truncatula HOM05D000865 ORTHO05D000739 4.9e-07 58.9 141 31.9
PGSC0003DMG400031547 Solanum tuberosum HOM05D010939 ORTHO05D013055 4.9e-07 58.9 38 71.1
AL1G19510 Arabidopsis lyrata HOM05D000865 ORTHO05D000739 6.4e-07 58.5 147 30.6
Carub.0001s0839 Capsella rubella HOM05D000865 ORTHO05D000739 6.4e-07 58.5 142 31.0
Dinv20011 Davidia involucrata HOM05D000039 ORTHO05D000366 8.3e-07 58.2 65 49.2
Gohir.D12G010000 Gossypium hirsutum HOM05D000865 ORTHO05D000739 8.3e-07 58.2 144 30.6
Gorai.008G010000 Gossypium raimondii HOM05D000865 ORTHO05D000739 8.3e-07 58.2 144 30.6
Rhsim05G0141500 Rhododendron simsii HOM05D000865 ORTHO05D000739 8.3e-07 58.2 137 33.6
Rhsim02G0009800 Rhododendron simsii HOM05D000865 ORTHO05D000739 1.1e-06 57.8 142 29.6
Lj7P324T10 Lonicera japonica HOM05D000865 ORTHO05D000739 1.4e-06 57.4 88 35.2
Prupe.6G322500 Prunus persica HOM05D000865 ORTHO05D000739 1.4e-06 57.4 144 29.2
Actinidia09155 Actinidia chinensis HOM05D038971 ORTHO05D000739 2.4e-06 56.6 88 39.8
MSTRG.1475 Avicennia marina HOM05D000865 ORTHO05D000739 2.4e-06 56.6 145 29.7
Lj7C313T0 Lonicera japonica HOM05D000865 ORTHO05D000739 2.4e-06 56.6 85 37.6
Lj7P326T15 Lonicera japonica HOM05D000865 ORTHO05D000739 2.4e-06 56.6 90 41.1
Lj7P326T21 Lonicera japonica HOM05D000865 ORTHO05D000739 2.4e-06 56.6 90 41.1
unitig_52.g17111 Utricularia gibba HOM05D000865 ORTHO05D000739 2.4e-06 56.6 141 31.9
Thhalv10008221m.g Eutrema salsugineum HOM05D000865 ORTHO05D000739 3.2e-06 56.2 143 29.4
Lj7P315T14 Lonicera japonica HOM05D000865 ORTHO05D000739 3.2e-06 56.2 85 37.6
Sp7g14070 Schrenkiella parvula HOM05D000865 ORTHO05D000739 3.2e-06 56.2 134 33.6
Aa31sc55G160 Aethionema arabicum HOM05D000865 ORTHO05D000739 4.1e-06 55.8 148 29.7
Gohir.A12G009950 Gossypium hirsutum HOM05D000865 ORTHO05D000739 4.1e-06 55.8 143 28.7
CDE02G1898 Ceratophyllum demersum HOM05D000865 ORTHO05D000739 5.4e-06 55.5 134 29.9
TAR362G0271 Trochodendron aralioides HOM05D000865 ORTHO05D000739 5.4e-06 55.5 139 32.4
BolC8t52496H Brassica oleracea HOM05D000865 ORTHO05D000739 9.2e-06 54.7 144 30.6
Lj7P326T27 Lonicera japonica HOM05D000865 ORTHO05D000739 9.2e-06 54.7 85 36.5


User provided reference genes

Program Settings