Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000755g0260 Nicotiana tabacum HOM05D002954 ORTHO05D015034 3.7e-80 301.6 164 100.0
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.2e-34 148.3 116 70.7
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 4.3e-28 128.6 136 54.4
PGSC0003DMG400007737 Solanum tuberosum HOM05D002131 ORTHO05D015034 7.5e-25 117.9 129 52.7
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.7e-24 116.7 121 51.2
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.7e-24 116.7 128 49.2
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.4e-24 114.8 131 52.7
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.6e-21 104.8 122 55.7
Nitab4.5_0000062g0230 Nicotiana tabacum HOM05D002954 ORTHO05D015034 1.9e-20 103.2 116 50.9
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.8e-19 99.4 130 42.3
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.2e-19 98.2 105 52.4
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 1.2e-17 94.0 119 44.5
CAN.G831.2 Capsicum annuum HOM05D002954 ORTHO05D003353 4.4e-17 92.0 96 51.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 2.2e-16 89.7 131 41.2
Nitab4.5_0016071g0020 Nicotiana tabacum HOM05D002954 ORTHO05D015034 3.5e-14 82.4 44 90.9
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-13 79.7 112 39.3
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 6.6e-13 78.2 112 39.3
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 8.7e-13 77.8 130 36.9
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 7.3e-12 74.7 112 37.5
arahy.Tifrunner.gnm1.ann1.IEL8E2 Arachis hypogaea HOM05D002954 ORTHO05D003353 4.7e-11 72.0 118 36.4
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 8.1e-11 71.2 130 33.8
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 1.8e-10 70.1 119 35.3
arahy.Tifrunner.gnm1.ann1.41X87M Arachis hypogaea HOM05D009662 ORTHO05D003353 2.4e-10 69.7 146 34.2
arahy.Tifrunner.gnm1.ann1.XG7NYG Arachis hypogaea HOM05D009662 ORTHO05D003353 2.4e-10 69.7 141 35.5
arahy.Tifrunner.gnm1.ann1.2WW1WS Arachis hypogaea HOM05D009662 ORTHO05D003353 3.1e-10 69.3 141 35.5
arahy.Tifrunner.gnm1.ann1.NBL2GQ Arachis hypogaea HOM05D009662 ORTHO05D003353 3.1e-10 69.3 141 35.5
arahy.Tifrunner.gnm1.ann1.4EB8G0 Arachis hypogaea HOM05D009662 ORTHO05D003353 6.9e-10 68.2 141 34.8
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 6.9e-10 68.2 123 35.0
arahy.Tifrunner.gnm1.ann1.1S2QVS Arachis hypogaea HOM05D009662 ORTHO05D003353 9.0e-10 67.8 141 34.8
arahy.Tifrunner.gnm1.ann1.VKQ8LP Arachis hypogaea HOM05D009662 ORTHO05D003353 1.5e-09 67.0 141 34.8
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-09 66.2 165 32.7
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 2.6e-09 66.2 138 34.8
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 5.8e-09 65.1 131 31.3
arahy.Tifrunner.gnm1.ann1.D1MK81 Arachis hypogaea HOM05D002954 ORTHO05D003353 7.6e-09 64.7 108 36.1
Solyc12g019450.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.6e-09 64.7 130 34.6
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 9.9e-09 64.3 101 37.6
arahy.Tifrunner.gnm1.ann1.JC8RXL Arachis hypogaea HOM05D009662 ORTHO05D003353 9.9e-09 64.3 146 34.2
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 9.9e-09 64.3 109 34.9
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 9.9e-09 64.3 121 35.5
Nitab4.5_0000693g0060 Nicotiana tabacum HOM05D002954 ORTHO05D015034 2.2e-08 63.2 66 54.5
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 2.2e-08 63.2 44 63.6
Sopen04g009500 Solanum pennellii HOM05D022806 ORTHO05D030645 2.2e-08 63.2 139 33.8
Solyc05g042010.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.1e-07 60.8 138 33.3
Sopen09g012940 Solanum pennellii HOM05D009662 ORTHO05D000034 1.1e-07 60.8 119 31.1
Nitab4.5_0000456g0080 Nicotiana tabacum HOM05D002954 ORTHO05D015034 2.4e-07 59.7 66 53.0
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 4.2e-07 58.9 128 32.8
Nitab4.5_0000471g0100 Nicotiana tabacum HOM05D002954 ORTHO05D286785 4.2e-07 58.9 67 67.2
Nitab4.5_0006180g0060 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.4e-07 58.5 68 50.0
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 7.1e-07 58.2 116 35.3
arahy.Tifrunner.gnm1.ann1.27XFTQ Arachis hypogaea HOM05D009662 ORTHO05D003353 9.3e-07 57.8 141 32.6
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.6e-06 57.0 145 31.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-06 57.0 127 33.1
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 1.6e-06 57.0 62 41.9
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 3.5e-06 55.8 77 36.4
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 4.6e-06 55.5 50 54.0
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.6e-06 55.5 112 32.1
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 4.6e-06 55.5 38 63.2
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 6.0e-06 55.1 122 32.8
Solyc08g015830.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 6.0e-06 55.1 74 43.2


User provided reference genes

Program Settings