Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 0.0e+00 2008.8 1115 100.0
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 0.0e+00 1714.9 1031 93.1
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 0.0e+00 1338.2 1103 70.2
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 0.0e+00 1327.8 1103 70.5
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 0.0e+00 1281.9 1105 68.5
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 0.0e+00 1152.9 1104 65.8
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 4.5e-262 908.7 802 66.3
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-139 501.1 1343 37.2
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-139 501.1 1343 37.2
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-139 501.1 1343 37.2
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 2.4e-138 497.7 1406 38.3
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.3e-131 475.3 1210 40.1
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 3.6e-110 404.1 1250 35.4
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.2e-107 394.8 1324 36.0
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 5.4e-106 390.2 1260 37.0
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 1.3e-104 385.6 1184 37.3
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 1.8e-98 365.2 1334 34.6
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 1.7e-96 358.6 1176 34.3
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 8.6e-96 356.3 1195 38.0
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 9.5e-95 352.8 1194 33.5
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 9.5e-95 352.8 1301 34.9
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 5.7e-92 343.6 915 40.2
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 9.2e-90 336.3 1175 34.9
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 5.6e-87 327.0 1255 35.4
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.1e-86 325.1 1170 36.2
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 4.7e-86 323.9 1242 33.1
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 4.0e-85 320.9 1283 35.4
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.7e-83 314.3 1176 35.5
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.4e-82 312.4 1218 31.4
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.4e-82 312.4 1188 34.8
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.1e-79 302.8 1192 33.4
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 1.5e-79 302.4 899 39.0
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 4.3e-79 300.8 749 38.5
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 1.4e-77 295.8 1149 33.2
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.8e-77 295.4 1201 31.0
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 1.7e-75 288.9 1203 33.9
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 3.7e-75 287.7 1282 34.5
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 2.4e-74 285.0 1177 29.1
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 7.1e-74 283.5 1158 31.6
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 2.1e-73 282.0 1361 31.2
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 4.6e-73 280.8 1227 36.0
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 7.8e-73 280.0 1159 31.6
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 7.8e-73 280.0 228 62.7
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 1.3e-72 279.3 890 36.1
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 2.3e-72 278.5 1145 35.3
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 2.3e-72 278.5 1250 33.5
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 3.0e-72 278.1 1175 32.8
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 5.1e-72 277.3 1106 33.1
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.6e-70 272.3 1525 29.6
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 2.1e-70 271.9 276 53.6
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.2e-70 270.4 1147 30.4
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.4e-69 268.5 1157 31.8
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 3.1e-69 268.1 681 41.9
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 3.1e-69 268.1 1157 30.7
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 5.2e-69 267.3 724 39.4
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 6.8e-69 266.9 1175 32.2
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 2.0e-68 265.4 969 34.9
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 2.9e-67 261.5 1196 32.8
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 1.4e-66 259.2 251 54.2
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 1.4e-66 259.2 172 68.6
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 1.9e-66 258.8 184 66.3
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 9.2e-66 256.5 1162 31.0
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 2.1e-65 255.4 1116 33.5
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 2.1e-65 255.4 170 69.4
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.3e-64 252.7 1076 37.0
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.5e-63 249.2 1250 32.3
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 5.6e-63 247.3 1216 30.2
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 2.8e-62 245.0 779 35.0
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 6.2e-62 243.8 1050 37.7
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.1e-61 243.0 926 37.0
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.8e-61 242.3 1085 34.6
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 2.0e-60 238.8 738 38.2
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 3.4e-60 238.0 184 62.0
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 7.6e-60 236.9 170 63.5
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 1.3e-59 236.1 708 39.3
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 1.7e-59 235.7 1030 34.5
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 8.4e-59 233.4 140 71.4
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.3e-58 229.9 1163 32.8
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 1.6e-57 229.2 1056 31.1
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 7.8e-57 226.9 726 37.9
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 1.3e-56 226.1 985 34.4
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 2.3e-56 225.3 1192 31.3
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 3.9e-56 224.6 944 32.0
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 2.5e-55 221.9 1071 31.7
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 2.1e-54 218.8 1206 32.1
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 6.9e-53 213.8 1033 35.4
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 3.8e-51 208.0 1163 32.1
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 8.4e-51 206.8 1099 33.8
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 1.6e-46 192.6 843 31.4
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 8.1e-46 190.3 356 39.0
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 2.2e-43 182.2 364 36.5
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 6.4e-43 180.6 96 80.2
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 1.4e-42 179.5 102 69.6
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 7.9e-41 173.7 166 54.8
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.0e-40 173.3 737 32.3
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 2.8e-38 165.2 774 29.5
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 4.0e-37 161.4 144 51.4
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 1.7e-35 156.0 183 49.2
Nitab4.5_0006476g0020 Nicotiana tabacum HOM05D005457 ORTHO05D006350 3.5e-33 148.3 74 91.9
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 2.3e-32 145.6 329 35.3
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 7.4e-31 140.6 372 33.6
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 8.5e-27 127.1 765 28.9
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 7.9e-25 120.6 72 69.4
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 7.9e-25 120.6 72 69.4
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 1.0e-24 120.2 889 25.2
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 2.8e-22 112.1 666 29.4
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 7.7e-20 104.0 822 27.0
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 1.3e-19 103.2 160 41.9
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 6.1e-17 94.4 140 28.6
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 1.8e-16 92.8 136 30.1
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 5.1e-16 91.3 48 79.2
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 3.3e-15 88.6 131 32.1
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 9.7e-15 87.0 114 36.0
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 2.2e-14 85.9 97 38.1
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 6.3e-14 84.3 520 26.7
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 3.1e-13 82.0 796 25.3
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 5.3e-13 81.3 96 36.5
PGSC0003DMG400009632 Solanum tuberosum HOM05D005457 ORTHO05D006350 6.9e-13 80.9 44 88.6
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.1e-07 63.5 614 25.7
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 7.4e-07 60.8 629 26.1
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.8e-06 58.9 102 39.2


User provided reference genes

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