Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000750g0060 Nicotiana tabacum HOM05D006720 ORTHO05D008333 3.7e-48 194.5 95 100.0
Solyc03g117730.3 Solanum lycopersicum HOM05D006720 ORTHO05D008333 1.6e-35 152.5 74 100.0
Sopen03g036640 Solanum pennellii HOM05D006720 ORTHO05D008333 1.6e-35 152.5 74 100.0
PGSC0003DMG400014215 Solanum tuberosum HOM05D006720 ORTHO05D008333 1.6e-35 152.5 74 100.0
CAN.G1008.11 Capsicum annuum HOM05D006720 ORTHO05D008333 4.7e-35 151.0 74 98.6
Nitab4.5_0004738g0030 Nicotiana tabacum HOM05D006720 ORTHO05D008333 7.9e-35 150.2 74 98.6
Nitab4.5_0002700g0050 Nicotiana tabacum HOM05D006720 ORTHO05D008333 1.4e-34 149.4 74 97.3
Hma1.2p1_0329F.1_g127340 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 1.7e-32 142.5 74 90.5
Peaxi162Scf00314g01027 Petunia axillaris HOM05D006720 ORTHO05D008333 1.7e-32 142.5 74 93.2
MD09G1228600 Malus domestica HOM05D006720 ORTHO05D008333 1.8e-31 139.0 74 85.1
Dinv21432 Davidia involucrata HOM05D006720 ORTHO05D008333 2.4e-31 138.7 74 86.5
CSS0010698 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 4.1e-31 137.9 74 86.5
CSS0016662 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 4.1e-31 137.9 74 86.5
FvH4_6g28190 Fragaria vesca HOM05D006720 ORTHO05D008333 7.0e-31 137.1 74 83.8
FAN02G3506 Fragaria x ananassa HOM05D006720 ORTHO05D008333 7.0e-31 137.1 74 83.8
FAN05G2916 Fragaria x ananassa HOM05D006720 ORTHO05D008333 7.0e-31 137.1 74 83.8
FAN14G1194 Fragaria x ananassa HOM05D006720 ORTHO05D008333 7.0e-31 137.1 74 83.8
RcHm_v2.0_Chr2g0132241 Rosa chinensis HOM05D006720 ORTHO05D008333 9.1e-31 136.7 74 83.8
MD17G1227000 Malus domestica HOM05D006720 ORTHO05D008333 1.2e-30 136.3 74 83.8
HanXRQChr09g0274211 Helianthus annuus HOM05D006720 ORTHO05D008333 1.6e-30 136.0 74 83.8
GSVIVG01016095001 Vitis vinifera HOM05D006720 ORTHO05D008333 2.6e-30 135.2 73 84.9
CiPaw.02G163900 Carya illinoinensis HOM05D006720 ORTHO05D008333 3.5e-30 134.8 74 82.4
Actinidia08931 Actinidia chinensis HOM05D006720 ORTHO05D008333 5.9e-30 134.0 74 85.1
Haze_16697 Corylus avellana HOM05D006720 ORTHO05D008333 5.9e-30 134.0 74 79.7
Cc04_g05350 Coffea canephora HOM05D006720 ORTHO05D008333 7.7e-30 133.7 74 81.1
ECA232G3089 Erigeron canadensis HOM05D006720 ORTHO05D008333 7.7e-30 133.7 74 82.4
TAR383G0893 Trochodendron aralioides HOM05D006720 ORTHO05D008333 1.3e-29 132.9 74 82.4
Cfa001847 Carpinus fangiana HOM05D006720 ORTHO05D008333 1.7e-29 132.5 74 78.4
Migut.I00629 Erythranthe guttata HOM05D006720 ORTHO05D008333 1.7e-29 132.5 73 83.6
Eucgr.J03133 Eucalyptus grandis HOM05D006720 ORTHO05D008333 3.8e-29 131.3 73 80.8
SalBow7G4111 Salvia bowleyana HOM05D006720 ORTHO05D008333 3.8e-29 131.3 73 83.6
Actinidia38175 Actinidia chinensis HOM05D006720 ORTHO05D008333 5.0e-29 131.0 75 80.0
Lsat_1_v5_gn_4_84960 Lactuca sativa HOM05D006720 ORTHO05D008333 8.5e-29 130.2 74 78.4
Nn8g40120 Nelumbo nucifera HOM05D006720 ORTHO05D008333 8.5e-29 130.2 74 77.0
QL05p037203 Quercus lobata HOM05D006720 ORTHO05D008333 8.5e-29 130.2 74 78.4
Aqoxy7G02333 Aquilegia oxysepala HOM05D006720 ORTHO05D008333 1.5e-28 129.4 73 80.8
COL.COLO4_26788 Corchorus olitorius HOM05D006720 ORTHO05D008333 1.5e-28 129.4 74 79.7
MSTRG.11219 Avicennia marina HOM05D006720 ORTHO05D008333 1.9e-28 129.0 73 80.8
vmacro16839 Vaccinium macrocarpon HOM05D006720 ORTHO05D008333 1.9e-28 129.0 72 84.7
Sabra01G0028300 Salix brachista HOM05D006720 ORTHO05D008333 2.5e-28 128.6 74 81.1
SGA_v2.0_scaffold5G02836 Striga asiatica HOM05D006720 ORTHO05D008333 3.2e-28 128.3 73 79.5
CANSAT64G1752 Cannabis sativa HOM05D006720 ORTHO05D008333 4.2e-28 127.9 73 80.8
Rhsim12G0185100 Rhododendron simsii HOM05D006720 ORTHO05D008333 5.5e-28 127.5 73 80.8
Atru.chr1.2814 Acer truncatum HOM05D006720 ORTHO05D008333 9.4e-28 126.7 74 81.1
Phvul.005G183800 Phaseolus vulgaris HOM05D006720 ORTHO05D008333 2.1e-27 125.6 74 77.0
Thecc.06G048000 Theobroma cacao HOM05D006720 ORTHO05D008333 2.7e-27 125.2 74 78.4
VMungo1080G1475 Vigna mungo HOM05D006720 ORTHO05D008333 2.7e-27 125.2 74 77.0
arahy.Tifrunner.gnm1.ann1.597RPM Arachis hypogaea HOM05D006720 ORTHO05D008333 3.6e-27 124.8 73 78.1
arahy.Tifrunner.gnm1.ann1.HE2FXA Arachis hypogaea HOM05D006720 ORTHO05D008333 3.6e-27 124.8 73 78.1
Potri.001G041400 Populus trichocarpa HOM05D006720 ORTHO05D008333 3.6e-27 124.8 74 78.4
ClCG09G003460 Citrullus lanatus HOM05D006720 ORTHO05D008333 4.7e-27 124.4 74 79.7
MELO3C023483.2 Cucumis melo HOM05D006720 ORTHO05D008333 4.7e-27 124.4 74 79.7
PGR031G3965 Punica granatum HOM05D006720 ORTHO05D008333 4.7e-27 124.4 74 77.0
Oeu023309.1 Olea europaea HOM05D006720 ORTHO05D008333 6.1e-27 124.0 73 76.7
CsaV3_7G031740 Cucumis sativus L. HOM05D006720 ORTHO05D008333 8.0e-27 123.6 74 79.7
Gohir.A05G117100 Gossypium hirsutum HOM05D006720 ORTHO05D008333 1.0e-26 123.2 75 78.7
Gorai.009G121900 Gossypium raimondii HOM05D006720 ORTHO05D008333 1.0e-26 123.2 75 78.7
PSO017G2116 Papaver somniferum HOM05D006720 ORTHO05D008333 1.0e-26 123.2 74 77.0
Lalb_Chr14g0376131 Lupinus albus HOM05D006720 ORTHO05D008333 1.4e-26 122.9 74 75.7
Gohir.D05G118000 Gossypium hirsutum HOM05D006720 ORTHO05D008333 2.3e-26 122.1 75 77.3
TWI12G1459 Tripterygium wilfordii HOM05D006720 ORTHO05D008333 4.0e-26 121.3 74 74.3
DCAR_025536 Daucus carota HOM05D006720 ORTHO05D008333 5.2e-26 120.9 75 77.3
Lj3g0009177 Lotus japonicus HOM05D006720 ORTHO05D008333 6.7e-26 120.6 74 73.0
THA.LOC104812423 Tarenaya hassleriana HOM05D006720 ORTHO05D008333 6.7e-26 120.6 74 71.6
Ca_01005_v3 Cicer arietinum L. HOM05D006720 ORTHO05D008333 8.8e-26 120.2 74 73.0
Duzib235G0030 Durio zibethinus HOM05D006720 ORTHO05D008333 8.8e-26 120.2 74 74.3
Sed0009506 Sechium edule HOM05D006720 ORTHO05D008333 8.8e-26 120.2 74 77.0
Oeu036708.3 Olea europaea HOM05D001135 ORTHO05D008333 1.2e-25 119.8 102 60.8
MBI15_g26073_MAGBIO Magnolia biondii HOM05D006720 ORTHO05D008333 1.5e-25 119.4 74 74.3
Manes.04G100600 Manihot esculenta HOM05D006720 ORTHO05D008333 1.5e-25 119.4 74 74.3
Medtr2g105390 Medicago truncatula HOM05D006720 ORTHO05D008333 2.0e-25 119.0 74 74.3
PSO170G6385 Papaver somniferum HOM05D006720 ORTHO05D008333 2.0e-25 119.0 74 75.7
Psat5g308240 Pisum sativum HOM05D006720 ORTHO05D008333 4.4e-25 117.9 74 73.0
Sp1g14380 Schrenkiella parvula HOM05D006720 ORTHO05D008333 9.7e-25 116.7 73 71.2
Glyma.13G371500 Glycine max HOM05D006720 ORTHO05D008333 1.3e-24 116.3 76 76.3
Carub.0001s1587 Capsella rubella HOM05D006720 ORTHO05D008333 1.7e-24 115.9 73 71.2
Aa31LG7G640 Aethionema arabicum HOM05D006720 ORTHO05D008333 2.8e-24 115.2 73 69.9
AL1G28230 Arabidopsis lyrata HOM05D006720 ORTHO05D008333 3.7e-24 114.8 73 69.9
Thhalv10007810m.g Eutrema salsugineum HOM05D006720 ORTHO05D008333 3.7e-24 114.8 73 69.9
Psat3g139560 Pisum sativum HOM05D006720 ORTHO05D008333 3.7e-24 114.8 74 71.6
AT1G16070 Arabidopsis thaliana HOM05D006720 ORTHO05D008333 4.8e-24 114.4 73 69.9
EL10Ac8g19413 Beta vulgaris HOM05D006720 ORTHO05D008333 4.8e-24 114.4 73 72.6
A06p12090 Brassica napus HOM05D006720 ORTHO05D008333 4.8e-24 114.4 73 71.2
BcaC05g25606 Brassica carinata HOM05D006720 ORTHO05D008333 6.3e-24 114.0 73 69.9
C05p14260 Brassica napus HOM05D006720 ORTHO05D008333 6.3e-24 114.0 73 69.9
BraA06t24378Z Brassica rapa HOM05D006720 ORTHO05D008333 6.3e-24 114.0 73 69.9
BcaB02g06589 Brassica carinata HOM05D006720 ORTHO05D008333 8.2e-24 113.6 73 69.9
AUR62034065 Chenopodium quinoa HOM05D006720 ORTHO05D008333 8.2e-24 113.6 73 71.2
SEGI_19282 Sequoiadendron giganteum HOM05D006720 ORTHO05D008333 1.1e-23 113.2 74 67.6
BolC5t30158H Brassica oleracea HOM05D006720 ORTHO05D008333 1.4e-23 112.8 73 68.5
CARHR016580 Cardamine hirsuta HOM05D006720 ORTHO05D008333 2.4e-23 112.1 73 69.9
Hund06712 Selenicereus undatus HOM05D006720 ORTHO05D008333 9.1e-23 110.2 73 69.9
AUR62033006 Chenopodium quinoa HOM05D006720 ORTHO05D008333 5.9e-22 107.5 73 67.1
Ah.09g231790 Amaranthus hybridus HOM05D001135 ORTHO05D001005 7.7e-22 107.1 86 61.6
Manes.11G069900 Manihot esculenta HOM05D006720 ORTHO05D008333 1.0e-21 106.7 70 72.9
Sc10g0008450 Simmondsia chinensis HOM05D006720 ORTHO05D008333 2.2e-21 105.5 74 64.9
CDE05G1675 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 3.2e-20 101.7 59 78.0
HPP92_003070 Vanilla planifolia HOM05D006720 ORTHO05D008333 2.7e-19 98.6 92 52.2
SMO137G0108 Selaginella moellendorffii HOM05D006720 ORTHO05D008333 9.8e-17 90.1 74 52.7
Lj5C82T14 Lonicera japonica HOM05D006720 ORTHO05D008333 3.7e-16 88.2 74 59.5
ATR0767G122 Amborella trichopoda HOM05D006720 ORTHO05D008333 3.5e-14 81.6 80 50.0
Hma1.2p1_0338F.1_g129720 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 6.5e-13 77.4 40 90.0
FAN09G3415 Fragaria x ananassa HOM05D006720 ORTHO05D008333 2.6e-09 65.5 37 73.0
AagrBONN_evm.TU.Sc2ySwM_368.1228 Anthoceros agrestis HOM05D006720 ORTHO05D008333 3.4e-09 65.1 72 45.8
Prupe.3G104500 Prunus persica HOM05D006720 ORTHO05D008333 1.1e-07 60.1 74 44.6
CDE02G1676 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 1.8e-07 59.3 34 76.5
Zm00001eb233920 Zea mays HOM05D006720 ORTHO05D008333 7.0e-07 57.4 46 54.3


User provided reference genes

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