Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.7e-88 328.2 166 100.0
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-82 310.1 166 94.6
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.2e-65 253.4 166 75.9
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.4e-55 219.2 167 69.5
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 2.1e-54 216.1 163 65.6
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.1e-54 216.1 164 68.9
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.7e-53 213.0 167 67.7
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.3e-53 212.6 166 66.9
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.3e-53 212.6 167 67.7
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.3e-53 212.6 166 69.3
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.1e-53 211.5 158 68.4
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 4.3e-52 208.4 167 67.1
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 4.0e-50 201.8 168 63.7
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 9.0e-50 200.7 168 63.1
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 6.4e-48 194.5 167 63.5
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.9e-47 193.0 167 64.1
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 3.2e-47 192.2 167 62.9
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.6e-46 189.9 167 61.7
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.6e-45 184.5 166 59.0
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.6e-45 184.5 166 59.0
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 6.6e-45 184.5 167 58.7
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 4.3e-44 181.8 166 60.8
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.6e-43 179.9 163 59.5
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.1e-42 177.2 166 56.0
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.8e-42 176.4 166 59.6
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 5.8e-41 171.4 167 56.3
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 9.9e-41 170.6 165 55.2
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 2.9e-40 169.1 166 57.8
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.4e-39 166.8 166 58.4
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 7.1e-39 164.5 166 57.2
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 9.3e-39 164.1 167 53.9
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.2e-38 163.7 165 53.3
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.7e-38 162.5 166 52.4
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.6e-38 161.8 166 54.2
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.0e-37 160.6 164 53.7
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.8e-37 159.8 168 54.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.8e-37 159.8 168 54.2
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 2.3e-37 159.5 167 52.7
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.3e-37 159.5 166 53.6
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 3.9e-37 158.7 168 54.8
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.9e-37 158.7 168 54.8
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.9e-37 158.7 168 54.2
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.5e-36 156.8 166 51.2
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.5e-36 156.8 163 55.2
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 3.3e-36 155.6 167 53.3
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 5.6e-36 154.8 168 51.8
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 5.6e-36 154.8 169 50.9
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.3e-35 153.7 168 53.0
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.6e-35 153.3 170 51.8
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.7e-35 152.1 166 51.8
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 4.8e-35 151.8 170 51.2
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 4.8e-35 151.8 169 51.5
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 4.8e-35 151.8 169 50.9
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.1e-34 150.6 169 52.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 3.1e-34 149.1 166 53.0
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.1e-34 149.1 166 47.6
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 4.0e-34 148.7 163 50.9
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.0e-33 146.4 166 50.0
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.0e-32 144.1 166 47.6
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.4e-31 140.2 148 56.1
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.4e-31 140.2 167 46.7
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.9e-31 139.8 169 52.1
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.5e-31 139.4 171 46.8
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 4.2e-31 138.7 167 46.1
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.1e-31 137.9 170 48.2
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 9.3e-31 137.5 175 49.7
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 2.7e-30 136.0 170 49.4
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 2.7e-30 136.0 175 49.1
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 6.0e-30 134.8 176 48.9
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.0e-30 134.8 167 47.9
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 7.9e-30 134.4 175 47.4
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.8e-29 133.3 167 50.9
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 6.7e-29 131.3 168 47.6
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 1.9e-28 129.8 165 42.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.3e-28 129.0 168 48.2
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 7.4e-28 127.9 139 54.7
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.1e-27 126.3 168 46.4
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 8.2e-27 124.4 166 47.6
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.1e-26 124.0 172 47.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.8e-26 123.2 169 52.1
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.4e-26 122.9 177 45.2
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 5.3e-26 121.7 170 47.6
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 3.4e-25 119.0 166 45.2
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 5.8e-25 118.2 179 43.0
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 7.6e-25 117.9 167 46.1
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 7.6e-25 117.9 171 45.6
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.7e-24 116.7 166 38.6
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 3.8e-24 115.5 166 44.6
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 3.8e-24 115.5 206 38.3
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 8.4e-24 114.4 162 45.1
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 168 42.9
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 3.2e-23 112.5 163 44.8
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.2e-22 110.5 166 38.6
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 1.6e-22 110.2 168 41.1
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.6e-22 110.2 160 45.0
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 3.5e-22 109.0 166 42.8
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.5e-22 109.0 167 38.9
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 6.1e-22 108.2 167 42.5
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 7.9e-22 107.8 173 41.6
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.0e-21 107.5 211 38.4
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.0e-21 107.5 188 37.2
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.3e-21 107.1 188 41.0
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.3e-21 107.1 188 41.0
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.3e-21 107.1 188 41.0
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.3e-21 107.1 188 41.0
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.8e-21 106.7 211 37.9
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 5.1e-21 105.1 160 44.4
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.5e-20 103.6 180 41.1
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 3.3e-20 102.4 187 38.5
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 4.3e-20 102.1 189 37.6
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 5.7e-20 101.7 189 38.1
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 9.7e-20 100.9 138 46.4
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.6e-19 100.1 160 42.5
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 2.2e-19 99.8 218 36.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 2.4e-18 96.3 188 37.2
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.8e-16 89.0 146 39.7
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.8e-16 89.0 161 34.8
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 8.5e-16 87.8 160 34.4
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.1e-15 87.4 195 36.4
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.1e-15 87.4 167 40.1
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 2.5e-15 86.3 171 32.7
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 4.2e-15 85.5 162 40.7
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 7.2e-15 84.7 160 33.1
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 9.4e-15 84.3 162 32.1
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 3.6e-14 82.4 163 39.9
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 7.9e-14 81.3 163 34.4
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.8e-13 80.1 157 38.2
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 3.9e-13 79.0 124 46.8
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.1e-10 68.9 158 32.3
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.3e-10 68.6 167 32.3
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.5e-09 67.0 158 31.0
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 3.4e-09 65.9 170 30.0
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 4.2e-07 58.9 64 46.9
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 7.2e-07 58.2 76 39.5


User provided reference genes

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