Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000742g0210 Nicotiana tabacum HOM05D000651 ORTHO05D003435 1.3e-55 219.5 116 100.0
Sopen05g002380 Solanum pennellii HOM05D000651 ORTHO05D003435 5.7e-27 124.4 121 61.2
PGSC0003DMG400022611 Solanum tuberosum HOM05D000651 ORTHO05D003435 7.4e-27 124.0 121 61.2
CAN.G159.3 Capsicum annuum HOM05D000651 ORTHO05D003435 2.8e-26 122.1 121 58.7
Solyc05g006450.3 Solanum lycopersicum HOM05D000651 ORTHO05D003435 1.1e-25 120.2 121 59.5
Peaxi162Scf00159g00084 Petunia axillaris HOM05D000651 ORTHO05D003435 2.6e-24 115.5 129 55.8
Sabra05G0050800 Salix brachista HOM05D000651 ORTHO05D003435 4.0e-20 101.7 121 48.8
ECA246G3348 Erigeron canadensis HOM05D000651 ORTHO05D003435 6.8e-20 100.9 133 47.4
CSS0009730 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003435 8.8e-20 100.5 120 48.3
CSS0024016 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003435 8.8e-20 100.5 120 48.3
HanXRQChr02g0035871 Helianthus annuus HOM05D000651 ORTHO05D003435 8.8e-20 100.5 133 44.4
Gohir.A03G120900 Gossypium hirsutum HOM05D000651 ORTHO05D003435 1.5e-19 99.8 120 48.3
Gohir.D02G144200 Gossypium hirsutum HOM05D000651 ORTHO05D003435 1.5e-19 99.8 120 48.3
Gorai.005G161500 Gossypium raimondii HOM05D000651 ORTHO05D003435 1.5e-19 99.8 120 48.3
Lsat_1_v5_gn_3_55021 Lactuca sativa HOM05D000651 ORTHO05D003435 1.5e-19 99.8 133 45.1
Potri.005G060100 Populus trichocarpa HOM05D000651 ORTHO05D003435 1.5e-19 99.8 121 47.9
Peaxi162Scf00120g00210 Petunia axillaris HOM05D000651 ORTHO05D003435 2.0e-19 99.4 118 48.3
COL.COLO4_20490 Corchorus olitorius HOM05D000651 ORTHO05D003435 2.6e-19 99.0 120 50.0
Nitab4.5_0005150g0050 Nicotiana tabacum HOM05D005011 ORTHO05D006443 4.4e-19 98.2 120 49.2
Atru.chr11.927 Acer truncatum HOM05D000651 ORTHO05D003435 7.5e-19 97.4 120 47.5
CiPaw.06G050800 Carya illinoinensis HOM05D000651 ORTHO05D003435 1.3e-18 96.7 127 45.7
Cc11_g08610 Coffea canephora HOM05D000651 ORTHO05D003435 1.3e-18 96.7 117 47.9
Glyma.20G015400 Glycine max HOM05D000651 ORTHO05D003435 1.3e-18 96.7 128 46.9
Oeu037314.4 Olea europaea HOM05D002812 ORTHO05D003435 1.3e-18 96.7 128 46.9
Thecc.02G282200 Theobroma cacao HOM05D000651 ORTHO05D003435 1.3e-18 96.7 127 48.0
Solyc09g007640.4 Solanum lycopersicum HOM05D000651 ORTHO05D003435 1.7e-18 96.3 118 45.8
PGSC0003DMG400001753 Solanum tuberosum HOM05D000651 ORTHO05D003435 1.7e-18 96.3 120 44.2
Glyma.20G015100 Glycine max HOM05D000651 ORTHO05D003435 2.2e-18 95.9 128 46.1
Lsat_1_v5_gn_3_55001 Lactuca sativa HOM05D000651 ORTHO05D003435 2.2e-18 95.9 119 47.1
Sopen09g002510 Solanum pennellii HOM05D000651 ORTHO05D003435 3.7e-18 95.1 118 44.9
Ciclev10014786m.g Citrus clementina HOM05D000651 ORTHO05D003435 4.8e-18 94.7 127 48.0
Atru.chr2.99 Acer truncatum HOM05D000651 ORTHO05D003435 6.3e-18 94.4 120 45.8
Nn4g24169 Nelumbo nucifera HOM05D000651 ORTHO05D003435 8.3e-18 94.0 120 45.0
Phvul.002G094600 Phaseolus vulgaris HOM05D000651 ORTHO05D003435 1.1e-17 93.6 127 46.5
QL03p035375 Quercus lobata HOM05D000651 ORTHO05D003435 1.1e-17 93.6 127 44.9
vmacro00416 Vaccinium macrocarpon HOM05D000651 ORTHO05D003435 1.1e-17 93.6 120 45.8
DCAR_030221 Daucus carota HOM05D000651 ORTHO05D003435 1.4e-17 93.2 120 47.5
Cfa008200 Carpinus fangiana HOM05D000651 ORTHO05D003435 1.8e-17 92.8 127 45.7
CsaV3_5G013850 Cucumis sativus L. HOM05D000651 ORTHO05D003435 1.8e-17 92.8 120 45.8
Duzib251G0557 Durio zibethinus HOM05D000651 ORTHO05D003435 1.8e-17 92.8 127 46.5
ECA240G4370 Erigeron canadensis HOM05D000651 ORTHO05D003435 1.8e-17 92.8 120 48.3
Glyma.20G015600 Glycine max HOM05D000651 ORTHO05D003435 1.8e-17 92.8 128 45.3
Prupe.1G325200 Prunus persica HOM05D000651 ORTHO05D003435 2.4e-17 92.4 127 46.5
QL03p035397 Quercus lobata HOM05D000651 ORTHO05D003435 2.4e-17 92.4 128 44.5
Glyma.07G218400 Glycine max HOM05D000651 ORTHO05D003435 3.1e-17 92.0 128 44.5
PSO017G0211 Papaver somniferum HOM05D000651 ORTHO05D003435 4.1e-17 91.7 120 44.2
SGA_v2.0_scaffold119G32660 Striga asiatica HOM05D000651 ORTHO05D003435 4.1e-17 91.7 128 43.8
unitig_749.g13365 Utricularia gibba HOM05D000651 ORTHO05D003435 4.1e-17 91.7 120 44.2
DCAR_030222 Daucus carota HOM05D000651 ORTHO05D003435 5.3e-17 91.3 121 46.3
TAR622G0208 Trochodendron aralioides HOM05D000651 ORTHO05D003435 5.3e-17 91.3 120 45.0
CAN.G888.18 Capsicum annuum HOM05D000651 ORTHO05D003435 7.0e-17 90.9 120 45.8
CiPaw.06G050900 Carya illinoinensis HOM05D000651 ORTHO05D003435 7.0e-17 90.9 127 44.1
Phvul.002G094800 Phaseolus vulgaris HOM05D000651 ORTHO05D003435 9.1e-17 90.5 127 45.7
Actinidia08056 Actinidia chinensis HOM05D000651 ORTHO05D003435 1.2e-16 90.1 120 43.3
CANSAT64G1864 Cannabis sativa HOM05D000651 ORTHO05D003435 1.2e-16 90.1 120 41.7
Dinv07651 Davidia involucrata HOM05D000651 ORTHO05D003435 1.6e-16 89.7 121 45.5
Potri.008G129850 Populus trichocarpa HOM05D000651 ORTHO05D003435 1.6e-16 89.7 127 44.9
MELO3C018309.2 Cucumis melo HOM05D000651 ORTHO05D003435 2.0e-16 89.4 120 42.5
Nitab4.5_0000742g0200 Nicotiana tabacum HOM05D000651 ORTHO05D003435 2.0e-16 89.4 120 42.5
RcHm_v2.0_Chr4g0441341 Rosa chinensis HOM05D000651 ORTHO05D003435 2.0e-16 89.4 128 44.5
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 2.0e-16 89.4 129 44.2
Manes.15G128000 Manihot esculenta HOM05D000651 ORTHO05D003435 2.7e-16 89.0 120 43.3
Cfa015010 Carpinus fangiana HOM05D000651 ORTHO05D003435 3.5e-16 88.6 127 44.1
CiPaw.05G189700 Carya illinoinensis HOM05D000651 ORTHO05D003435 3.5e-16 88.6 120 42.5
Rhsim09G0066700 Rhododendron simsii HOM05D000651 ORTHO05D003435 3.5e-16 88.6 120 43.3
AUR62014178 Chenopodium quinoa HOM05D000651 ORTHO05D003435 4.5e-16 88.2 120 44.2
Oeu019966.1 Olea europaea HOM05D000651 ORTHO05D003435 4.5e-16 88.2 128 43.8
Potri.008G129800 Populus trichocarpa HOM05D000651 ORTHO05D003435 5.9e-16 87.8 127 43.3
TWI79G0957 Tripterygium wilfordii HOM05D000651 ORTHO05D003435 5.9e-16 87.8 120 42.5
EL10Ac6g14044 Beta vulgaris HOM05D000651 ORTHO05D003435 7.7e-16 87.4 120 44.2
Migut.G00087 Erythranthe guttata HOM05D000651 ORTHO05D003435 7.7e-16 87.4 118 39.8
TAR374G0094 Trochodendron aralioides HOM05D000651 ORTHO05D003435 7.7e-16 87.4 120 41.7
FAN15G1327 Fragaria x ananassa HOM05D000651 ORTHO05D003435 1.0e-15 87.0 121 46.3
RcHm_v2.0_Chr6g0287751 Rosa chinensis HOM05D000651 ORTHO05D003435 1.0e-15 87.0 128 45.3
Lalb_Chr05g0219521 Lupinus albus HOM05D000651 ORTHO05D003435 1.7e-15 86.3 128 43.8
Peaxi162Scf00159g00827 Petunia axillaris HOM05D000651 ORTHO05D003435 1.7e-15 86.3 115 42.6
AUR62002757 Chenopodium quinoa HOM05D000651 ORTHO05D003435 2.2e-15 85.9 120 43.3
Eucgr.G02184 Eucalyptus grandis HOM05D000651 ORTHO05D003435 2.2e-15 85.9 127 40.9
Gorai.012G181600 Gossypium raimondii HOM05D000651 ORTHO05D003435 2.2e-15 85.9 121 44.6
arahy.Tifrunner.gnm1.ann1.21IKS3 Arachis hypogaea HOM05D000651 ORTHO05D003435 2.9e-15 85.5 129 45.7
arahy.Tifrunner.gnm1.ann1.7T6UUP Arachis hypogaea HOM05D000651 ORTHO05D003435 2.9e-15 85.5 129 45.7
Oeu032024.1 Olea europaea HOM05D000651 ORTHO05D003435 2.9e-15 85.5 128 43.8
Sed0020091 Sechium edule HOM05D000651 ORTHO05D003435 2.9e-15 85.5 120 42.5
Aqoxy3G02802 Aquilegia oxysepala HOM05D000651 ORTHO05D003435 3.8e-15 85.1 128 43.8
Sabra08G0098400 Salix brachista HOM05D000651 ORTHO05D003435 5.0e-15 84.7 127 42.5
Thecc.02G287700 Theobroma cacao HOM05D000651 ORTHO05D003435 5.0e-15 84.7 121 43.8
FAN07G2206 Fragaria x ananassa HOM05D000651 ORTHO05D003435 6.5e-15 84.3 128 45.3
ClCG07G006600 Citrullus lanatus HOM05D000651 ORTHO05D003435 8.5e-15 84.0 128 43.8
FvH4_4g32480 Fragaria vesca HOM05D000651 ORTHO05D003435 1.1e-14 83.6 128 43.0
FAN12G3244 Fragaria x ananassa HOM05D000651 ORTHO05D003435 1.1e-14 83.6 128 43.0
FAN17G1132 Fragaria x ananassa HOM05D000651 ORTHO05D003435 1.1e-14 83.6 128 45.3
COL.COLO4_13097 Corchorus olitorius HOM05D000651 ORTHO05D003435 1.5e-14 83.2 130 41.5
Ah.02g127800 Amaranthus hybridus HOM05D000651 ORTHO05D003435 2.5e-14 82.4 120 41.7
FvH4_2g21240 Fragaria vesca HOM05D000651 ORTHO05D003435 2.5e-14 82.4 121 43.0
FAN24G0006 Fragaria x ananassa HOM05D000651 ORTHO05D003435 2.5e-14 82.4 121 43.0
Manes.03G131725 Manihot esculenta HOM05D000651 ORTHO05D003435 2.5e-14 82.4 121 42.1
Dinv14428 Davidia involucrata HOM05D000651 ORTHO05D003435 3.2e-14 82.0 71 63.4
FAN20G3070 Fragaria x ananassa HOM05D000651 ORTHO05D003435 3.2e-14 82.0 121 43.0
MD16G1027500 Malus domestica HOM05D000651 ORTHO05D003435 3.2e-14 82.0 120 42.5
VMungo1215G3036 Vigna mungo HOM05D000651 ORTHO05D003435 4.2e-14 81.6 119 43.7
Ca_18735_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003435 5.5e-14 81.3 130 40.0
Glyma.20G016750 Glycine max HOM05D000651 ORTHO05D003435 5.5e-14 81.3 103 46.6
Lj4g0025550 Lotus japonicus HOM05D000651 ORTHO05D003435 5.5e-14 81.3 130 41.5
Gohir.A04G142000 Gossypium hirsutum HOM05D000651 ORTHO05D003435 9.4e-14 80.5 121 42.1
RcHm_v2.0_Chr6g0287801 Rosa chinensis HOM05D000651 ORTHO05D003435 9.4e-14 80.5 127 43.3
Medtr5g097180 Medicago truncatula HOM05D000651 ORTHO05D003435 1.2e-13 80.1 131 43.5
Aa31LG1G110 Aethionema arabicum HOM05D000651 ORTHO05D003435 1.6e-13 79.7 120 39.2
CARHR015540 Cardamine hirsuta HOM05D000651 ORTHO05D003435 2.1e-13 79.3 120 40.8
Aqoxy3G02799 Aquilegia oxysepala HOM05D000651 ORTHO05D003435 3.6e-13 78.6 128 41.4
CDE02G3974 Ceratophyllum demersum HOM05D000651 ORTHO05D003435 3.6e-13 78.6 120 40.0
PGR119G2507 Punica granatum HOM05D000651 ORTHO05D003435 3.6e-13 78.6 121 40.5
THA.LOC104824145 Tarenaya hassleriana HOM05D000651 ORTHO05D003435 4.7e-13 78.2 120 38.3
Dinv07652 Davidia involucrata HOM05D000651 ORTHO05D003435 6.1e-13 77.8 54 70.4
Thhalv10007602m.g Eutrema salsugineum HOM05D000651 ORTHO05D003435 6.1e-13 77.8 120 40.0
TPR.G1323 Trifolium pratense HOM05D000651 ORTHO05D003435 6.1e-13 77.8 132 41.7
CiPaw.06G051000 Carya illinoinensis HOM05D000651 ORTHO05D003435 8.0e-13 77.4 121 40.5
Psat7g128480 Pisum sativum HOM05D000651 ORTHO05D003435 1.0e-12 77.0 124 37.9
CiPaw.05G250300 Carya illinoinensis HOM05D000651 ORTHO05D003435 1.4e-12 76.6 127 40.2
Medtr4g084710 Medicago truncatula HOM05D000651 ORTHO05D003435 1.4e-12 76.6 131 39.7
VMungo0251G0324 Vigna mungo HOM05D000651 ORTHO05D003435 1.4e-12 76.6 102 43.1
Lj3C872T1 Lonicera japonica HOM05D000651 ORTHO05D003435 1.8e-12 76.3 54 66.7
SGA_v2.0_scaffold67G22578 Striga asiatica HOM05D000651 ORTHO05D003435 2.3e-12 75.9 120 40.8
unitig_748.g8704 Utricularia gibba HOM05D000651 ORTHO05D003435 2.3e-12 75.9 129 42.6
A06p11020 Brassica napus HOM05D000651 ORTHO05D003435 3.0e-12 75.5 120 42.5
BraA06t24282Z Brassica rapa HOM05D000651 ORTHO05D003435 3.0e-12 75.5 120 42.5
MD13G1025000 Malus domestica HOM05D000651 ORTHO05D003435 3.0e-12 75.5 120 40.0
Psat2g004720 Pisum sativum HOM05D000651 ORTHO05D003435 5.2e-12 74.7 132 40.2
Haze_10678 Corylus avellana HOM05D000651 ORTHO05D003435 6.8e-12 74.3 112 42.0
BcaB02g06564 Brassica carinata HOM05D000651 ORTHO05D003435 8.8e-12 73.9 120 42.5
BcaC05g25432 Brassica carinata HOM05D000651 ORTHO05D003435 8.8e-12 73.9 121 40.5
MBI10_g02385_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 8.8e-12 73.9 120 39.2
MBI10_g02386_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 1.2e-11 73.6 120 38.3
AL1G27060 Arabidopsis lyrata HOM05D000651 ORTHO05D003435 1.5e-11 73.2 120 39.2
BcaC05g25437 Brassica carinata HOM05D000651 ORTHO05D003435 2.0e-11 72.8 120 43.3
C08p45230 Brassica napus HOM05D000651 ORTHO05D003435 2.0e-11 72.8 120 41.7
BolC5t30051H Brassica oleracea HOM05D000651 ORTHO05D003435 2.0e-11 72.8 120 43.3
BolC8t52071H Brassica oleracea HOM05D000651 ORTHO05D003435 2.0e-11 72.8 120 41.7
Haze_10996 Corylus avellana HOM05D000651 ORTHO05D003435 2.0e-11 72.8 54 66.7
QL01p001612 Quercus lobata HOM05D000651 ORTHO05D003435 2.0e-11 72.8 127 42.5
Sc04g0005380 Simmondsia chinensis HOM05D000651 ORTHO05D003435 2.0e-11 72.8 121 38.8
BraA09t41537Z Brassica rapa HOM05D000651 ORTHO05D003435 2.6e-11 72.4 120 40.0
Nn3g18232 Nelumbo nucifera HOM05D000651 ORTHO05D003435 2.6e-11 72.4 54 68.5
RcHm_v2.0_Chr6g0287771 Rosa chinensis HOM05D000651 ORTHO05D003435 2.6e-11 72.4 55 65.5
Cpa.g.sc65.145 Carica papaya HOM05D000651 ORTHO05D003435 3.4e-11 72.0 54 66.7
Ciclev10013479m.g Citrus clementina HOM05D000651 ORTHO05D003435 3.4e-11 72.0 99 46.5
FvH4_4g32490 Fragaria vesca HOM05D000651 ORTHO05D003435 3.4e-11 72.0 120 40.0
SalBow8G0771 Salvia bowleyana HOM05D000651 ORTHO05D003435 3.4e-11 72.0 117 37.6
Sp1g13390 Schrenkiella parvula HOM05D000651 ORTHO05D003435 3.4e-11 72.0 120 40.0
Cfa008616 Carpinus fangiana HOM05D000651 ORTHO05D003435 4.4e-11 71.6 54 64.8
AT1G15000 Arabidopsis thaliana HOM05D000651 ORTHO05D003435 5.7e-11 71.2 120 39.2
FAN17G0487 Fragaria x ananassa HOM05D000651 ORTHO05D003435 5.7e-11 71.2 120 40.0
vmacro00148 Vaccinium macrocarpon HOM05D000651 ORTHO05D000939 7.5e-11 70.9 113 39.8
Manes.17G077400 Manihot esculenta HOM05D000651 ORTHO05D003435 9.8e-11 70.5 116 41.4
A09p61650 Brassica napus HOM05D000651 ORTHO05D003435 1.3e-10 70.1 120 40.8
C05p13070 Brassica napus HOM05D000651 ORTHO05D003435 1.3e-10 70.1 121 42.1
ATR1153G035 Amborella trichopoda HOM05D000651 ORTHO05D003435 2.2e-10 69.3 120 35.0
SalBow8G2659 Salvia bowleyana HOM05D000651 ORTHO05D003435 2.8e-10 68.9 117 36.8
Carub.0001s1477 Capsella rubella HOM05D000651 ORTHO05D003435 4.8e-10 68.2 120 36.7
RcHm_v2.0_Chr4g0441351 Rosa chinensis HOM05D000651 ORTHO05D003435 1.4e-09 66.6 120 40.0
Haze_20473 Corylus avellana HOM05D000651 ORTHO05D003435 1.8e-09 66.2 101 41.6
arahy.Tifrunner.gnm1.ann1.QH9D47 Arachis hypogaea HOM05D000651 ORTHO05D003435 3.1e-09 65.5 130 41.5
Haze_24963 Corylus avellana HOM05D000651 ORTHO05D003435 4.1e-09 65.1 112 42.0
PGR119G0102 Punica granatum HOM05D000651 ORTHO05D003435 1.2e-08 63.5 120 34.2
Os05g0582800 Oryza sativa ssp. japonica HOM05D000651 ORTHO05D003435 4.5e-08 61.6 128 37.5
FvH4_2g21150 Fragaria vesca HOM05D000651 ORTHO05D003435 5.9e-08 61.2 44 63.6
FAN24G2760 Fragaria x ananassa HOM05D000651 ORTHO05D003435 5.9e-08 61.2 44 63.6
Haze_10895 Corylus avellana HOM05D000651 ORTHO05D003435 1.7e-07 59.7 105 35.2
MBI10_g02382_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 2.9e-07 58.9 53 62.3
Nn1g08502 Nelumbo nucifera HOM05D000651 ORTHO05D003435 3.8e-07 58.5 117 35.9
SalBow2G1618 Salvia bowleyana HOM05D000651 ORTHO05D003435 1.1e-06 57.0 54 55.6
arahy.Tifrunner.gnm1.ann1.DC62BH Arachis hypogaea HOM05D000651 ORTHO05D003435 4.2e-06 55.1 112 39.3


User provided reference genes

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