Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000741g0040 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.5e-175 619.4 310 100.0
Peaxi162Scf00267g00131 Petunia axillaris HOM05D008788 ORTHO05D012497 3.4e-87 325.9 270 64.4
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 1.6e-60 237.3 263 53.2
Nitab4.5_0000785g0060 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.0e-59 234.6 263 55.1
Nitab4.5_0000984g0100 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.2e-57 226.9 263 55.1
PGSC0003DMG400018146 Solanum tuberosum HOM05D008788 ORTHO05D012497 1.1e-56 224.6 250 54.8
Sopen03g032040 Solanum pennellii HOM05D008788 ORTHO05D012497 7.5e-50 201.8 247 51.0
Solyc03g112970.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 7.8e-47 191.8 247 48.2
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 2.5e-45 186.8 230 45.7
Sopen03g032030 Solanum pennellii HOM05D008788 ORTHO05D012497 5.6e-45 185.7 249 46.6
Solyc03g112960.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 1.2e-44 184.5 249 46.2
CAN.G1673.12 Capsicum annuum HOM05D008788 ORTHO05D012497 6.2e-44 182.2 226 45.6
Nitab4.5_0000026g0140 Nicotiana tabacum HOM05D008788 ORTHO05D012497 3.2e-40 169.9 210 45.2
Nitab4.5_0000741g0020 Nicotiana tabacum HOM05D008788 ORTHO05D012497 5.6e-37 159.1 229 43.2
CAN.G1305.15 Capsicum annuum HOM05D008788 ORTHO05D012497 3.4e-26 123.2 114 50.0
Peaxi162Scf00712g00610 Petunia axillaris HOM05D008788 ORTHO05D012497 1.7e-22 110.9 237 35.9
Cc04_g17010 Coffea canephora HOM05D008788 ORTHO05D012497 1.5e-21 107.8 252 33.3
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 2.5e-21 107.1 207 31.9
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 2.5e-21 107.1 207 31.9
Oeu006493.1 Olea europaea HOM05D000281 ORTHO05D009440 1.1e-19 101.7 190 34.2
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 3.1e-19 100.1 212 32.5
Cc04_g17050 Coffea canephora HOM05D000281 ORTHO05D009440 6.9e-19 99.0 237 32.5
Peaxi162Scf00267g00137 Petunia axillaris HOM05D008788 ORTHO05D012497 3.4e-18 96.7 118 44.9
Dinv19941 Davidia involucrata HOM05D000036 ORTHO05D009440 2.2e-17 94.0 167 35.3
TAR624G0531 Trochodendron aralioides HOM05D000036 ORTHO05D002265 3.8e-17 93.2 230 30.4
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 6.4e-17 92.4 230 26.5
Sopen03g032050 Solanum pennellii HOM05D000281 ORTHO05D009440 6.4e-17 92.4 187 32.6
TAR626G1978 Trochodendron aralioides HOM05D000036 ORTHO05D002265 6.4e-17 92.4 232 28.4
Nitab4.5_0000026g0150 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.9e-16 90.9 210 34.3
Haze_07345 Corylus avellana HOM05D000281 ORTHO05D009440 1.2e-15 88.2 241 29.0
Duzib168G1886 Durio zibethinus HOM05D000036 ORTHO05D002265 1.6e-15 87.8 230 26.5
PGSC0003DMG400018145 Solanum tuberosum HOM05D000281 ORTHO05D009440 2.1e-15 87.4 242 29.8
Solyc03g112990.1 Solanum lycopersicum HOM05D000281 ORTHO05D009440 2.7e-15 87.0 230 30.0
vmacro18768 Vaccinium macrocarpon HOM05D000036 ORTHO05D002265 3.5e-15 86.7 179 32.4
HanXRQChr05g0158071 Helianthus annuus HOM05D000036 ORTHO05D009440 7.8e-15 85.5 194 32.0
QL05p001219 Quercus lobata HOM05D000036 ORTHO05D002265 1.0e-14 85.1 175 29.1
Cc04_g16990 Coffea canephora HOM05D008788 ORTHO05D012497 1.7e-14 84.3 242 29.3
Oeu060796.1 Olea europaea HOM05D008788 ORTHO05D012497 1.7e-14 84.3 242 30.6
Actinidia19045 Actinidia chinensis HOM05D008788 ORTHO05D009440 2.3e-14 84.0 152 34.9
CSS0039171 Camellia sinensis var. sinensis HOM05D008788 ORTHO05D009440 2.3e-14 84.0 222 27.0
Rhsim08G0244700 Rhododendron simsii HOM05D000036 ORTHO05D002265 3.9e-14 83.2 188 32.4
CSS0005969 Camellia sinensis var. sinensis HOM05D008788 ORTHO05D009440 5.1e-14 82.8 222 27.5
Cfa018963 Carpinus fangiana HOM05D000281 ORTHO05D009440 5.1e-14 82.8 214 30.4
CiPaw.11G042300 Carya illinoinensis HOM05D000036 ORTHO05D009440 6.6e-14 82.4 209 30.6
Peaxi162Scf00009g00113 Petunia axillaris HOM05D000281 ORTHO05D009440 6.6e-14 82.4 181 31.5
Migut.D01837 Erythranthe guttata HOM05D008788 ORTHO05D012497 1.5e-13 81.3 265 30.6
Sabra03G0087100 Salix brachista HOM05D000281 ORTHO05D009440 2.5e-13 80.5 244 29.1
Sabra01G0081700 Salix brachista HOM05D000281 ORTHO05D009440 5.6e-13 79.3 232 28.4
Thecc.09G068800 Theobroma cacao HOM05D000036 ORTHO05D002265 5.6e-13 79.3 231 26.4
Atru.chr9.2281 Acer truncatum HOM05D000281 ORTHO05D009440 9.6e-13 78.6 187 28.9
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 1.3e-12 78.2 226 27.9
HanXRQChr08g0235671 Helianthus annuus HOM05D000036 ORTHO05D009440 2.8e-12 77.0 240 23.3
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 3.6e-12 76.6 233 28.8
Aqoxy7G00930 Aquilegia oxysepala HOM05D000036 ORTHO05D009440 4.8e-12 76.3 221 28.1
CSS0007314 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 4.8e-12 76.3 183 27.3
Dinv25498 Davidia involucrata HOM05D000036 ORTHO05D002265 6.2e-12 75.9 235 27.7
Lj5C112G10 Lonicera japonica HOM05D000036 ORTHO05D009440 6.2e-12 75.9 164 32.3
SalBow5G2058 Salvia bowleyana HOM05D008788 ORTHO05D009440 8.1e-12 75.5 165 30.3
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 8.1e-12 75.5 250 28.0
Lj5C29T4 Lonicera japonica HOM05D000036 ORTHO05D002265 1.1e-11 75.1 224 26.8
SalBow5G1583 Salvia bowleyana HOM05D008788 ORTHO05D009440 1.4e-11 74.7 137 32.8
Migut.I00162 Erythranthe guttata HOM05D000281 ORTHO05D009440 1.8e-11 74.3 243 27.6
COL.COLO4_21192 Corchorus olitorius HOM05D000036 ORTHO05D002265 3.1e-11 73.6 227 26.0
COL.COLO4_30864 Corchorus olitorius HOM05D000036 ORTHO05D002265 3.1e-11 73.6 248 27.4
RcHm_v2.0_Chr2g0147861 Rosa chinensis HOM05D000036 ORTHO05D002265 3.1e-11 73.6 227 25.1
Lalb_Chr04g0253941 Lupinus albus HOM05D000036 ORTHO05D002265 9.0e-11 72.0 179 26.8
Sed0006981 Sechium edule HOM05D000281 ORTHO05D009440 9.0e-11 72.0 229 29.7
PSO724G0370 Papaver somniferum HOM05D000036 ORTHO05D002265 1.5e-10 71.2 179 26.3
Potri.003G123500 Populus trichocarpa HOM05D000281 ORTHO05D009440 3.4e-10 70.1 234 26.9
Nn6g35732 Nelumbo nucifera HOM05D000036 ORTHO05D002265 4.5e-10 69.7 224 26.3
CSS0042964 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 5.8e-10 69.3 180 26.7
Lsat_1_v5_gn_4_92341 Lactuca sativa HOM05D000036 ORTHO05D002265 2.9e-09 67.0 133 27.8
Prupe.3G031000 Prunus persica HOM05D000036 ORTHO05D000095 2.9e-09 67.0 227 25.1
FvH4_5g15211 Fragaria vesca HOM05D000281 ORTHO05D009440 3.8e-09 66.6 240 27.5
Actinidia21837 Actinidia chinensis HOM05D000036 ORTHO05D002265 4.9e-09 66.2 225 25.8
RcHm_v2.0_Chr7g0180951 Rosa chinensis HOM05D000281 ORTHO05D009440 6.4e-09 65.9 239 28.9
PGSC0003DMG400009177 Solanum tuberosum HOM05D000036 ORTHO05D002265 6.4e-09 65.9 193 24.4
Manes.11G012600 Manihot esculenta HOM05D000036 ORTHO05D002265 2.4e-08 63.9 247 25.5
Lalb_Chr17g0343221 Lupinus albus HOM05D000036 ORTHO05D002265 3.2e-08 63.5 183 27.3
CAN.G790.58 Capsicum annuum HOM05D000036 ORTHO05D002265 4.2e-08 63.2 165 26.7
Cpa.g.sc25.193 Carica papaya HOM05D000036 ORTHO05D002265 4.2e-08 63.2 239 25.5
Manes.03G057000 Manihot esculenta HOM05D000036 ORTHO05D002265 4.2e-08 63.2 241 27.0
Ciclev10025232m.g Citrus clementina HOM05D000036 ORTHO05D002265 5.4e-08 62.8 193 26.9
MD17G1154400 Malus domestica HOM05D000036 ORTHO05D002265 7.1e-08 62.4 237 23.6
ATR0099G099 Amborella trichopoda HOM05D000036 ORTHO05D002265 9.3e-08 62.0 175 26.9
PGSC0003DMG400018147 Solanum tuberosum HOM05D008788 ORTHO05D012497 9.3e-08 62.0 123 39.0
vmacro15088 Vaccinium macrocarpon HOM05D000036 ORTHO05D002265 9.3e-08 62.0 84 40.5
Potri.001G162700 Populus trichocarpa HOM05D000036 ORTHO05D002265 1.2e-07 61.6 181 25.4
MD09G1172900 Malus domestica HOM05D000036 ORTHO05D002265 2.7e-07 60.5 175 22.9
QL05p001195 Quercus lobata HOM05D000036 ORTHO05D050620 6.0e-07 59.3 111 29.7
DCAR_028535 Daucus carota HOM05D000036 ORTHO05D002265 7.9e-07 58.9 177 25.4
unitig_62.g23557 Utricularia gibba HOM05D000036 ORTHO05D009440 1.8e-06 57.8 230 24.8
QL05p000801 Quercus lobata HOM05D000036 ORTHO05D050620 2.3e-06 57.4 111 29.7
MELO3C022701.2 Cucumis melo HOM05D000036 ORTHO05D002265 3.9e-06 56.6 177 23.7
Glyma.06G192400 Glycine max HOM05D000281 ORTHO05D009440 3.9e-06 56.6 218 24.8
Potri.003G072700 Populus trichocarpa HOM05D000036 ORTHO05D002265 6.7e-06 55.8 181 24.3


User provided reference genes

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