Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000741g0020 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.6e-144 515.4 265 100.0
Nitab4.5_0000026g0140 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.2e-107 393.7 224 90.2
Nitab4.5_0000741g0040 Nicotiana tabacum HOM05D008788 ORTHO05D012497 4.0e-36 156.0 229 43.2
Peaxi162Scf00267g00137 Petunia axillaris HOM05D008788 ORTHO05D012497 1.0e-34 151.4 119 65.5
Peaxi162Scf00267g00131 Petunia axillaris HOM05D008788 ORTHO05D012497 6.7e-31 138.7 192 42.2
Sopen03g032030 Solanum pennellii HOM05D008788 ORTHO05D012497 7.4e-30 135.2 226 40.3
PGSC0003DMG400018146 Solanum tuberosum HOM05D008788 ORTHO05D012497 9.6e-30 134.8 231 40.3
Solyc03g112960.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 8.2e-29 131.7 226 39.4
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 4.0e-28 129.4 201 42.8
Sopen03g032040 Solanum pennellii HOM05D008788 ORTHO05D012497 2.2e-26 123.6 229 39.3
Nitab4.5_0000785g0060 Nicotiana tabacum HOM05D008788 ORTHO05D012497 3.2e-25 119.8 193 43.0
Nitab4.5_0000984g0100 Nicotiana tabacum HOM05D008788 ORTHO05D012497 3.2e-25 119.8 202 42.6
Solyc03g112970.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 4.2e-25 119.4 229 38.4
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 1.0e-23 114.8 201 38.3
CAN.G1673.12 Capsicum annuum HOM05D008788 ORTHO05D012497 1.9e-22 110.5 198 38.4
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 4.2e-17 92.8 187 33.2
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 4.2e-17 92.8 187 33.2
Sopen03g032050 Solanum pennellii HOM05D000281 ORTHO05D009440 1.7e-13 80.9 184 31.0
PGSC0003DMG400018145 Solanum tuberosum HOM05D000281 ORTHO05D009440 1.7e-13 80.9 199 31.2
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 2.2e-13 80.5 179 31.8
Solyc03g112990.1 Solanum lycopersicum HOM05D000281 ORTHO05D009440 3.7e-13 79.7 184 31.0
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 1.4e-12 77.8 180 30.0
Peaxi162Scf00009g00113 Petunia axillaris HOM05D000281 ORTHO05D009440 3.1e-12 76.6 186 31.2
Cc04_g17050 Coffea canephora HOM05D000281 ORTHO05D009440 2.6e-11 73.6 184 31.0
Oeu006493.1 Olea europaea HOM05D000281 ORTHO05D009440 2.6e-11 73.6 181 28.2
CAN.G1305.15 Capsicum annuum HOM05D008788 ORTHO05D012497 5.9e-11 72.4 115 38.3
ECA234G1515 Erigeron canadensis HOM05D000036 ORTHO05D009440 5.9e-11 72.4 186 28.5
TAR624G0531 Trochodendron aralioides HOM05D000036 ORTHO05D002265 5.9e-11 72.4 177 28.2
HanXRQChr05g0158071 Helianthus annuus HOM05D000036 ORTHO05D009440 6.5e-10 68.9 181 27.6
TAR626G1978 Trochodendron aralioides HOM05D000036 ORTHO05D002265 1.1e-09 68.2 181 26.5
Cc04_g16990 Coffea canephora HOM05D008788 ORTHO05D012497 9.4e-09 65.1 189 30.2
Dinv19941 Davidia involucrata HOM05D000036 ORTHO05D009440 9.4e-09 65.1 151 31.1
Gorai.009G038900 Gossypium raimondii HOM05D000036 ORTHO05D002265 1.2e-08 64.7 185 26.5
ECA246G4295 Erigeron canadensis HOM05D000036 ORTHO05D009440 1.6e-08 64.3 186 25.3
Sed0006981 Sechium edule HOM05D000281 ORTHO05D009440 1.6e-08 64.3 184 29.3
Nn8g38513 Nelumbo nucifera HOM05D000036 ORTHO05D009440 2.1e-08 63.9 183 25.7
CSS0039171 Camellia sinensis var. sinensis HOM05D008788 ORTHO05D009440 2.7e-08 63.5 201 28.9
Sabra03G0087100 Salix brachista HOM05D000281 ORTHO05D009440 3.6e-08 63.2 181 29.8
CSS0005969 Camellia sinensis var. sinensis HOM05D008788 ORTHO05D009440 4.7e-08 62.8 201 29.9
Gohir.D05G038401 Gossypium hirsutum HOM05D000036 ORTHO05D000095 4.7e-08 62.8 185 26.5
Gohir.A05G036900 Gossypium hirsutum HOM05D000036 ORTHO05D002265 7.9e-08 62.0 185 26.5
ATR0099G099 Amborella trichopoda HOM05D000036 ORTHO05D002265 1.4e-07 61.2 179 30.2
Lsat_1_v5_gn_5_137800 Lactuca sativa HOM05D000036 ORTHO05D002265 1.4e-07 61.2 181 26.0
Oeu053422.1 Olea europaea HOM05D000036 ORTHO05D002265 1.4e-07 61.2 182 25.3
Cc04_g17010 Coffea canephora HOM05D008788 ORTHO05D012497 1.8e-07 60.8 194 28.4
vmacro18768 Vaccinium macrocarpon HOM05D000036 ORTHO05D002265 1.8e-07 60.8 179 26.8
SalBow5G2058 Salvia bowleyana HOM05D008788 ORTHO05D009440 2.3e-07 60.5 137 30.7
Aqoxy2G00650 Aquilegia oxysepala HOM05D000036 ORTHO05D009440 3.0e-07 60.1 182 29.7
PSO724G0370 Papaver somniferum HOM05D000036 ORTHO05D002265 3.0e-07 60.1 183 23.5
Aqoxy7G04183 Aquilegia oxysepala HOM05D000036 ORTHO05D002265 6.7e-07 58.9 188 28.2
SalBow5G1583 Salvia bowleyana HOM05D008788 ORTHO05D009440 6.7e-07 58.9 137 30.7
Rhsim08G0244700 Rhododendron simsii HOM05D000036 ORTHO05D002265 1.1e-06 58.2 179 28.5
Dinv25498 Davidia involucrata HOM05D000036 ORTHO05D002265 1.5e-06 57.8 187 25.7
Duzib168G1886 Durio zibethinus HOM05D000036 ORTHO05D002265 1.5e-06 57.8 185 27.0
Peaxi162Scf00712g00610 Petunia axillaris HOM05D008788 ORTHO05D012497 2.6e-06 57.0 86 34.9
Hma1.2p1_0229F.1_g097090 Hydrangea macrophylla HOM05D000036 ORTHO05D002265 3.3e-06 56.6 199 27.1
Actinidia19045 Actinidia chinensis HOM05D008788 ORTHO05D009440 5.7e-06 55.8 123 27.6
CANSAT56G2197 Cannabis sativa HOM05D000036 ORTHO05D002265 5.7e-06 55.8 173 22.5
TWI23G0515 Tripterygium wilfordii HOM05D000036 ORTHO05D002265 5.7e-06 55.8 177 26.0


User provided reference genes

Program Settings