Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000740g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-31 137.5 67 100.0
Nitab4.5_0000931g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-25 119.0 65 87.7
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-25 118.2 66 86.4
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-25 117.9 66 84.8
Nitab4.5_0007229g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-25 117.5 65 86.2
Nitab4.5_0000007g0330 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-24 115.5 66 81.8
Nitab4.5_0000049g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-24 115.5 66 80.3
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-24 114.8 65 87.7
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-24 114.4 64 84.4
Nitab4.5_0000415g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-24 114.0 66 81.8
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.9e-24 112.8 66 78.8
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-23 112.5 66 80.3
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-23 110.5 66 81.8
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-23 110.2 65 83.1
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-22 107.8 66 77.3
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-22 107.5 66 75.8
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-22 107.5 65 78.5
Nitab4.5_0000644g0170 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-22 107.1 66 74.2
Nitab4.5_0001523g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.1e-22 106.7 66 72.7
Nitab4.5_0003622g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-22 106.3 64 76.6
Nitab4.5_0000774g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-21 105.1 65 80.0
Nitab4.5_0001490g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-21 104.8 66 75.8
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-21 104.4 62 82.3
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-21 104.4 65 80.0
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-21 103.2 66 72.7
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-20 102.1 63 76.2
Nitab4.5_0002263g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-20 101.7 65 80.0
Nitab4.5_0001369g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-20 100.9 66 69.7
Nitab4.5_0002232g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-20 100.9 64 75.0
PGSC0003DMG400039811 Solanum tuberosum HOM05D001309 ORTHO05D000385 3.9e-20 100.9 66 69.7
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-20 100.5 66 72.7
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.7e-20 100.1 66 72.7
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.7e-20 99.8 65 76.9
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-19 98.2 62 75.8
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-19 98.2 66 75.8
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-19 97.4 66 71.2
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-19 97.1 64 70.3
Nitab4.5_0003082g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-19 97.1 57 75.4
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-19 96.7 66 68.2
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.6e-19 96.3 65 75.4
Nitab4.5_0002925g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-18 94.7 60 75.0
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-18 94.4 66 71.2
Nitab4.5_0007969g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-18 94.4 64 70.3
Nitab4.5_0000151g0380 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.2e-18 93.6 63 71.4
Solyc04g150151.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 6.2e-18 93.6 65 67.7
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.1e-18 93.2 66 71.2
Nitab4.5_0006065g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-17 92.4 65 66.2
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-17 91.3 65 67.7
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-17 90.1 66 65.2
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 6.9e-17 90.1 63 68.3
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.0e-17 89.7 66 62.1
Nitab4.5_0000220g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.0e-17 89.7 66 63.6
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-16 88.6 66 66.7
Nitab4.5_0000522g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-16 87.0 65 63.1
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-16 86.7 66 65.2
PGSC0003DMG400042577 Solanum tuberosum HOM05D001309 ORTHO05D000385 9.9e-16 86.3 66 65.2
Nitab4.5_0002530g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-15 85.5 63 66.7
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.4e-15 83.2 66 63.6
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.2e-14 80.9 64 56.2
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-14 80.9 65 64.6
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.6e-13 79.0 68 57.4
Solyc04g150152.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 2.3e-12 75.1 52 67.3
Nitab4.5_0003611g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.5e-11 72.4 39 82.1
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.9e-11 72.0 64 53.1
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-11 71.6 48 70.8
Sopen04g022360 Solanum pennellii HOM05D001309 ORTHO05D000385 2.5e-11 71.6 54 64.8
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 3.3e-11 71.2 46 67.4
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-11 70.5 66 56.1
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-11 70.1 45 68.9
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-11 70.1 61 57.4
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-10 69.3 50 66.0
Nitab4.5_0000524g0120 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-10 67.8 48 70.8
Nitab4.5_0001132g0060 Nicotiana tabacum HOM05D001309 ORTHO05D009935 4.8e-10 67.4 66 59.1
Nitab4.5_0003836g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-10 67.4 46 69.6
Nitab4.5_0003283g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 2.4e-09 65.1 66 54.5
Nitab4.5_0003433g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-09 65.1 66 53.0
Nitab4.5_0000866g0110 Nicotiana tabacum HOM05D001309 ORTHO05D009935 9.0e-09 63.2 42 66.7
Sopen04g022380 Solanum pennellii HOM05D007487 ORTHO05D008561 1.5e-08 62.4 42 69.0
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 2.2e-07 58.5 49 51.0
Nitab4.5_0002419g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-07 58.2 46 69.6
Nitab4.5_0001903g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-07 57.8 34 73.5
Nitab4.5_0005502g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-06 55.1 63 50.8


User provided reference genes

Program Settings