Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.7e-241 839.0 439 100.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 3.6e-207 724.9 465 83.2
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.9e-203 712.6 465 82.6
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 7.8e-202 707.2 465 81.7
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 8.1e-183 644.0 414 83.3
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 5.1e-161 571.6 496 63.5
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 6.7e-161 571.2 495 63.6
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 1.5e-157 560.1 472 65.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 2.6e-157 559.3 465 65.4
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 2.6e-157 559.3 475 65.1
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 2.6e-157 559.3 474 63.9
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 3.2e-155 552.4 487 61.6
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 4.2e-155 552.0 460 65.2
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 6.1e-154 548.1 468 62.2
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 7.9e-154 547.7 472 61.0
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.1e-153 545.0 463 64.4
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.1e-153 545.0 463 64.4
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 8.7e-153 544.3 463 64.4
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.1e-152 543.9 467 64.0
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.1e-152 543.9 467 64.0
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 2.5e-152 542.7 469 64.4
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 2.5e-152 542.7 482 61.2
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 4.3e-152 542.0 466 62.9
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 7.4e-152 541.2 467 64.5
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 9.7e-152 540.8 469 63.3
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.3e-151 540.4 467 64.0
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.6e-151 540.0 466 63.1
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.2e-151 539.7 475 62.3
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 4.8e-151 538.5 328 85.1
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 6.3e-151 538.1 324 89.5
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 8.2e-151 537.7 497 59.8
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.1e-150 537.3 466 64.2
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.1e-150 535.4 467 63.8
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 6.9e-150 534.6 465 61.5
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 9.0e-150 534.3 465 63.4
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 1.2e-149 533.9 466 62.4
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.5e-149 533.5 470 62.1
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 2.0e-149 533.1 469 61.4
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.6e-149 532.7 466 63.7
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.4e-147 526.9 468 62.6
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 5.5e-147 525.0 467 60.8
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.6e-146 523.5 465 60.4
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.6e-146 523.5 485 60.0
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.6e-146 522.3 468 60.9
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 4.6e-146 521.9 466 62.4
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 4.6e-146 521.9 476 61.3
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 4.6e-146 521.9 467 62.5
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 5.1e-145 518.5 464 61.0
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 2.0e-144 516.5 459 61.7
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 4.3e-144 515.4 400 67.8
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 7.4e-144 514.6 470 59.8
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 4.8e-143 511.9 465 60.0
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 4.8e-143 511.9 469 60.6
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 8.2e-143 511.1 467 59.7
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.4e-142 510.4 464 60.1
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.2e-141 507.3 464 60.3
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.5e-141 506.9 468 59.4
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 2.6e-141 506.1 466 59.9
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 7.7e-141 504.6 467 60.6
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.0e-140 504.2 465 59.6
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 2.2e-140 503.1 442 62.4
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 9.4e-139 497.7 466 58.8
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.6e-138 496.9 461 60.1
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 2.1e-138 496.5 463 58.7
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 2.7e-138 496.1 465 58.9
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 6.1e-138 495.0 465 58.9
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 2.3e-137 493.0 460 58.9
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 5.1e-137 491.9 466 58.8
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.5e-136 490.3 458 58.5
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.0e-136 490.0 460 58.0
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.3e-135 487.3 460 58.7
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 2.2e-135 486.5 401 64.8
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.7e-135 485.7 460 58.7
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 4.8e-135 485.3 460 58.3
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 4.1e-134 482.3 460 58.3
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 7.0e-134 481.5 460 58.3
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 4.5e-133 478.8 460 57.4
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 5.9e-133 478.4 460 57.8
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 7.7e-133 478.0 460 58.0
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.1e-131 474.2 460 55.7
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 9.4e-131 471.1 466 57.1
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.6e-130 470.3 474 55.7
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 6.1e-130 468.4 402 64.4
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.0e-129 467.6 460 56.5
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 1.1e-128 464.2 482 52.5
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 2.2e-127 459.9 478 52.7
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 5.3e-126 455.3 482 54.6
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 6.5e-124 448.4 362 66.3
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.9e-123 446.8 464 54.3
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 4.0e-121 439.1 331 69.2
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 4.1e-118 429.1 368 61.4
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 1.2e-117 427.6 483 49.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.2e-114 417.5 370 60.8
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.6e-114 417.2 476 50.8
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.7e-111 406.0 467 48.2
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 2.4e-110 403.3 467 48.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 2.7e-109 399.8 458 49.1
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 1.3e-108 397.5 320 66.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 7.5e-104 381.7 477 46.5
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.7e-103 380.6 323 64.4
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 1.3e-100 370.9 319 62.1
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.9e-94 350.5 518 44.4
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 6.0e-93 345.5 359 52.9
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 8.9e-89 331.6 305 61.6
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 3.5e-85 319.7 348 51.1
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.5e-75 287.7 265 60.8
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 2.8e-74 283.5 487 37.0
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.7e-68 264.2 402 40.5
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 8.1e-66 255.4 219 63.0
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.3e-60 237.3 492 33.7
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 2.5e-51 207.2 342 42.4
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 3.5e-45 186.8 171 60.2
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 6.1e-37 159.5 493 29.4
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.9e-31 140.6 160 50.0
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 3.1e-25 120.6 386 33.2
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.3e-25 119.8 111 60.4
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-23 115.2 428 27.1
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 8.5e-23 112.5 402 25.1
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 3.6e-21 107.1 505 24.8
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 3.0e-20 104.0 81 61.7
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 3.9e-20 103.6 82 64.6
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.5e-19 101.7 81 61.7
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 1.4e-17 95.1 143 47.6
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 4.2e-14 83.6 85 51.8
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 8.8e-12 75.9 52 73.1
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 1.7e-10 71.6 72 50.0
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 4.1e-09 67.0 72 47.2
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 4.5e-08 63.5 102 46.1
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 4.2e-06 57.0 40 70.0


User provided reference genes

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