Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000735g0070 Nicotiana tabacum HOM05D003997 ORTHO05D002698 3.7e-69 265.4 206 100.0
Nitab4.5_0000082g0420 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.3e-18 97.4 57 93.0
Nitab4.5_0009392g0020 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.3e-18 97.4 57 93.0
Nitab4.5_0014391g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 4.0e-15 85.9 57 84.2
Nitab4.5_0021549g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 2.0e-14 83.6 56 83.9
Solyc04g017680.3 Solanum lycopersicum HOM05D003997 ORTHO05D002698 5.4e-12 75.5 59 74.6
Sopen04g008760 Solanum pennellii HOM05D003997 ORTHO05D002698 9.2e-12 74.7 59 72.9
Peaxi162Scf00002g03712 Petunia axillaris HOM05D003997 ORTHO05D002698 1.0e-10 71.2 57 71.9
Actinidia37765 Actinidia chinensis HOM05D003997 ORTHO05D002698 3.9e-10 69.3 59 66.1
Nitab4.5_0000970g0110 Nicotiana tabacum HOM05D003997 ORTHO05D285837 3.9e-10 69.3 119 81.5
Dinv25067 Davidia involucrata HOM05D003997 ORTHO05D002698 8.6e-10 68.2 103 46.6
Migut.L01852 Erythranthe guttata HOM05D003997 ORTHO05D002698 1.1e-09 67.8 57 63.2
Migut.O00931 Erythranthe guttata HOM05D003997 ORTHO05D002698 1.1e-09 67.8 57 63.2
Eucgr.H00426 Eucalyptus grandis HOM05D003997 ORTHO05D002698 1.1e-09 67.8 59 62.7
Hma1.2p1_2082F.1_g313570 Hydrangea macrophylla HOM05D003997 ORTHO05D002698 3.3e-09 66.2 59 64.4
vmacro07504 Vaccinium macrocarpon HOM05D003997 ORTHO05D002698 3.3e-09 66.2 57 63.2
MSTRG.10419 Avicennia marina HOM05D003997 ORTHO05D002698 5.6e-09 65.5 57 61.4
Cc06_g06830 Coffea canephora HOM05D003997 ORTHO05D002698 7.3e-09 65.1 59 62.7
Sopen03g008580 Solanum pennellii HOM05D003997 ORTHO05D002698 1.2e-08 64.3 69 59.4
Lj3A736G17 Lonicera japonica HOM05D003997 ORTHO05D002698 1.6e-08 63.9 60 58.3
Rhsim03G0061200 Rhododendron simsii HOM05D003997 ORTHO05D002698 2.1e-08 63.5 57 61.4
Rhsim03G0061700 Rhododendron simsii HOM05D003997 ORTHO05D002698 2.8e-08 63.2 57 61.4
SGA_v2.0_scaffold392G50675 Striga asiatica HOM05D003997 ORTHO05D002698 8.1e-08 61.6 57 59.6
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.1e-07 61.2 52 63.5
TWI53G0181 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 1.8e-07 60.5 59 57.6
GSVIVG01022501001 Vitis vinifera HOM05D003997 ORTHO05D002698 1.8e-07 60.5 103 44.7
Atru.chr8.1304 Acer truncatum HOM05D003997 ORTHO05D002698 4.0e-07 59.3 59 57.6
CSS0008111 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 6.8e-07 58.5 57 59.6
CSS0023244 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 6.8e-07 58.5 57 59.6
CANSAT35G1644 Cannabis sativa HOM05D003997 ORTHO05D002698 6.8e-07 58.5 61 55.7
TAR623G1175 Trochodendron aralioides HOM05D003997 ORTHO05D002698 6.8e-07 58.5 104 43.3
Oeu020171.1 Olea europaea HOM05D003997 ORTHO05D002698 8.9e-07 58.2 57 54.4
TWI74G0953 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 8.9e-07 58.2 59 54.2
CiPaw.08G072600 Carya illinoinensis HOM05D003997 ORTHO05D002698 1.2e-06 57.8 61 55.7
Nn2g14387 Nelumbo nucifera HOM05D003997 ORTHO05D002698 1.2e-06 57.8 58 56.9
Prupe.7G091500 Prunus persica HOM05D003997 ORTHO05D002698 1.5e-06 57.4 61 60.7
QL03p055008 Quercus lobata HOM05D003997 ORTHO05D002698 1.5e-06 57.4 61 55.7
RhsimUnG0113000 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.5e-06 57.4 50 60.0
Cpa.g.sc17.105 Carica papaya HOM05D003997 ORTHO05D002698 2.0e-06 57.0 57 56.1
CiPaw.15G185300 Carya illinoinensis HOM05D003997 ORTHO05D002698 2.0e-06 57.0 61 55.7
Sabra16G0068400 Salix brachista HOM05D003997 ORTHO05D002698 2.0e-06 57.0 57 54.4
COL.COLO4_29520 Corchorus olitorius HOM05D003997 ORTHO05D002698 2.6e-06 56.6 59 54.2
DCAR_013448 Daucus carota HOM05D003997 ORTHO05D002698 3.4e-06 56.2 60 56.7
Manes.08G035900 Manihot esculenta HOM05D003997 ORTHO05D002698 5.8e-06 55.5 58 56.9
Potri.016G067100 Populus trichocarpa HOM05D003997 ORTHO05D002698 5.8e-06 55.5 57 52.6
PGR142G0313 Punica granatum HOM05D003997 ORTHO05D002698 5.8e-06 55.5 53 54.7
QL07p027111 Quercus lobata HOM05D003997 ORTHO05D002698 5.8e-06 55.5 61 55.7
Cfa020087 Carpinus fangiana HOM05D003997 ORTHO05D002698 7.5e-06 55.1 61 54.1
ECA234G3695 Erigeron canadensis HOM05D003997 ORTHO05D002698 7.5e-06 55.1 59 59.3
RcHm_v2.0_Chr3g0476631 Rosa chinensis HOM05D003997 ORTHO05D002698 7.5e-06 55.1 61 57.4
RcHm_v2.0_Chr7g0223381 Rosa chinensis HOM05D003997 ORTHO05D002698 7.5e-06 55.1 61 57.4
Thecc.05G108200 Theobroma cacao HOM05D003997 ORTHO05D002698 7.5e-06 55.1 59 52.5
HanXRQChr17g0562561 Helianthus annuus HOM05D003997 ORTHO05D002698 9.9e-06 54.7 59 61.0
Lj2g0021502 Lotus japonicus HOM05D003997 ORTHO05D002698 9.9e-06 54.7 62 51.6


User provided reference genes

Program Settings