Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 3.0e-131 471.9 237 100.0
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.8e-99 366.3 313 66.5
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 3.9e-91 338.6 236 79.7
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 3.4e-87 325.5 280 68.6
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 2.7e-84 315.8 280 67.1
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 1.1e-74 283.9 197 76.1
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.4e-59 233.8 265 51.7
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 2.3e-59 233.0 207 60.9
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 8.8e-59 231.1 291 51.5
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 7.5e-58 228.0 181 65.2
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 6.3e-57 224.9 290 48.3
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.1e-56 224.2 192 59.9
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 3.1e-56 222.6 250 52.8
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 9.1e-56 221.1 306 47.7
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 1.6e-55 220.3 254 51.6
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 1.6e-55 220.3 272 47.8
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 1.6e-55 220.3 292 45.9
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.7e-55 219.5 178 62.9
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.5e-55 218.8 192 59.4
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 4.5e-55 218.8 242 53.3
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 1.7e-54 216.9 254 50.8
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 2.9e-54 216.1 181 61.3
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 2.9e-54 216.1 290 47.6
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 5.0e-54 215.3 300 48.3
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 6.6e-54 214.9 270 49.6
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 6.6e-54 214.9 221 52.9
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 6.6e-54 214.9 297 47.1
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 8.6e-54 214.5 300 48.3
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 1.5e-53 213.8 199 56.3
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.9e-53 213.4 300 48.0
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 2.5e-53 213.0 251 51.0
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 3.3e-53 212.6 124 88.7
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 4.2e-53 212.2 306 43.5
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 9.5e-53 211.1 296 43.2
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.2e-52 210.7 182 59.9
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 3.6e-52 209.1 176 60.8
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 4.7e-52 208.8 181 59.7
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 6.1e-52 208.4 168 60.1
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 6.1e-52 208.4 192 56.2
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.4e-51 207.2 299 46.2
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.3e-51 206.5 155 62.6
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 2.3e-51 206.5 151 64.9
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 2.3e-51 206.5 161 62.1
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 3.0e-51 206.1 285 46.7
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 8.9e-51 204.5 306 45.1
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 1.2e-50 204.1 297 44.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.2e-50 204.1 298 43.0
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.5e-50 203.8 303 44.9
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.5e-50 203.8 150 64.7
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 2.6e-50 203.0 242 48.8
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 3.4e-50 202.6 150 64.7
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 5.7e-50 201.8 192 55.2
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 5.7e-50 201.8 290 46.9
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 7.5e-50 201.4 302 45.0
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 7.5e-50 201.4 179 58.1
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 7.5e-50 201.4 294 46.6
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 9.8e-50 201.1 294 46.6
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 9.8e-50 201.1 219 50.7
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 9.8e-50 201.1 248 48.4
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 4.9e-49 198.7 167 61.7
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.3e-49 198.4 306 43.8
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 8.3e-49 198.0 296 44.6
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.1e-48 197.6 252 48.0
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 1.4e-48 197.2 187 55.1
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 1.8e-48 196.8 292 44.2
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.8e-48 196.8 288 46.5
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 7.0e-48 194.9 299 44.5
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 2.7e-47 193.0 179 56.4
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 4.5e-47 192.2 284 43.7
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.3e-46 190.7 200 53.0
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.7e-46 190.3 184 59.2
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 5.0e-46 188.7 249 47.0
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 6.6e-46 188.3 241 50.2
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.2e-44 184.1 112 75.0
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 2.8e-44 183.0 304 38.8
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.8e-43 180.3 225 51.6
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 6.8e-43 178.3 210 46.7
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 6.8e-43 178.3 161 58.4
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 1.2e-42 177.6 105 78.1
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 1.2e-42 177.6 178 51.7
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.5e-42 177.2 303 38.3
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 5.8e-42 175.3 247 44.1
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 7.5e-42 174.9 159 57.2
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 4.9e-41 172.2 284 39.1
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 6.4e-41 171.8 147 57.1
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 2.4e-40 169.9 159 56.0
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 5.4e-40 168.7 226 48.2
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 8.6e-38 161.4 214 40.7
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 3.3e-37 159.5 242 39.7
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 9.5e-37 157.9 246 38.6
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 1.2e-36 157.5 178 48.3
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 1.6e-36 157.1 178 48.9
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 3.6e-36 156.0 129 59.7
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 4.7e-36 155.6 176 46.0
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 6.2e-36 155.2 178 48.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.4e-35 154.1 108 64.8
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 1.4e-35 154.1 178 46.6
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 6.8e-35 151.8 160 50.6
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 8.9e-35 151.4 149 50.3
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 5.8e-34 148.7 297 35.7
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.3e-33 147.5 115 61.7
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.3e-33 147.5 115 61.7
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.3e-33 147.5 86 79.1
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 4.9e-33 145.6 106 61.3
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.2e-31 141.0 203 40.9
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 2.3e-30 136.7 137 49.6
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 4.4e-26 122.5 105 57.1
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.4e-24 116.7 205 40.5
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 9.2e-24 114.8 151 44.4
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 2.3e-22 110.2 197 37.6
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 6.4e-17 92.0 306 31.0
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 6.6e-14 82.0 48 75.0
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 3.0e-06 56.6 135 29.6


User provided reference genes

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