Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000733g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 2.8e-49 198.4 103 100.0
PGSC0003DMG400027273 Solanum tuberosum HOM05D003654 ORTHO05D004176 2.8e-25 118.6 103 64.1
Sopen04g007780 Solanum pennellii HOM05D003654 ORTHO05D004176 6.8e-24 114.0 102 61.8
Solyc04g015700.1 Solanum lycopersicum HOM05D003654 ORTHO05D004176 2.6e-23 112.1 102 60.8
Peaxi162Scf00493g00002 Petunia axillaris HOM05D003654 ORTHO05D004176 4.6e-20 101.3 103 55.3
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 3.3e-10 68.6 98 39.8
Cc06_g17070 Coffea canephora HOM05D003654 ORTHO05D004176 7.3e-10 67.4 37 75.7
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 1.3e-09 66.6 98 34.7
Aqoxy7G00792 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 3.6e-09 65.1 36 72.2
ClCG09G003960 Citrullus lanatus HOM05D003654 ORTHO05D004176 4.8e-09 64.7 37 70.3
HanXRQChr03g0062221 Helianthus annuus HOM05D003654 ORTHO05D004176 4.8e-09 64.7 31 83.9
Aqoxy7G00793 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 6.2e-09 64.3 37 70.3
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 6.2e-09 64.3 37 70.3
Gohir.D08G164000 Gossypium hirsutum HOM05D003654 ORTHO05D004176 8.1e-09 63.9 106 36.8
MBI17_g05505_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 8.1e-09 63.9 70 44.3
MBI17_g39959_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 8.1e-09 63.9 70 44.3
Gorai.004G171000 Gossypium raimondii HOM05D003654 ORTHO05D004176 1.1e-08 63.5 106 36.8
CsaV3_7G030860 Cucumis sativus L. HOM05D003654 ORTHO05D004176 1.4e-08 63.2 37 67.6
Lsat_1_v5_gn_9_28901 Lactuca sativa HOM05D003654 ORTHO05D004176 1.4e-08 63.2 43 60.5
Nn2g15256 Nelumbo nucifera HOM05D003654 ORTHO05D004176 1.4e-08 63.2 37 70.3
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 1.4e-08 63.2 31 80.6
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 1.8e-08 62.8 30 83.3
Sc10g0000210 Simmondsia chinensis HOM05D003654 ORTHO05D004176 1.8e-08 62.8 31 80.6
BcaC07g40378 Brassica carinata HOM05D003654 ORTHO05D004176 2.4e-08 62.4 37 67.6
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 2.4e-08 62.4 37 67.6
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 2.4e-08 62.4 37 67.6
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 2.4e-08 62.4 37 67.6
BraA09t40486Z Brassica rapa HOM05D003654 ORTHO05D004176 2.4e-08 62.4 37 67.6
Hma1.2p1_2266F.1_g318430 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 2.4e-08 62.4 88 35.2
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 3.1e-08 62.0 31 77.4
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 3.1e-08 62.0 37 67.6
AUR62023084 Chenopodium quinoa HOM05D003654 ORTHO05D004176 3.1e-08 62.0 30 80.0
Rhsim07G0057900 Rhododendron simsii HOM05D003654 ORTHO05D004176 3.1e-08 62.0 41 61.0
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 3.1e-08 62.0 35 68.6
Atru.chr1.1088 Acer truncatum HOM05D003654 ORTHO05D004176 4.0e-08 61.6 31 77.4
Ca_08602_v3 Cicer arietinum L. HOM05D003654 ORTHO05D004176 4.0e-08 61.6 41 63.4
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 4.0e-08 61.6 31 77.4
DCAR_020491 Daucus carota HOM05D003654 ORTHO05D004176 4.0e-08 61.6 30 80.0
Manes.10G139300 Manihot esculenta HOM05D003654 ORTHO05D004176 4.0e-08 61.6 36 66.7
Atru.chr1.1087 Acer truncatum HOM05D003654 ORTHO05D004176 5.3e-08 61.2 31 74.2
MBI17_g18370_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 5.3e-08 61.2 34 73.5
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 5.3e-08 61.2 30 80.0
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 6.9e-08 60.8 30 80.0
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 6.9e-08 60.8 30 80.0
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 6.9e-08 60.8 30 80.0
CiPaw.09G037900 Carya illinoinensis HOM05D003654 ORTHO05D004176 6.9e-08 60.8 30 76.7
Thhalv10006420m.g Eutrema salsugineum HOM05D003654 ORTHO05D004176 6.9e-08 60.8 37 64.9
Gohir.D11G328950 Gossypium hirsutum HOM05D003654 ORTHO05D004176 6.9e-08 60.8 33 69.7
Gorai.007G360300 Gossypium raimondii HOM05D003654 ORTHO05D004176 6.9e-08 60.8 33 69.7
HanXRQChr03g0062211 Helianthus annuus HOM05D003654 ORTHO05D004176 6.9e-08 60.8 39 64.1
Actinidia19408 Actinidia chinensis HOM05D003654 ORTHO05D004176 9.0e-08 60.5 28 85.7
Gohir.A11G312450 Gossypium hirsutum HOM05D003654 ORTHO05D004176 9.0e-08 60.5 33 66.7
Lsat_1_v5_gn_9_28881 Lactuca sativa HOM05D003654 ORTHO05D004176 9.0e-08 60.5 31 74.2
Lsat_1_v5_gn_9_28921 Lactuca sativa HOM05D003654 ORTHO05D004176 9.0e-08 60.5 31 74.2
Lsat_1_v5_gn_9_28941 Lactuca sativa HOM05D003654 ORTHO05D004176 9.0e-08 60.5 31 74.2
Lj9P638T60 Lonicera japonica HOM05D003654 ORTHO05D004176 9.0e-08 60.5 28 85.7
SEGI_17870 Sequoiadendron giganteum HOM05D003654 ORTHO05D004176 9.0e-08 60.5 36 72.2
CiPaw.13G007300 Carya illinoinensis HOM05D003654 ORTHO05D004176 1.2e-07 60.1 28 85.7
ClCG10G017020 Citrullus lanatus HOM05D003654 ORTHO05D004176 1.2e-07 60.1 31 74.2
Haze_19862 Corylus avellana HOM05D003654 ORTHO05D004176 1.2e-07 60.1 43 58.1
CsaV3_3G039380 Cucumis sativus L. HOM05D003654 ORTHO05D004176 1.2e-07 60.1 31 74.2
QL04p008848 Quercus lobata HOM05D003654 ORTHO05D004176 1.2e-07 60.1 28 85.7
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.5e-07 59.7 37 67.6
MELO3C009681.2 Cucumis melo HOM05D003654 ORTHO05D004176 1.5e-07 59.7 37 62.2
Gorai.006G136800 Gossypium raimondii HOM05D003654 ORTHO05D004176 1.5e-07 59.7 30 76.7
Potri.001G263404 Populus trichocarpa HOM05D003654 ORTHO05D004176 1.5e-07 59.7 34 64.7
Sabra16G0161800 Salix brachista HOM05D003654 ORTHO05D004176 1.5e-07 59.7 30 73.3
ATR0626G251 Amborella trichopoda HOM05D003654 ORTHO05D004176 2.6e-07 58.9 35 68.6
Gohir.A09G122400 Gossypium hirsutum HOM05D003654 ORTHO05D004176 2.6e-07 58.9 36 66.7
Gohir.D09G118500 Gossypium hirsutum HOM05D003654 ORTHO05D004176 2.6e-07 58.9 36 66.7
Zm00001eb301890 Zea mays HOM05D003654 ORTHO05D004176 2.6e-07 58.9 30 73.3
Aqoxy7G00798 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 3.4e-07 58.5 31 77.4
MELO3C023573.2 Cucumis melo HOM05D003654 ORTHO05D004176 3.4e-07 58.5 28 82.1
MBI17_g45827_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 3.4e-07 58.5 73 41.1
Nn5g30179 Nelumbo nucifera HOM05D003654 ORTHO05D004176 3.4e-07 58.5 29 82.8
QL07p000287 Quercus lobata HOM05D003654 ORTHO05D004176 3.4e-07 58.5 36 63.9
Ah.10g038700 Amaranthus hybridus HOM05D003654 ORTHO05D004176 4.5e-07 58.2 37 62.2
EL10Ac2g04348 Beta vulgaris HOM05D003654 ORTHO05D004176 4.5e-07 58.2 27 85.2
Ciclev10033218m.g Citrus clementina HOM05D003654 ORTHO05D004176 4.5e-07 58.2 30 73.3
Gohir.A08G143100 Gossypium hirsutum HOM05D003654 ORTHO05D004176 4.5e-07 58.2 27 85.2
Nn1g05869 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.5e-07 58.2 28 85.7
Peaxi162Scf00071g01140 Petunia axillaris HOM05D003654 ORTHO05D004176 4.5e-07 58.2 33 66.7
Phvul.003G048800 Phaseolus vulgaris HOM05D003654 ORTHO05D004176 4.5e-07 58.2 37 64.9
Phvul.003G066700 Phaseolus vulgaris HOM05D003654 ORTHO05D004176 4.5e-07 58.2 35 68.6
Sp5g05150 Schrenkiella parvula HOM05D003654 ORTHO05D004176 4.5e-07 58.2 27 85.2
CANSAT80G0428 Cannabis sativa HOM05D003654 ORTHO05D004176 5.8e-07 57.8 103 36.9
CDE11G0735 Ceratophyllum demersum HOM05D003654 ORTHO05D004176 5.8e-07 57.8 31 74.2
PGSC0003DMG400006790 Solanum tuberosum HOM05D003654 ORTHO05D004176 5.8e-07 57.8 41 58.5
Atru.chr11.2594 Acer truncatum HOM05D003654 ORTHO05D004176 7.6e-07 57.4 28 82.1
ATR0626G210 Amborella trichopoda HOM05D003654 ORTHO05D004176 7.6e-07 57.4 35 65.7
Nitab4.5_0006340g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 7.6e-07 57.4 31 67.7
Zm00001eb215460 Zea mays HOM05D003654 ORTHO05D004176 7.6e-07 57.4 29 79.3
Glyma.05G150100 Glycine max HOM05D003654 ORTHO05D004176 9.9e-07 57.0 37 64.9
Glyma.08G106900 Glycine max HOM05D003654 ORTHO05D004176 9.9e-07 57.0 37 64.9
Gohir.D09G118550 Gossypium hirsutum HOM05D003654 ORTHO05D004176 9.9e-07 57.0 30 73.3
Gorai.006G136900 Gossypium raimondii HOM05D003654 ORTHO05D004176 9.9e-07 57.0 30 73.3
Nitab4.5_0006340g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 9.9e-07 57.0 37 62.2
Sed0004161 Sechium edule HOM05D003654 ORTHO05D004176 1.3e-06 56.6 29 72.4
Solyc01g087580.3 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.3e-06 56.6 30 70.0
Sopen01g034550 Solanum pennellii HOM05D003654 ORTHO05D004176 1.3e-06 56.6 30 70.0
Solyc01g087570.2 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.7e-06 56.2 37 59.5
Sopen01g034540 Solanum pennellii HOM05D003654 ORTHO05D004176 1.7e-06 56.2 37 59.5
Hma1.2p1_0226F.1_g095570 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 2.2e-06 55.8 37 56.8
Sed0002974 Sechium edule HOM05D003654 ORTHO05D004176 2.2e-06 55.8 31 67.7
Sed0005344 Sechium edule HOM05D003654 ORTHO05D004176 2.2e-06 55.8 31 71.0
BraA07t30006Z Brassica rapa HOM05D003654 ORTHO05D004176 2.9e-06 55.5 27 77.8
Lalb_Chr25g0282791 Lupinus albus HOM05D003654 ORTHO05D004176 2.9e-06 55.5 29 75.9
Manes.07G007900 Manihot esculenta HOM05D003654 ORTHO05D004176 2.9e-06 55.5 26 88.5
Nitab4.5_0000707g0220 Nicotiana tabacum HOM05D003654 ORTHO05D004176 2.9e-06 55.5 37 59.5
Os10g0417300 Oryza sativa ssp. japonica HOM05D003654 ORTHO05D004176 2.9e-06 55.5 41 56.1
Prupe.7G061500 Prunus persica HOM05D003654 ORTHO05D004176 2.9e-06 55.5 27 77.8
HPP92_012497 Vanilla planifolia HOM05D003654 ORTHO05D004176 2.9e-06 55.5 29 69.0
AUR62009401 Chenopodium quinoa HOM05D003654 ORTHO05D004176 3.8e-06 55.1 26 80.8
PGSC0003DMG400006788 Solanum tuberosum HOM05D003654 ORTHO05D004176 3.8e-06 55.1 30 66.7
DCAR_022378 Daucus carota HOM05D003654 ORTHO05D004176 4.9e-06 54.7 36 61.1
Sed0011402 Sechium edule HOM05D003654 ORTHO05D004176 4.9e-06 54.7 26 84.6
Eucgr.H02820 Eucalyptus grandis HOM05D003654 ORTHO05D004176 6.4e-06 54.3 36 58.3
Sabra06G0035500 Salix brachista HOM05D000131 ORTHO05D004176 6.4e-06 54.3 27 77.8
AL5G39020 Arabidopsis lyrata HOM05D003654 ORTHO05D004176 8.4e-06 53.9 26 80.8
Migut.B01278 Erythranthe guttata HOM05D003654 ORTHO05D004176 8.4e-06 53.9 101 33.7


User provided reference genes

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