Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000732g0060 Nicotiana tabacum HOM05D001951 ORTHO05D008049 3.8e-60 234.6 113 100.0
Aa31LG5G16690 Aethionema arabicum HOM05D001951 ORTHO05D008049 1.7e-15 86.3 48 81.2
AT3G06180 Arabidopsis thaliana HOM05D001951 ORTHO05D008049 1.7e-15 86.3 48 81.2
Carub.0003s0562 Capsella rubella HOM05D001951 ORTHO05D008049 1.7e-15 86.3 48 81.2
AL3G17040 Arabidopsis lyrata HOM05D001951 ORTHO05D008049 3.7e-15 85.1 48 79.2
Sp3g05140 Schrenkiella parvula HOM05D001951 ORTHO05D008049 4.9e-15 84.7 48 77.1
Nitab4.5_0003162g0060 Nicotiana tabacum HOM05D001951 ORTHO05D008049 1.4e-14 83.2 55 70.9
Sed0025587 Sechium edule HOM05D001951 ORTHO05D008049 2.4e-14 82.4 49 71.4
Peaxi162Scf00095g01016 Petunia axillaris HOM05D001951 ORTHO05D008049 4.1e-14 81.6 42 88.1
Solyc01g080180.3 Solanum lycopersicum HOM05D001951 ORTHO05D008049 4.1e-14 81.6 42 88.1
PGSC0003DMG400004360 Solanum tuberosum HOM05D001951 ORTHO05D008049 4.1e-14 81.6 42 88.1
BolC1t05635H Brassica oleracea HOM05D001951 ORTHO05D008049 5.4e-14 81.3 48 75.0
BraA01t04450Z Brassica rapa HOM05D001951 ORTHO05D008049 5.4e-14 81.3 48 75.0
Hma1.2p1_0511F.1_g169090 Hydrangea macrophylla HOM05D001951 ORTHO05D008049 9.2e-14 80.5 42 85.7
Dinv38385 Davidia involucrata HOM05D001951 ORTHO05D008049 1.2e-13 80.1 42 85.7
Sopen01g031960 Solanum pennellii HOM05D001951 ORTHO05D008049 1.6e-13 79.7 35 100.0
THA.LOC104818788 Tarenaya hassleriana HOM05D001951 ORTHO05D008049 1.6e-13 79.7 48 75.0
Aa31LG11G10700 Aethionema arabicum HOM05D001951 ORTHO05D008049 2.0e-13 79.3 48 72.9
GSVIVG01017881001 Vitis vinifera HOM05D001951 ORTHO05D008049 2.0e-13 79.3 48 72.9
Actinidia40195 Actinidia chinensis HOM05D001951 ORTHO05D008049 3.5e-13 78.6 50 72.0
Potri.010G030000 Populus trichocarpa HOM05D001951 ORTHO05D008049 3.5e-13 78.6 39 89.7
Sabra08G0159600 Salix brachista HOM05D001951 ORTHO05D008049 3.5e-13 78.6 36 91.7
THA.LOC104822313 Tarenaya hassleriana HOM05D001951 ORTHO05D008049 3.5e-13 78.6 46 73.9
Sabra10G0011300 Salix brachista HOM05D001951 ORTHO05D008049 4.6e-13 78.2 36 94.4
ClCG06G005760 Citrullus lanatus HOM05D001951 ORTHO05D008049 6.0e-13 77.8 36 88.9
MELO3C021397.2 Cucumis melo HOM05D001951 ORTHO05D008049 6.0e-13 77.8 36 88.9
CsaV3_6G018540 Cucumis sativus L. HOM05D001951 ORTHO05D008049 6.0e-13 77.8 36 88.9
FAN07G0345 Fragaria x ananassa HOM05D001951 ORTHO05D008049 6.0e-13 77.8 36 91.7
CSS0017955 Camellia sinensis var. sinensis HOM05D001951 ORTHO05D008049 7.8e-13 77.4 42 81.0
Cfa015576 Carpinus fangiana HOM05D001951 ORTHO05D008049 7.8e-13 77.4 48 70.8
CiPaw.02G091400 Carya illinoinensis HOM05D001951 ORTHO05D008049 7.8e-13 77.4 42 78.6
Potri.008G201700 Populus trichocarpa HOM05D001951 ORTHO05D008049 1.0e-12 77.0 39 84.6
vmacro08271 Vaccinium macrocarpon HOM05D001951 ORTHO05D008049 1.0e-12 77.0 37 86.5
MSTRG.10020 Avicennia marina HOM05D001951 ORTHO05D008049 1.3e-12 76.6 42 81.0
CARHR193980 Cardamine hirsuta HOM05D001951 ORTHO05D008049 1.3e-12 76.6 48 70.8
Cpa.g.sc16.32 Carica papaya HOM05D001951 ORTHO05D008049 1.3e-12 76.6 35 94.3
Dinv44476 Davidia involucrata HOM05D001951 ORTHO05D008049 1.3e-12 76.6 42 83.3
Gohir.A10G113200 Gossypium hirsutum HOM05D001951 ORTHO05D008049 1.3e-12 76.6 42 78.6
Manes.03G185400 Manihot esculenta HOM05D001951 ORTHO05D008049 1.3e-12 76.6 48 68.8
Nn1g02143 Nelumbo nucifera HOM05D001951 ORTHO05D008049 1.3e-12 76.6 48 72.9
Oeu029302.1 Olea europaea HOM05D001951 ORTHO05D008049 1.3e-12 76.6 35 94.3
AL6G30380 Arabidopsis lyrata HOM05D001951 ORTHO05D008049 1.7e-12 76.3 48 70.8
MSTRG.3986 Avicennia marina HOM05D001951 ORTHO05D008049 1.7e-12 76.3 42 81.0
FvH4_4g14400 Fragaria vesca HOM05D001951 ORTHO05D008049 1.7e-12 76.3 39 84.6
FAN12G2276 Fragaria x ananassa HOM05D001951 ORTHO05D008049 1.7e-12 76.3 39 84.6
FAN17G0265 Fragaria x ananassa HOM05D001951 ORTHO05D008049 1.7e-12 76.3 39 84.6
FAN22G1167 Fragaria x ananassa HOM05D001951 ORTHO05D008049 1.7e-12 76.3 39 84.6
SalBow2G0680 Salvia bowleyana HOM05D001951 ORTHO05D008049 1.7e-12 76.3 35 94.3
Atru.chr4.2581 Acer truncatum HOM05D001951 ORTHO05D008049 2.3e-12 75.9 48 70.8
Duzib151G0504 Durio zibethinus HOM05D001951 ORTHO05D008049 2.3e-12 75.9 39 82.1
Prupe.1G150300 Prunus persica HOM05D001951 ORTHO05D008049 2.3e-12 75.9 37 86.5
Manes.15G022200 Manihot esculenta HOM05D001951 ORTHO05D008049 3.0e-12 75.5 46 69.6
QL06p005435 Quercus lobata HOM05D001951 ORTHO05D008049 3.0e-12 75.5 35 91.4
Rhsim04G0207500 Rhododendron simsii HOM05D001951 ORTHO05D008049 3.0e-12 75.5 35 88.6
TAR365G0042 Trochodendron aralioides HOM05D000321 ORTHO05D000204 3.0e-12 75.5 51 66.7
Aqoxy2G03239 Aquilegia oxysepala HOM05D001951 ORTHO05D008049 3.9e-12 75.1 35 91.4
CANSAT78G1560 Cannabis sativa HOM05D001951 ORTHO05D008049 3.9e-12 75.1 35 88.6
Gohir.D10G152966 Gossypium hirsutum HOM05D001951 ORTHO05D008049 3.9e-12 75.1 35 88.6
Gorai.011G170000 Gossypium raimondii HOM05D001951 ORTHO05D008049 3.9e-12 75.1 35 88.6
Lalb_Chr15g0087351 Lupinus albus HOM05D001951 ORTHO05D008049 3.9e-12 75.1 46 69.6
PSO170G4439 Papaver somniferum HOM05D001951 ORTHO05D008049 3.9e-12 75.1 50 66.0
CiPaw.01G159300 Carya illinoinensis HOM05D001951 ORTHO05D008049 5.0e-12 74.7 45 71.1
PGR031G2492 Punica granatum HOM05D001951 ORTHO05D008049 5.0e-12 74.7 39 79.5
Thecc.04G220800 Theobroma cacao HOM05D001951 ORTHO05D008049 5.0e-12 74.7 39 79.5
Haze_00970 Corylus avellana HOM05D001951 ORTHO05D008049 6.6e-12 74.3 35 88.6
Migut.G00259 Erythranthe guttata HOM05D001951 ORTHO05D008049 6.6e-12 74.3 42 76.2
Nn4g26172 Nelumbo nucifera HOM05D001951 ORTHO05D008049 6.6e-12 74.3 48 72.9
Sp6g25360 Schrenkiella parvula HOM05D001951 ORTHO05D008049 8.6e-12 73.9 48 68.8
AT5G19025 Arabidopsis thaliana HOM05D001951 ORTHO05D008049 1.1e-11 73.6 48 66.7
SGA_v2.0_scaffold142G35605 Striga asiatica HOM05D001951 ORTHO05D008049 1.1e-11 73.6 42 73.8
MD16G1182900 Malus domestica HOM05D001951 ORTHO05D008049 1.5e-11 73.2 46 71.7
A10p20660 Brassica napus HOM05D001951 ORTHO05D008049 1.9e-11 72.8 50 70.0
BraA10t44129Z Brassica rapa HOM05D001951 ORTHO05D008049 1.9e-11 72.8 50 70.0
Carub.0006s1734 Capsella rubella HOM05D001951 ORTHO05D008049 1.9e-11 72.8 48 68.8
CDE02G1964 Ceratophyllum demersum HOM05D001951 ORTHO05D008049 1.9e-11 72.8 35 85.7
Lalb_Chr20g0118381 Lupinus albus HOM05D001951 ORTHO05D008049 1.9e-11 72.8 35 82.9
RcHm_v2.0_Chr4g0418491 Rosa chinensis HOM05D001951 ORTHO05D008049 1.9e-11 72.8 39 82.1
DCAR_024574 Daucus carota HOM05D001951 ORTHO05D008049 2.5e-11 72.4 35 85.7
Thhalv10014423m.g Eutrema salsugineum HOM05D001951 ORTHO05D008049 2.5e-11 72.4 40 80.0
Lsat_1_v5_gn_5_76980 Lactuca sativa HOM05D001951 ORTHO05D008049 2.5e-11 72.4 43 81.4
BcaB04g21324 Brassica carinata HOM05D001951 ORTHO05D008049 3.3e-11 72.0 35 88.6
BcaC09g47878 Brassica carinata HOM05D001951 ORTHO05D008049 3.3e-11 72.0 35 88.6
Ciclev10005941m.g Citrus clementina HOM05D001951 ORTHO05D008049 3.3e-11 72.0 39 79.5
CDE09G0080 Ceratophyllum demersum HOM05D001951 ORTHO05D008049 4.3e-11 71.6 35 82.9
Ah.13g074270 Amaranthus hybridus HOM05D001951 ORTHO05D008049 5.6e-11 71.2 35 82.9
TWI53G0672 Tripterygium wilfordii HOM05D001951 ORTHO05D008049 5.6e-11 71.2 35 88.6
TAR636G2172 Trochodendron aralioides HOM05D001951 ORTHO05D008049 5.6e-11 71.2 35 85.7
AUR62030061 Chenopodium quinoa HOM05D001951 ORTHO05D008049 7.3e-11 70.9 35 82.9
Oeu042781.1 Olea europaea HOM05D001951 ORTHO05D008049 7.3e-11 70.9 35 88.6
Lj6A563T52 Lonicera japonica HOM05D001951 ORTHO05D008049 9.5e-11 70.5 35 85.7
MD13G1182400 Malus domestica HOM05D001951 ORTHO05D008049 9.5e-11 70.5 46 69.6
HanXRQChr10g0310381 Helianthus annuus HOM05D001951 ORTHO05D008049 1.2e-10 70.1 43 79.1
arahy.Tifrunner.gnm1.ann1.2PKL34 Arachis hypogaea HOM05D001951 ORTHO05D008049 1.6e-10 69.7 35 80.0
arahy.Tifrunner.gnm1.ann1.71XP3A Arachis hypogaea HOM05D001951 ORTHO05D008049 1.6e-10 69.7 35 80.0
Cc03_g03050 Coffea canephora HOM05D001951 ORTHO05D008049 1.6e-10 69.7 42 76.2
ECA234G0663 Erigeron canadensis HOM05D001951 ORTHO05D008049 2.1e-10 69.3 35 88.6
unitig_748.g8350 Utricularia gibba HOM05D001951 ORTHO05D008049 2.1e-10 69.3 35 85.7
BolC9t58614H Brassica oleracea HOM05D001951 ORTHO05D009507 2.8e-10 68.9 40 80.0
C09p57450 Brassica napus HOM05D001951 ORTHO05D008049 3.6e-10 68.6 50 68.0
RcHm_v2.0_Chr4g0415911 Rosa chinensis HOM05D001951 ORTHO05D008049 3.6e-10 68.6 35 85.7
Sc13g0003900 Simmondsia chinensis HOM05D001951 ORTHO05D008049 3.6e-10 68.6 39 76.9
SGA_v2.0_scaffold166G38383 Striga asiatica HOM05D001951 ORTHO05D008049 1.1e-09 67.0 44 72.7
Phvul.006G154500 Phaseolus vulgaris HOM05D001951 ORTHO05D008049 1.4e-09 66.6 46 65.2
Zm00001eb287370 Zea mays HOM05D001951 ORTHO05D008049 1.4e-09 66.6 42 71.4
Zm00001eb350930 Zea mays HOM05D001951 ORTHO05D008049 1.8e-09 66.2 42 69.0
BcaB08g36625 Brassica carinata HOM05D001951 ORTHO05D008049 2.3e-09 65.9 36 83.3
BcaB08g36626 Brassica carinata HOM05D001951 ORTHO05D008049 3.1e-09 65.5 35 85.7
Glyma.13G209500 Glycine max HOM05D001951 ORTHO05D008049 3.1e-09 65.5 48 62.5
BcaC04g18626 Brassica carinata HOM05D001951 ORTHO05D008049 4.0e-09 65.1 35 85.7
Ca_00617_v3 Cicer arietinum L. HOM05D001951 ORTHO05D008049 8.9e-09 63.9 39 69.2
Os05g0393200 Oryza sativa ssp. japonica HOM05D001951 ORTHO05D008049 1.2e-08 63.5 33 75.8
EL10Ac3g06334 Beta vulgaris HOM05D001951 ORTHO05D008049 1.5e-08 63.2 35 77.1
Glyma.15G103200 Glycine max HOM05D001951 ORTHO05D008049 1.5e-08 63.2 48 60.4
VMungo0540G1421 Vigna mungo HOM05D001951 ORTHO05D008049 1.5e-08 63.2 35 77.1
Lj6g0006220 Lotus japonicus HOM05D001951 ORTHO05D008049 3.4e-08 62.0 48 60.4
MBI05_g42874_MAGBIO Magnolia biondii HOM05D001951 ORTHO05D003675 3.4e-08 62.0 76 43.4
ATR0564G331 Amborella trichopoda HOM05D001951 ORTHO05D003675 5.8e-08 61.2 46 52.2
DCAR_002419 Daucus carota HOM05D001951 ORTHO05D008049 5.8e-08 61.2 35 74.3
SMO236G0127 Selaginella moellendorffii HOM05D001951 ORTHO05D003675 7.5e-08 60.8 35 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3662 Anthoceros agrestis HOM05D001951 ORTHO05D003675 9.9e-08 60.5 35 65.7
TPR.G13779 Trifolium pratense HOM05D001951 ORTHO05D008049 9.9e-08 60.5 37 70.3
Mapoly0008s0206 Marchantia polymorpha HOM05D001951 ORTHO05D003675 3.7e-07 58.5 36 69.4
ATR0068G031 Amborella trichopoda HOM05D001951 ORTHO05D003675 6.4e-07 57.8 35 68.6
Medtr2g021720 Medicago truncatula HOM05D001951 ORTHO05D008049 8.3e-07 57.4 48 56.2
Os01g0815100 Oryza sativa ssp. japonica HOM05D001951 ORTHO05D003675 1.1e-06 57.0 35 68.6
Os05g0488500 Oryza sativa ssp. japonica HOM05D001951 ORTHO05D003675 1.1e-06 57.0 35 68.6
SEGI_24439 Sequoiadendron giganteum HOM05D001951 ORTHO05D003675 1.4e-06 56.6 35 65.7
Zm00001eb369090 Zea mays HOM05D001951 ORTHO05D003675 2.4e-06 55.8 35 65.7
SGA_v2.0_scaffold3G01695 Striga asiatica HOM05D001951 ORTHO05D003675 3.2e-06 55.5 35 65.7
ATR0626G020 Amborella trichopoda HOM05D001951 ORTHO05D008049 5.4e-06 54.7 33 72.7
HPP92_014368 Vanilla planifolia HOM05D001951 ORTHO05D003675 5.4e-06 54.7 35 60.0
ECA233G5005 Erigeron canadensis HOM05D001951 ORTHO05D003675 7.1e-06 54.3 35 68.6
HanXRQChr01g0021471 Helianthus annuus HOM05D001951 ORTHO05D003675 9.2e-06 53.9 35 65.7


User provided reference genes

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