Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000727g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 7.3e-92 340.5 168 100.0
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-63 245.4 145 83.4
Nitab4.5_0005190g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000482 3.1e-34 149.1 267 40.8
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 5.3e-34 148.3 275 37.5
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 5.2e-29 131.7 81 77.8
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.8e-26 123.2 74 79.7
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.1e-26 122.1 71 81.7
Nitab4.5_0003824g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.4e-26 121.7 71 81.7
Nitab4.5_0005997g0040 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.1e-26 120.9 69 85.5
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.6e-25 120.2 219 36.5
Nitab4.5_0009434g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 5.9e-25 118.2 77 80.5
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.3e-24 117.1 71 78.9
Nitab4.5_0021924g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.5e-23 113.6 74 78.4
Nitab4.5_0000253g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.6e-22 110.2 98 50.0
Nitab4.5_0009434g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.0e-22 107.8 92 62.0
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.0e-22 107.8 71 74.6
Nitab4.5_0000384g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.0e-21 105.9 188 34.0
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 3.0e-21 105.9 71 73.2
Nitab4.5_0001109g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.5e-20 103.6 71 64.8
Nitab4.5_0009593g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.6e-20 102.8 70 74.3
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.4e-20 102.4 67 68.7
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.8e-20 100.9 71 64.8
Nitab4.5_0003401g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.3e-19 100.5 65 67.7
Nitab4.5_0003261g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 2.2e-19 99.8 65 70.8
Nitab4.5_0000409g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.8e-19 99.4 71 64.8
Nitab4.5_0000022g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.3e-19 97.8 72 66.7
Nitab4.5_0014106g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.4e-18 97.1 55 81.8
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.8e-18 96.7 81 60.5
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 5.4e-18 95.1 67 65.7
Nitab4.5_0000229g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.2e-18 94.4 82 57.3
Nitab4.5_0013206g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.2e-17 94.0 55 83.6
Nitab4.5_0001914g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.3e-16 89.7 86 53.5
Nitab4.5_0001024g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.6e-16 87.8 71 57.7
Nitab4.5_0000701g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.1e-15 87.4 59 66.1
Nitab4.5_0003525g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.9e-15 86.7 55 72.7
Nitab4.5_0000104g0270 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.0e-12 76.6 55 61.8
Nitab4.5_0003250g0070 Nicotiana tabacum HOM05D000060 ORTHO05D000434 2.0e-12 76.6 65 60.0
Nitab4.5_0000001g0290 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.9e-11 72.8 71 46.5
Nitab4.5_0005377g0020 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.4e-11 71.6 57 52.6
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 2.0e-09 66.6 110 37.3
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 3.5e-09 65.9 138 31.2
Nitab4.5_0001724g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.5e-09 65.9 47 59.6
Peaxi162Scf00025g00324 Petunia axillaris HOM05D037237 ORTHO05D037292 5.9e-09 65.1 101 31.7
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 7.8e-09 64.7 110 38.2
Nitab4.5_0000013g0160 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.0e-08 64.3 73 41.1
Nitab4.5_0001914g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.0e-08 64.3 43 74.4
Nitab4.5_0001969g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-08 64.3 108 36.1
Nitab4.5_0006538g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.7e-08 63.5 105 34.3
CANSAT80G0461 Cannabis sativa HOM05D008721 ORTHO05D000137 2.3e-08 63.2 73 45.2
Sopen09g029010 Solanum pennellii HOM05D000679 ORTHO05D000137 2.3e-08 63.2 110 36.4
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.9e-08 62.4 95 36.8
Nitab4.5_0014450g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000482 3.9e-08 62.4 59 55.9
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.6e-08 61.6 107 34.6
CANSAT25G1307 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-07 60.8 60 50.0
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.5e-07 60.5 67 47.8
Nitab4.5_0001730g0180 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.5e-07 60.5 57 47.4
Peaxi162Scf00130g00004 Petunia axillaris HOM05D010453 ORTHO05D012004 1.5e-07 60.5 97 36.1
Peaxi162Scf00341g00032 Petunia axillaris HOM05D010453 ORTHO05D012004 1.5e-07 60.5 97 36.1
Peaxi162Scf00535g00027 Petunia axillaris HOM05D010453 ORTHO05D012004 1.5e-07 60.5 97 36.1
Solyc03g034203.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.5e-07 60.5 64 43.8
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 1.5e-07 60.5 110 35.5
PGSC0003DMG400045185 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.5e-07 60.5 104 37.5
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 1.9e-07 60.1 68 45.6
Nitab4.5_0003994g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-07 60.1 113 32.7
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-07 60.1 107 34.6
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 2.5e-07 59.7 63 47.6
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 2.5e-07 59.7 60 48.3
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.5e-07 59.7 73 43.8
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 3.3e-07 59.3 60 48.3
Nitab4.5_0005377g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.3e-07 59.3 43 53.5
Nitab4.5_0007365g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.3e-07 59.3 62 43.5
CANSAT78G0758 Cannabis sativa HOM05D008721 ORTHO05D000137 4.3e-07 58.9 60 48.3
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.3e-07 58.9 78 37.2
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-07 58.5 67 46.3
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-07 58.5 67 46.3
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-07 58.5 67 46.3
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-07 58.5 67 46.3
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 7.3e-07 58.2 64 46.9
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.3e-07 58.2 167 29.9
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.3e-07 58.2 57 47.4
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 58.2 107 33.6
Sopen06g011260 Solanum pennellii HOM05D000679 ORTHO05D000137 7.3e-07 58.2 107 32.7
ATR0365G002 Amborella trichopoda HOM05D008636 ORTHO05D000137 9.5e-07 57.8 81 39.5
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 9.5e-07 57.8 71 40.8
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 9.5e-07 57.8 71 40.8
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 9.5e-07 57.8 63 47.6
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 9.5e-07 57.8 71 40.8
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 9.5e-07 57.8 67 46.3
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.5e-07 57.8 97 41.2
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.5e-07 57.8 76 43.4
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 9.5e-07 57.8 107 33.6
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 9.5e-07 57.8 107 33.6
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 9.5e-07 57.8 107 33.6
Nitab4.5_0000077g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.6e-06 57.0 52 44.2
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-06 57.0 73 42.5
Solyc08g074525.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.6e-06 57.0 107 33.6
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-06 56.6 71 39.4
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-06 56.6 71 39.4
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-06 56.6 71 39.4
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 2.1e-06 56.6 67 46.3
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.1e-06 56.6 73 42.5
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-06 56.6 107 32.7
CANSAT64G1018 Cannabis sativa HOM05D008721 ORTHO05D000137 2.8e-06 56.2 58 44.8
Peaxi162Scf00097g00213 Petunia axillaris HOM05D010453 ORTHO05D012004 2.8e-06 56.2 97 34.0
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.8e-06 56.2 107 32.7
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.8e-06 56.2 107 32.7
Sopen06g003810 Solanum pennellii HOM05D000679 ORTHO05D000137 2.8e-06 56.2 107 32.7
CANSAT25G1221 Cannabis sativa HOM05D008636 ORTHO05D000137 3.6e-06 55.8 71 39.4
CAN.G326.12 Capsicum annuum HOM05D000679 ORTHO05D000137 3.6e-06 55.8 142 28.9
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.6e-06 55.8 61 45.9
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.6e-06 55.8 57 45.6
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 3.6e-06 55.8 106 33.0
Sopen05g010340 Solanum pennellii HOM05D000679 ORTHO05D000137 3.6e-06 55.8 91 36.3
PGSC0003DMG400037187 Solanum tuberosum HOM05D000017 ORTHO05D001349 3.6e-06 55.8 90 36.7
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 4.7e-06 55.5 67 41.8
Nitab4.5_0000831g0110 Nicotiana tabacum HOM05D005063 ORTHO05D016873 4.7e-06 55.5 62 43.5
Solyc08g014618.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.7e-06 55.5 57 45.6
Solyc08g016583.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.7e-06 55.5 57 45.6
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 6.2e-06 55.1 61 42.6
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.2e-06 55.1 64 46.9
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 6.2e-06 55.1 82 40.2
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 8.0e-06 54.7 71 38.0
CANSAT35G0235 Cannabis sativa HOM05D008636 ORTHO05D000137 8.0e-06 54.7 71 38.0
CAN.G416.38 Capsicum annuum HOM05D001361 ORTHO05D005105 8.0e-06 54.7 63 42.9
Nitab4.5_0000022g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.0e-06 54.7 76 34.2


User provided reference genes

Program Settings