Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.1e-137 491.9 265 100.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 7.2e-134 480.7 265 96.6
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.5e-131 473.0 265 94.7
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 5.7e-131 471.1 265 94.3
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 3.3e-123 445.3 253 94.9
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.2e-122 442.6 265 86.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.1e-121 440.3 265 84.9
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.1e-121 438.3 265 86.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 5.3e-121 438.0 265 84.9
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 5.3e-121 438.0 265 84.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 7.0e-121 437.6 265 86.4
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 85.3
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.5e-120 436.4 265 84.5
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 85.3
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.7e-119 433.0 241 96.3
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 84.2
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 86.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 6.5e-119 431.0 265 84.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 6.5e-119 431.0 265 85.3
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 6.5e-119 431.0 263 85.6
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 8.5e-119 430.6 265 84.5
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 84.5
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 83.4
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.5e-118 429.1 265 84.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.5
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 83.8
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 83.0
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 83.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 84.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 84.2
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.6e-117 426.4 259 84.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.1e-117 426.0 262 83.6
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 83.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.7e-117 424.9 265 82.6
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 4.7e-117 424.9 265 84.2
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 83.8
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 83.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 83.4
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.4e-116 423.3 263 84.8
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.8e-116 422.9 278 80.9
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 81.9
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.3e-116 422.5 265 83.0
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.3e-116 422.5 264 83.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 81.9
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 6.7e-116 421.0 274 81.8
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 8.8e-116 420.6 265 83.4
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 1.1e-115 420.2 264 82.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.3e-115 418.7 259 83.4
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.3e-115 418.7 259 83.4
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.3e-115 418.7 263 82.9
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 4.4e-115 418.3 259 83.4
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 5.7e-115 417.9 263 81.7
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 7.4e-115 417.5 263 82.1
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 9.7e-115 417.2 262 82.1
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 9.7e-115 417.2 264 81.4
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 9.7e-115 417.2 265 82.3
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 2.2e-114 416.0 258 84.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 2.2e-114 416.0 259 83.0
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.2e-114 416.0 263 82.5
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 2.8e-114 415.6 259 83.0
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 2.8e-114 415.6 262 82.1
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 2.8e-114 415.6 259 83.0
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 3.7e-114 415.2 262 81.3
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.7e-114 415.2 262 80.2
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 4.8e-114 414.8 262 82.1
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.8e-114 414.8 264 81.4
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 6.3e-114 414.5 262 81.7
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 8.2e-114 414.1 263 82.5
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 8.2e-114 414.1 262 81.3
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.1e-113 413.7 264 80.3
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.4e-113 412.5 261 79.7
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 3.1e-113 412.1 264 80.3
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 4.1e-113 411.8 255 83.9
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 5.3e-113 411.4 265 79.6
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 5.3e-113 411.4 263 81.7
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 7.0e-113 411.0 260 81.2
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 7.0e-113 411.0 260 81.2
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 7.0e-113 411.0 263 80.2
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 9.1e-113 410.6 265 80.0
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 81.3
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 5.9e-112 407.9 265 80.0
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 7.7e-112 407.5 263 80.6
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 7.7e-112 407.5 265 79.6
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 7.7e-112 407.5 258 82.9
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 80.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.8e-111 405.2 263 80.6
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.1e-110 403.7 263 82.5
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.9e-110 402.9 258 81.8
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 3.2e-110 402.1 259 80.7
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 3.2e-110 402.1 253 83.4
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 4.2e-110 401.7 262 80.5
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.2e-110 401.0 265 79.2
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.2e-109 400.2 253 84.6
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 3.6e-109 398.7 251 83.3
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 6.1e-109 397.9 253 83.8
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.2e-107 393.7 261 78.5
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.5e-107 393.3 286 74.1
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 9.7e-107 390.6 287 75.3
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.7e-106 389.8 259 78.8
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 8.3e-106 387.5 262 76.0
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 264 75.4
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 7.7e-104 380.9 259 76.4
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 4.2e-102 375.2 238 81.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 5.5e-102 374.8 225 86.2
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 9.4e-102 374.0 257 78.2
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.7e-101 371.7 225 84.9
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 6.1e-101 371.3 265 72.1
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.0e-100 370.5 265 76.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.8e-100 367.9 262 71.8
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.1e-97 358.6 262 69.8
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 7.0e-97 357.8 264 70.1
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.6e-95 351.3 257 68.9
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.2e-94 348.6 262 69.5
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 4.0e-92 342.0 265 71.3
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 6.8e-84 314.7 212 79.7
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.7e-82 310.1 252 66.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 8.6e-79 297.7 265 67.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-68 261.2 254 54.3
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.9e-66 255.4 161 81.4
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.4e-65 253.1 179 72.6
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 5.6e-62 241.9 152 84.9
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-57 227.3 154 80.5
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.4e-52 210.7 249 43.0
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.4e-51 206.1 265 49.8
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.6e-48 197.2 250 42.8
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 7.1e-41 171.8 240 42.5
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 5.3e-36 155.6 95 80.0
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.5e-32 142.9 96 77.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.0e-32 142.1 240 35.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-30 137.9 119 64.7
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-30 137.9 77 94.8
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.3e-28 129.0 75 90.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 7.1e-25 118.6 240 34.2
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 7.4e-22 108.6 101 66.3
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-10 71.6 51 74.5
Actinidia13116 Actinidia chinensis HOM05D000001 ORTHO05D009676 9.7e-06 55.1 47 57.4


User provided reference genes

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