Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 5.3e-142 507.7 255 100.0
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 9.1e-102 374.0 261 76.6
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.5e-88 330.1 262 69.1
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 2.8e-87 325.9 262 68.3
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.4e-86 323.6 262 67.2
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 1.6e-82 310.1 264 66.7
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 3.5e-69 265.8 208 66.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 3.3e-67 259.2 270 55.6
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.6e-66 256.9 263 55.5
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 2.8e-66 256.1 259 57.1
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 3.1e-65 252.7 269 55.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.0e-64 250.0 260 53.8
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 4.4e-64 248.8 204 62.7
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.3e-63 247.3 211 60.7
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 2.2e-63 246.5 223 59.6
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.7e-63 245.7 268 54.9
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.4e-62 243.0 220 58.2
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 2.4e-62 243.0 204 61.8
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 3.2e-62 242.7 223 58.3
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 3.2e-62 242.7 228 56.1
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 4.1e-62 242.3 261 53.3
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.1e-62 242.3 264 53.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 9.2e-62 241.1 223 57.0
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.2e-61 240.7 220 58.2
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 1.2e-61 240.7 260 52.3
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 1.6e-61 240.4 258 51.6
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 2.0e-61 240.0 207 59.9
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.0e-61 240.0 208 59.6
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 2.0e-61 240.0 258 54.7
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 6.0e-61 238.4 269 54.3
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.0e-60 237.7 209 60.3
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.0e-60 237.7 209 60.3
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.3e-60 237.3 268 53.7
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.7e-60 236.9 208 58.2
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 5.0e-60 235.3 203 59.6
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 5.0e-60 235.3 271 53.9
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 6.6e-60 235.0 271 53.5
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 8.6e-60 234.6 208 57.7
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 8.6e-60 234.6 255 54.1
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.5e-59 233.8 207 58.0
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.9e-59 233.4 258 51.6
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 3.3e-59 232.6 220 57.7
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 7.3e-59 231.5 222 56.8
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 9.5e-59 231.1 267 51.7
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 9.5e-59 231.1 178 64.6
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.2e-58 230.7 217 57.1
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.2e-58 230.7 264 53.4
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.6e-58 230.3 222 54.5
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.7e-58 228.8 262 51.1
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 4.7e-58 228.8 216 57.9
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 6.2e-58 228.4 217 55.3
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 6.2e-58 228.4 223 54.3
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.1e-57 227.6 239 53.1
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.4e-57 227.3 208 57.2
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.8e-57 226.9 208 57.2
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.2e-57 225.3 261 52.1
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 6.8e-57 224.9 221 55.2
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 8.9e-57 224.6 248 51.6
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.2e-56 224.2 269 51.3
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.5e-56 223.8 207 56.0
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 1.5e-56 223.8 256 52.0
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 2.6e-56 223.0 257 51.4
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 4.4e-56 222.2 272 50.0
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 4.4e-56 222.2 203 57.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 9.8e-56 221.1 261 51.0
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.3e-55 220.7 174 62.1
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.9e-55 219.5 257 49.0
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 3.7e-55 219.2 255 50.6
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.7e-55 219.2 261 50.6
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 4.9e-55 218.8 204 56.4
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 2.4e-54 216.5 207 52.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 7.1e-54 214.9 200 61.5
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 9.2e-54 214.5 258 50.0
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.6e-53 213.8 261 49.4
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.5e-53 212.6 174 60.3
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 6.0e-53 211.8 182 58.2
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 6.0e-53 211.8 215 52.6
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 7.8e-53 211.5 271 48.7
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.0e-52 211.1 262 50.4
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 2.3e-52 209.9 217 53.5
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 8.6e-52 208.0 206 58.7
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.1e-51 207.6 201 55.2
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 3.3e-51 206.1 183 59.0
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 7.3e-51 204.9 141 69.5
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.2e-50 204.1 220 50.5
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.4e-49 200.7 256 48.0
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.2e-47 193.4 148 64.2
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.6e-45 187.2 157 60.5
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.3e-44 184.1 197 53.8
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.3e-43 179.5 198 55.1
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.2e-42 177.6 157 56.7
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 5.2e-41 172.2 157 56.7
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 8.9e-41 171.4 157 56.1
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 1.3e-39 167.5 113 70.8
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.0e-33 144.8 112 62.5
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.3e-28 131.0 257 37.4
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.3e-28 130.2 175 39.4
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 2.1e-26 123.6 74 71.6
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 4.2e-14 82.8 80 47.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.6e-13 79.3 110 50.9


User provided reference genes

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