Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.7e-269 931.4 458 100.0
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.7e-205 718.8 436 84.9
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 2.4e-185 652.5 409 80.0
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 6.9e-185 651.0 409 80.0
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.5e-184 649.8 409 79.7
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 5.1e-180 634.8 408 78.9
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 2.3e-156 556.2 406 66.5
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 6.1e-149 531.6 407 64.9
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.0e-148 530.8 422 63.7
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.8e-148 530.0 392 65.1
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 3.1e-145 519.2 394 66.5
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 9.1e-145 517.7 408 62.0
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.7e-144 516.2 427 59.3
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.0e-143 514.2 402 63.4
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.4e-140 503.8 400 62.0
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.6e-139 499.6 398 62.3
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 5.7e-139 498.4 406 59.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 5.7e-139 498.4 394 61.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.7e-138 496.9 391 62.9
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.8e-138 496.1 394 61.4
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 6.3e-138 495.0 389 62.2
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 8.3e-138 494.6 391 62.1
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.1e-137 494.2 389 63.2
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.4e-137 493.8 392 61.2
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 3.1e-137 492.7 384 62.2
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 9.2e-137 491.1 397 60.5
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.2e-136 490.7 389 62.5
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.6e-136 490.3 405 59.8
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 7.8e-136 488.0 392 62.0
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.8e-136 488.0 384 61.5
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.3e-135 487.3 384 61.5
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.7e-135 486.9 387 60.5
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 4.3e-134 482.3 403 59.1
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.6e-133 480.3 396 59.1
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.1e-133 479.9 390 61.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.4e-132 477.2 382 60.5
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 1.8e-132 476.9 394 59.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.3e-132 476.5 393 59.8
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.0e-132 475.7 405 58.5
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 5.2e-132 475.3 395 59.2
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 6.8e-132 474.9 400 60.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.2e-131 474.2 376 61.4
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.2e-131 474.2 383 60.6
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.5e-131 473.8 383 60.1
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 2.0e-131 473.4 393 59.5
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 2.6e-131 473.0 377 60.2
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 4.4e-131 472.2 391 60.6
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.4e-131 472.2 390 60.0
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 7.5e-131 471.5 368 62.2
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 2.9e-130 469.5 390 60.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 6.4e-130 468.4 384 58.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.8e-129 466.8 375 60.3
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.8e-129 466.8 389 58.6
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.1e-129 465.7 375 60.3
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 7.0e-129 464.9 375 60.0
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.2e-128 464.2 375 60.0
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.2e-128 464.2 414 56.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.2e-128 464.2 388 58.8
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.6e-128 463.8 379 59.9
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 7.8e-128 461.5 391 58.6
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.0e-127 461.1 454 53.7
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.3e-127 460.7 384 59.9
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.3e-127 460.7 375 60.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 6.6e-127 458.4 410 55.4
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 8.6e-127 458.0 375 60.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 2.5e-126 456.4 394 57.4
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.6e-126 455.3 392 57.9
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 8.0e-125 451.4 384 58.3
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.1e-124 451.1 373 61.7
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 2.3e-124 449.9 448 54.2
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.6e-123 446.4 382 59.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 3.4e-123 446.0 442 52.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.1e-121 441.0 432 52.5
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.5e-118 430.6 335 62.4
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.5e-118 429.9 343 61.8
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 4.3e-118 429.1 419 53.5
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.6e-115 419.9 399 54.4
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 3.0e-111 406.4 380 52.6
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.2e-109 401.0 276 70.3
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.8e-109 399.8 444 48.9
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 8.9e-108 394.8 372 55.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.7e-106 390.6 391 51.9
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.7e-106 390.6 339 58.4
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.2e-106 390.2 343 56.6
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.6e-104 384.0 326 57.1
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.5e-102 377.5 246 72.8
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 5.6e-102 375.6 343 54.2
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.3e-98 364.4 366 54.9
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.2e-91 341.3 245 67.3
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 9.9e-91 338.2 245 65.3
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.0e-87 328.2 368 50.3
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.4e-84 317.8 317 51.4
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.3e-82 311.2 383 45.4
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.1e-76 291.6 218 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.1e-73 281.6 381 39.4
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 2.7e-72 276.9 402 42.5
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.1e-70 271.6 196 63.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 4.3e-70 269.6 354 40.7
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.3e-68 262.7 374 39.8
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 2.0e-67 260.8 376 37.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.0e-66 258.5 387 37.2
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 6.5e-66 255.8 356 43.0
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.4e-60 238.0 216 56.9
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-56 223.4 269 46.8
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.3e-54 216.9 195 57.4
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 5.0e-50 203.0 130 70.0
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.5e-49 200.7 119 73.1
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.2e-48 198.4 137 68.6
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-42 178.3 277 38.3
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 3.8e-42 176.8 178 51.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 2.0e-35 154.5 210 43.3
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.9e-33 147.9 187 43.9
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 3.6e-32 143.7 107 61.7
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 3.7e-29 133.7 133 45.9
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 4.1e-20 103.6 116 48.3
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 5.2e-15 86.7 88 50.0
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 6.8e-15 86.3 79 53.2
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.2e-14 85.5 101 45.5
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 1.1e-09 68.9 40 75.0
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.1e-07 62.4 58 56.9


User provided reference genes

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