Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 1.2e-115 419.9 207 100.0
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 4.3e-110 401.4 207 95.2
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 2.5e-89 332.4 199 83.9
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 5.5e-89 331.3 199 82.9
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 7.9e-88 327.4 200 82.5
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 1.5e-83 313.2 194 82.5
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 5.5e-65 251.5 203 66.0
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 5.3e-60 235.0 204 61.3
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 5.3e-60 235.0 203 62.1
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 8.5e-58 227.6 206 61.7
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 1.5e-57 226.9 247 53.4
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 1.6e-56 223.4 201 60.7
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 2.7e-56 222.6 202 57.4
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 2.7e-56 222.6 205 57.6
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 4.7e-56 221.9 213 54.0
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 1.4e-55 220.3 203 59.1
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 1.4e-55 220.3 204 58.3
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.8e-55 219.9 204 57.4
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 1.8e-55 219.9 203 59.1
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 2.3e-55 219.5 215 55.8
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 2.3e-55 219.5 204 57.4
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 3.0e-55 219.2 203 60.6
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 6.8e-55 218.0 206 58.3
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 3.4e-54 215.7 204 56.9
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 5.7e-54 214.9 203 57.6
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 7.5e-54 214.5 204 56.4
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 2.2e-53 213.0 203 57.1
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 6.3e-53 211.5 202 56.4
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.4e-52 210.3 204 55.9
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 1.4e-52 210.3 203 52.7
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 2.4e-52 209.5 204 55.9
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 3.1e-52 209.1 205 56.1
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 5.4e-52 208.4 215 53.0
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 9.1e-52 207.6 205 56.6
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 3.5e-51 205.7 201 55.2
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 3.5e-51 205.7 202 55.0
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 3.5e-51 205.7 203 54.7
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 5.9e-51 204.9 201 53.7
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 7.7e-51 204.5 204 55.9
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 1.0e-50 204.1 205 53.7
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 1.7e-50 203.4 202 55.4
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 2.3e-50 203.0 202 55.0
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 2.3e-50 203.0 206 55.8
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 6.5e-50 201.4 203 54.7
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 6.5e-50 201.4 202 55.0
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 1.1e-49 200.7 211 56.9
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 1.1e-49 200.7 201 52.7
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 2.5e-49 199.5 201 52.7
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 2.5e-49 199.5 202 53.0
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 2.5e-49 199.5 189 54.5
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 3.3e-49 199.1 204 52.5
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 3.3e-49 199.1 207 53.1
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 7.2e-49 198.0 230 50.4
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 9.5e-49 197.6 203 52.7
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 9.5e-49 197.6 205 53.2
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 9.5e-49 197.6 202 52.5
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 1.2e-48 197.2 203 54.7
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 1.2e-48 197.2 200 53.5
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 1.2e-48 197.2 205 53.2
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 1.6e-48 196.8 203 53.2
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 2.1e-48 196.4 201 54.7
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 2.1e-48 196.4 294 42.2
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 3.6e-48 195.7 203 53.7
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 4.7e-48 195.3 204 50.0
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 8.0e-48 194.5 196 54.1
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 8.0e-48 194.5 201 50.7
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 1.4e-47 193.7 202 51.0
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.4e-47 193.7 161 62.7
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 6.8e-47 191.4 172 57.0
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 2.0e-46 189.9 209 52.2
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 2.6e-46 189.5 203 52.2
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 5.7e-46 188.3 214 50.0
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 7.5e-46 188.0 205 53.2
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 1.3e-45 187.2 209 52.6
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 3.7e-45 185.7 209 50.7
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 2.4e-44 183.0 203 51.2
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 5.0e-42 175.3 219 47.5
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 5.0e-42 175.3 219 47.5
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 4.3e-41 172.2 207 48.8
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 7.3e-41 171.4 205 46.8
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 7.3e-41 171.4 213 45.1
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 9.5e-41 171.0 208 48.1
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 1.2e-40 170.6 190 47.9
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 2.1e-40 169.9 211 46.4
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 2.1e-40 169.9 212 48.1
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 2.8e-40 169.5 212 49.1
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 3.6e-40 169.1 205 47.3
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 8.0e-40 167.9 212 47.2
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 1.0e-39 167.5 206 47.1
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 1.4e-39 167.2 208 47.1
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 3.0e-39 166.0 210 46.2
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 3.0e-39 166.0 212 48.1
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 4.0e-39 165.6 206 47.1
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 5.2e-39 165.2 214 49.1
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 6.8e-39 164.9 208 46.2
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 6.8e-39 164.9 204 47.1
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 6.8e-39 164.9 204 47.1
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 1.5e-38 163.7 204 47.5
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 3.4e-38 162.5 204 46.6
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 3.4e-38 162.5 207 45.4
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 4.4e-38 162.2 208 46.6
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 5.8e-38 161.8 205 45.4
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 9.8e-38 161.0 211 45.0
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 7.0e-36 154.8 208 44.7
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 1.2e-35 154.1 206 46.6
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 1.2e-35 154.1 188 46.8
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 1.6e-35 153.7 144 57.6
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 7.8e-35 151.4 205 42.9
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.3e-34 150.6 125 67.2
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 2.5e-33 146.4 123 54.5
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 7.3e-33 144.8 130 61.5
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 8.9e-31 137.9 178 49.4
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 2.4e-20 103.2 96 55.2
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 6.8e-15 85.1 132 40.9
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 1.5e-14 84.0 67 62.7
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 2.9e-13 79.7 126 42.9
AagrBONN_evm.TU.Sc2ySwM_369.455 Anthoceros agrestis HOM05D006703 ORTHO05D008389 9.2e-12 74.7 168 35.1
Glyma.19G201366 Glycine max HOM05D006703 ORTHO05D008389 5.1e-10 68.9 122 37.7
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 7.3e-09 65.1 72 44.4
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 2.1e-08 63.5 38 60.5
Mapoly0024s0129 Marchantia polymorpha HOM05D006703 ORTHO05D008389 3.6e-08 62.8 212 29.7
Sc17g0001990 Simmondsia chinensis HOM05D006703 ORTHO05D008389 1.4e-07 60.8 61 49.2
Pp3c9_17430 Physcomitrium patens HOM05D006703 ORTHO05D008389 5.8e-06 55.5 124 34.7


User provided reference genes

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