Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 3.5e-137 491.5 231 100.0
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.5e-122 442.2 228 92.1
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 2.5e-119 432.2 243 82.3
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 6.3e-118 427.6 271 75.6
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 5.3e-117 424.5 239 82.4
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 5.5e-114 414.5 239 81.6
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 8.2e-110 400.6 239 79.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 6.1e-81 304.7 216 64.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.0e-80 302.4 216 64.8
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 4.4e-79 298.5 227 61.7
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 6.3e-78 294.7 226 59.7
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.8e-77 293.1 222 61.7
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 3.1e-77 292.4 233 62.2
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 2.9e-75 285.8 222 60.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 2.9e-75 285.8 226 59.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 6.6e-75 284.6 212 61.3
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 8.6e-75 284.3 226 61.1
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 8.6e-75 284.3 226 61.1
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 8.6e-75 284.3 210 61.0
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 7.3e-74 281.2 211 61.6
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 7.3e-74 281.2 218 59.6
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 9.5e-74 280.8 218 59.6
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 4.7e-73 278.5 224 58.5
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.0e-72 277.3 229 58.1
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.4e-72 276.9 213 60.6
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.4e-72 276.9 209 61.2
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.8e-72 276.6 218 58.3
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 3.0e-72 275.8 211 59.7
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.0e-72 275.8 223 57.0
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.6e-71 272.7 221 60.6
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.6e-71 272.7 224 56.2
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.4e-71 272.3 221 60.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 4.4e-71 271.9 216 60.6
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 9.8e-71 270.8 206 60.7
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 9.8e-71 270.8 195 62.6
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 2.9e-70 269.2 212 58.5
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 2.9e-70 269.2 224 56.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 3.7e-70 268.9 216 57.9
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 6.4e-70 268.1 181 63.0
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.4e-69 266.9 219 57.1
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.9e-69 266.5 213 58.7
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 3.2e-69 265.8 214 57.9
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 3.2e-69 265.8 212 59.9
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 3.2e-69 265.8 227 52.9
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 3.2e-69 265.8 178 67.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 5.4e-69 265.0 212 59.0
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 7.0e-69 264.6 217 56.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 9.2e-69 264.2 217 57.6
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.2e-68 263.8 224 57.6
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.2e-68 263.8 206 62.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.6e-68 263.5 212 59.4
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 2.7e-68 262.7 162 71.6
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 3.5e-68 262.3 214 58.4
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.6e-68 261.9 178 68.0
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 7.8e-68 261.2 188 66.0
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 7.8e-68 261.2 190 62.6
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.7e-67 260.0 215 60.0
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.7e-67 260.0 225 55.6
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 1.9e-66 256.5 227 54.2
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 3.3e-66 255.8 196 60.2
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 9.5e-66 254.2 219 56.2
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.1e-65 253.1 223 57.4
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 2.8e-65 252.7 234 50.0
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.8e-65 252.7 212 56.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 6.2e-65 251.5 189 62.4
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 2.3e-64 249.6 228 53.9
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 3.1e-64 249.2 200 59.5
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.0e-63 246.5 214 53.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 2.6e-63 246.1 191 58.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.4e-63 245.7 216 57.4
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 3.4e-63 245.7 229 55.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 7.5e-63 244.6 216 57.4
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 7.5e-63 244.6 217 56.7
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 9.8e-63 244.2 250 52.4
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.3e-62 243.8 240 52.9
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.7e-62 243.4 214 56.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.7e-62 243.4 214 56.5
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.7e-62 243.4 234 48.7
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 4.9e-62 241.9 234 48.3
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 6.4e-62 241.5 232 53.9
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 8.3e-62 241.1 194 61.3
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.4e-61 240.4 219 54.8
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.4e-61 240.4 205 57.6
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.9e-61 240.0 228 53.5
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.9e-61 240.0 190 61.1
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.2e-61 239.2 186 63.4
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.2e-61 239.2 186 63.4
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 9.2e-61 237.7 207 56.0
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.1e-60 236.5 216 56.9
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 2.7e-60 236.1 169 63.9
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.0e-60 235.0 177 60.5
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 7.8e-60 234.6 242 50.4
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.0e-59 234.2 177 61.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 8.6e-59 231.1 237 48.1
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 5.6e-58 228.4 214 55.6
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 2.3e-56 223.0 195 52.3
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 5.2e-56 221.9 164 63.4
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 5.2e-56 221.9 164 63.4
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.6e-55 219.5 163 63.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.4e-55 219.2 163 63.2
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.4e-55 219.2 163 63.2
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 5.8e-55 218.4 163 62.6
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.7e-54 216.9 155 64.5
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.2e-53 212.6 174 55.2
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 5.4e-53 211.8 172 58.7
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.6e-52 210.3 168 62.5
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.5e-52 209.1 227 48.5
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 6.6e-51 204.9 185 56.8
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-50 204.1 185 56.8
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 4.3e-50 202.2 151 61.6
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.8e-49 199.5 103 79.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 2.3e-43 179.9 134 57.5
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.4e-37 160.6 226 42.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 3.1e-32 142.9 84 67.9
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 4.0e-32 142.5 84 66.7
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.0e-31 140.2 136 49.3
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.9e-30 135.6 83 66.3
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 3.2e-29 132.9 103 50.5
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 9.0e-24 114.8 61 73.8
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 6.5e-14 82.0 145 40.0
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 3.9e-11 72.8 105 41.9


User provided reference genes

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