Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 8.5e-174 613.6 318 100.0
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 6.5e-158 560.8 318 91.5
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 3.2e-128 462.2 300 79.7
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 2.9e-113 412.5 322 68.9
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 3.8e-113 412.1 320 68.8
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 4.6e-111 405.2 318 69.5
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 1.9e-101 373.2 321 64.5
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 9.6e-101 370.9 321 64.8
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 9.6e-101 370.9 321 64.8
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 6.9e-99 364.8 321 64.2
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 2.0e-98 363.2 296 67.6
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 7.6e-98 361.3 296 67.6
Solyc02g021450.2 Solanum lycopersicum HOM05D006030 ORTHO05D007475 1.7e-97 360.1 296 66.9
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 9.3e-88 327.8 323 55.7
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 1.5e-82 310.5 321 55.8
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 5.8e-82 308.5 320 53.8
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 8.7e-78 294.7 320 52.8
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 1.5e-77 293.9 322 51.2
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 1.6e-76 290.4 329 53.5
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 3.7e-76 289.3 320 50.9
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 6.3e-76 288.5 320 50.9
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 5.3e-75 285.4 332 53.9
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 1.0e-73 281.2 321 51.7
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 9.4e-72 274.6 340 50.9
SalBow8G3821 Salvia bowleyana HOM05D006030 ORTHO05D007475 1.6e-71 273.9 299 53.5
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 1.0e-70 271.2 321 50.2
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 1.0e-70 271.2 307 53.1
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 1.4e-70 270.8 302 52.0
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 1.8e-70 270.4 298 50.3
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 3.0e-70 269.6 299 50.8
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 6.7e-70 268.5 337 49.6
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 6.7e-70 268.5 337 49.6
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 1.5e-69 267.3 300 50.7
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 2.0e-69 266.9 310 50.3
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 2.5e-69 266.5 299 50.8
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 1.3e-68 264.2 282 52.8
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 6.3e-68 261.9 302 49.3
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 4.1e-67 259.2 305 48.9
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 4.1e-67 259.2 307 48.9
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 5.3e-67 258.8 325 48.6
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 1.5e-66 257.3 298 50.3
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 1.5e-66 257.3 298 50.3
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 4.5e-66 255.8 323 46.4
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 7.7e-66 255.0 299 48.5
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 2.2e-65 253.4 304 49.7
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 8.5e-65 251.5 322 46.3
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 3.2e-64 249.6 274 51.1
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 4.2e-64 249.2 318 47.8
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 1.6e-63 247.3 318 47.8
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 1.6e-63 247.3 283 47.3
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 3.6e-63 246.1 318 47.5
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 1.0e-62 244.6 298 48.7
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.4e-62 244.2 316 47.5
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 1.4e-62 244.2 302 46.0
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 1.1e-61 241.1 296 47.3
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 1.5e-61 240.7 319 47.6
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 1.5e-61 240.7 283 47.3
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 4.4e-61 239.2 317 47.0
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 7.4e-61 238.4 314 46.8
Lsat_1_v5_gn_1_116040 Lactuca sativa HOM05D006030 ORTHO05D007475 2.2e-60 236.9 292 49.0
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 4.8e-60 235.7 298 46.0
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 3.1e-59 233.0 284 45.8
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 4.1e-59 232.6 300 47.0
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 2.0e-58 230.3 326 43.6
Lj6g0008094 Lotus japonicus HOM05D006030 ORTHO05D007475 5.9e-58 228.8 301 43.9
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 7.7e-58 228.4 287 45.3
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 2.9e-57 226.5 294 46.6
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 6.5e-57 225.3 334 46.7
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 6.5e-57 225.3 269 51.7
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 1.4e-56 224.2 287 45.6
AUR62030127 Chenopodium quinoa HOM05D006030 ORTHO05D007475 7.2e-56 221.9 302 44.0
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 7.2e-56 221.9 304 44.7
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 9.4e-56 221.5 285 45.3
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 9.4e-56 221.5 295 45.8
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 1.6e-55 220.7 315 41.9
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 1.6e-55 220.7 304 46.1
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 4.7e-55 219.2 298 45.6
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 4.7e-55 219.2 303 43.2
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 6.1e-55 218.8 299 45.2
Lsat_1_v5_gn_7_32280 Lactuca sativa HOM05D006030 ORTHO05D007475 1.8e-54 217.2 293 46.8
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 3.0e-54 216.5 302 44.0
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 3.9e-54 216.1 314 42.4
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 3.9e-54 216.1 309 40.5
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 3.9e-54 216.1 242 52.1
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 3.9e-54 216.1 308 42.9
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 3.9e-54 216.1 280 43.6
AUR62002659 Chenopodium quinoa HOM05D006030 ORTHO05D007475 5.2e-54 215.7 293 45.4
MELO3C002779.2 Cucumis melo HOM05D006030 ORTHO05D007475 6.7e-54 215.3 320 41.2
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 1.5e-53 214.2 283 47.3
Nn4g26650 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.5e-53 214.2 281 43.8
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 1.5e-53 214.2 311 41.5
ClCG03G006430 Citrullus lanatus HOM05D006030 ORTHO05D007475 5.7e-53 212.2 295 42.4
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 7.4e-53 211.8 312 41.0
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 9.7e-53 211.5 296 41.6
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 9.7e-53 211.5 256 48.0
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 1.3e-52 211.1 314 40.8
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 2.8e-52 209.9 256 50.4
EL10Ac8g19610 Beta vulgaris HOM05D006030 ORTHO05D007475 4.8e-52 209.1 298 41.6
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 8.2e-52 208.4 313 40.3
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 8.2e-52 208.4 313 40.9
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 1.1e-51 208.0 309 41.7
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 1.1e-51 208.0 312 40.4
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 2.6e-50 203.4 312 40.1
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 2.6e-50 203.4 312 40.1
Hund21555 Selenicereus undatus HOM05D006030 ORTHO05D007475 4.5e-50 202.6 304 41.1
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 7.7e-50 201.8 301 41.9
PSO541G2932 Papaver somniferum HOM05D006030 ORTHO05D007475 3.8e-49 199.5 303 44.2
Peaxi162Scf00333g00214 Petunia axillaris HOM05D006030 ORTHO05D007475 5.0e-49 199.1 118 83.9
Sed0007526 Sechium edule HOM05D006030 ORTHO05D007475 8.5e-49 198.4 285 41.4
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 1.5e-48 197.6 281 39.5
Sed0012497 Sechium edule HOM05D006030 ORTHO05D007475 5.5e-48 195.7 320 40.0
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 9.4e-48 194.9 301 40.5
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.4e-46 191.0 258 41.9
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 1.4e-46 191.0 258 41.9
PSO675G3639 Papaver somniferum HOM05D006030 ORTHO05D007475 5.2e-46 189.1 306 42.2
Ah.09g232450 Amaranthus hybridus HOM05D006030 ORTHO05D007475 4.5e-42 176.0 281 38.1
GSVIVG01021577001 Vitis vinifera HOM05D006030 ORTHO05D007475 3.2e-40 169.9 201 49.3
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 9.4e-40 168.3 243 40.3
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea HOM05D006030 ORTHO05D007475 2.7e-39 166.8 281 37.4
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea HOM05D006030 ORTHO05D007475 3.6e-39 166.4 281 37.4
Migut.M01870 Erythranthe guttata HOM05D006030 ORTHO05D007475 1.2e-34 151.4 131 61.8
unitig_37.g12083 Utricularia gibba HOM05D006030 ORTHO05D007475 5.4e-27 125.9 174 46.6
ATR0626G038 Amborella trichopoda HOM05D006030 ORTHO05D007475 1.1e-24 118.2 265 33.2
Cpa.g.sc17.66 Carica papaya HOM05D006030 ORTHO05D007475 1.5e-24 117.9 154 42.9
HPP92_019506 Vanilla planifolia HOM05D006030 ORTHO05D007475 6.8e-22 109.0 256 32.0
SEGI_26103 Sequoiadendron giganteum HOM05D006030 ORTHO05D007475 3.6e-15 86.7 177 33.9
SGA_v2.0_scaffold106G30660 Striga asiatica HOM05D006030 ORTHO05D007475 6.6e-09 65.9 85 43.5
Duzib248G1648 Durio zibethinus HOM05D006030 ORTHO05D007475 1.6e-07 61.2 101 38.6
Nn1g09396 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.4e-06 58.2 163 28.8
Actinidia26538 Actinidia chinensis HOM05D006030 ORTHO05D007475 1.8e-06 57.8 97 40.2


User provided reference genes

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