Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.4e-198 695.3 341 100.0
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 8.9e-129 464.2 235 95.7
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 4.0e-113 412.1 236 86.0
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.9e-113 411.4 242 83.5
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 3.4e-112 409.1 240 84.6
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 1.3e-111 407.1 242 83.5
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 4.9e-111 405.2 240 83.3
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 2.4e-97 359.8 336 58.0
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 4.5e-96 355.5 241 73.0
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 7.6e-96 354.8 260 68.1
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.7e-95 353.6 237 73.8
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.9e-95 352.8 238 73.5
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.2e-93 347.4 234 71.8
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 1.2e-93 347.4 258 66.7
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 1.6e-93 347.1 242 69.0
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 2.1e-93 346.7 237 71.7
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 4.6e-93 345.5 253 69.2
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 4.6e-93 345.5 253 68.4
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 6.0e-93 345.1 253 68.8
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 2.3e-92 343.2 240 67.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 3.9e-92 342.4 254 66.1
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 5.1e-92 342.0 234 70.9
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 6.7e-92 341.7 261 65.1
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 6.7e-92 341.7 260 67.7
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 1.5e-91 340.5 240 67.5
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 1.5e-91 340.5 231 72.7
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 4.3e-91 339.0 259 66.4
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 7.4e-91 338.2 259 62.9
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 2.8e-90 336.3 269 64.3
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 3.7e-90 335.9 246 69.9
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 6.3e-90 335.1 234 67.9
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 6.3e-90 335.1 252 67.1
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.1e-89 334.3 263 64.3
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.4e-89 334.0 237 69.6
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 1.8e-89 333.6 235 68.9
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 1.5e-88 330.5 235 68.5
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 1.5e-88 330.5 234 67.5
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 1.5e-88 330.5 236 69.5
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 1.5e-88 330.5 234 70.1
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 2.6e-88 329.7 237 69.2
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 3.4e-88 329.3 261 63.2
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 3.4e-88 329.3 236 67.8
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.0e-87 327.8 234 67.5
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 1.7e-87 327.0 240 65.8
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 2.2e-87 326.6 275 62.5
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 3.8e-87 325.9 234 66.7
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 6.5e-87 325.1 234 66.7
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 1.1e-86 324.3 234 66.2
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 1.1e-86 324.3 236 68.6
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 1.9e-86 323.6 234 68.8
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 2.5e-86 323.2 234 68.8
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 3.2e-86 322.8 237 69.6
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 4.2e-86 322.4 253 64.4
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 4.2e-86 322.4 240 65.4
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 5.5e-86 322.0 234 66.7
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 7.2e-86 321.6 240 66.7
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 2.1e-85 320.1 234 65.4
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.7e-85 319.7 263 62.4
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 2.7e-85 319.7 240 64.2
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 2.7e-85 319.7 240 64.6
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.3e-84 317.4 234 69.2
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 1.8e-84 317.0 234 68.8
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 5.1e-84 315.5 234 69.2
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 8.7e-84 314.7 234 69.2
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 8.7e-84 314.7 234 68.8
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.5e-83 313.9 229 68.1
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 3.3e-83 312.8 234 69.2
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 5.7e-83 312.0 234 64.5
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 7.4e-83 311.6 256 62.9
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 2.2e-82 310.1 248 64.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 2.8e-82 309.7 260 58.1
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 3.7e-82 309.3 241 64.3
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.4e-81 307.4 285 58.2
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 1.8e-81 307.0 249 61.4
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 1.8e-81 307.0 235 66.4
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 5.3e-81 305.4 264 60.6
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 1.2e-80 304.3 267 58.8
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 2.2e-79 300.1 239 63.2
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 5.0e-79 298.9 237 63.3
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 6.5e-79 298.5 246 61.8
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 8.5e-79 298.1 244 63.9
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 8.5e-79 298.1 191 71.2
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 2.7e-77 293.1 246 61.0
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 1.4e-76 290.8 235 63.4
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.4e-72 276.2 185 70.8
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 1.7e-71 273.9 247 56.7
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 1.1e-70 271.2 254 55.9
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 4.2e-70 269.2 241 58.5
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 9.4e-70 268.1 234 58.5
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 9.4e-70 268.1 244 57.4
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 1.8e-68 263.8 250 57.6
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 3.9e-68 262.7 190 68.9
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 6.7e-68 261.9 230 57.8
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 8.2e-66 255.0 177 73.4
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 5.3e-65 252.3 176 72.2
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 9.1e-65 251.5 240 55.0
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 7.7e-64 248.4 244 55.7
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 2.9e-63 246.5 238 55.9
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.1e-62 244.6 234 58.5
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 1.6e-61 240.7 171 67.3
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 2.1e-61 240.4 174 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 8.0e-61 238.4 207 57.5
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 4.4e-59 232.6 240 54.6
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.3e-58 231.1 238 49.2
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 4.8e-58 229.2 150 68.0
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 1.1e-57 228.0 236 52.1
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 1.9e-54 217.2 141 74.5
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 8.8e-52 208.4 129 75.2
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 4.4e-51 206.1 135 73.3
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 4.8e-50 202.6 241 48.1
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 5.2e-44 182.6 106 79.2
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 4.4e-43 179.5 143 65.0
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 1.7e-39 167.5 225 42.7
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 4.0e-36 156.4 99 72.7
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 2.2e-34 150.6 221 38.5
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.8e-33 147.5 238 39.9
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 3.9e-31 139.8 241 35.7
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.9e-30 137.5 147 47.6
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 4.7e-29 132.9 189 42.3
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.8e-28 131.0 170 45.3
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.8e-28 129.0 66 89.4
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 8.9e-28 128.6 393 27.5
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 1.7e-23 114.4 166 41.0
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 2.5e-22 110.5 61 78.7
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.1e-20 103.6 66 71.2
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 1.6e-16 91.3 53 77.4
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 6.0e-16 89.4 56 67.9
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.5e-14 84.7 51 72.5
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.5e-11 74.7 46 67.4
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.0e-08 62.8 36 72.2
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 7.8e-08 62.4 31 87.1
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.1e-06 58.5 31 83.9
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 7.3e-06 55.8 42 59.5


User provided reference genes

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