Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 4.7e-149 531.2 271 100.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.1e-92 342.4 310 64.8
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 9.4e-89 330.9 309 62.1
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 3.9e-87 325.5 309 62.1
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 4.4e-86 322.0 315 59.4
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 9.7e-86 320.9 315 59.4
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 5.5e-65 251.9 284 49.6
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 4.1e-60 235.7 316 45.9
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 6.6e-58 228.4 312 44.2
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 6.6e-58 228.4 312 44.2
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 3.3e-57 226.1 311 45.7
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 4.7e-56 222.2 310 42.9
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 5.2e-55 218.8 303 44.2
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 6.8e-55 218.4 296 43.6
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 8.9e-55 218.0 312 42.3
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 1.2e-54 217.6 306 42.2
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 2.0e-54 216.9 291 43.3
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 2.6e-54 216.5 307 44.6
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 2.2e-53 213.4 308 42.9
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 4.9e-53 212.2 288 43.8
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 2.7e-51 206.5 309 40.5
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 7.8e-51 204.9 310 40.0
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.5e-49 200.7 296 41.2
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.5e-49 200.7 296 41.2
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.3e-49 199.5 296 40.9
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 4.7e-48 195.7 305 41.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 6.8e-47 191.8 319 38.2
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.5e-46 190.7 314 40.1
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 1.4e-44 184.1 316 36.1
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.4e-44 184.1 267 39.7
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 3.2e-44 183.0 333 36.0
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 9.2e-44 181.4 306 37.9
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 3.5e-43 179.5 302 36.8
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 3.5e-43 179.5 320 35.6
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 6.0e-43 178.7 323 35.9
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 6.6e-42 175.3 307 35.2
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 8.6e-42 174.9 309 37.2
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.1e-41 174.5 297 36.4
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 1.1e-41 174.5 314 35.0
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.5e-41 174.1 301 35.9
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.9e-41 173.7 300 34.3
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.3e-41 172.9 298 35.2
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.3e-41 172.9 321 36.4
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 5.6e-41 172.2 289 38.4
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 7.3e-41 171.8 311 34.4
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 9.5e-41 171.4 319 34.8
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.2e-40 171.0 318 34.3
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.1e-40 170.2 310 35.2
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 3.6e-40 169.5 303 35.0
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 3.6e-40 169.5 317 36.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 6.2e-40 168.7 288 36.8
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 6.2e-40 168.7 307 35.2
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.1e-39 167.9 289 37.0
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.4e-39 167.5 312 34.6
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.4e-39 167.5 323 34.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 2.3e-39 166.8 301 34.6
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 5.2e-39 165.6 313 35.5
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 6.8e-39 165.2 311 33.8
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 6.8e-39 165.2 317 34.4
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 8.9e-39 164.9 311 33.8
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 8.9e-39 164.9 323 36.2
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 1.2e-38 164.5 291 36.8
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 1.2e-38 164.5 291 36.8
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 1.2e-38 164.5 291 36.8
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 2.0e-38 163.7 268 39.9
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.0e-38 163.7 307 35.8
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 2.6e-38 163.3 318 35.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 5.8e-38 162.2 312 35.3
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 9.8e-38 161.4 305 34.4
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 1.3e-37 161.0 314 35.0
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.7e-37 160.6 304 34.2
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 2.2e-37 160.2 322 34.5
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 2.9e-37 159.8 316 36.1
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 5.4e-36 155.6 161 50.3
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 7.0e-36 155.2 302 35.4
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.7e-35 153.3 306 33.7
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 3.5e-35 152.9 322 33.9
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 6.0e-35 152.1 325 33.2
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-34 151.0 306 33.7
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.3e-34 151.0 314 33.1
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 1.3e-34 151.0 301 35.2
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 1.7e-34 150.6 145 55.9
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.3e-34 150.2 309 33.0
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 3.0e-34 149.8 311 33.4
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.1e-34 149.1 311 33.4
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.6e-33 145.6 232 40.5
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.3e-33 145.2 311 32.8
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 7.3e-33 145.2 71 97.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.6e-32 144.1 265 38.5
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 6.2e-32 142.1 297 30.6
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.0e-31 139.4 259 35.5
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 6.8e-31 138.7 171 46.2
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 1.5e-30 137.5 152 53.3
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.2e-24 117.9 332 27.1
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 3.4e-22 109.8 103 56.3
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 5.8e-22 109.0 98 62.2
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 4.2e-20 102.8 173 37.6
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 1.3e-18 97.8 209 30.1
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 7.3e-17 92.0 115 53.0
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 2.8e-16 90.1 194 30.4
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 3.6e-16 89.7 329 27.4
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 6.2e-16 89.0 132 38.6
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 1.1e-15 88.2 79 53.2
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 2.6e-14 83.6 241 28.6
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.0e-10 71.6 242 28.1
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 1.4e-07 61.2 155 33.5
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.4e-07 61.2 288 24.3
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 1.2e-06 58.2 251 26.3
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 9.9e-06 55.1 57 43.9


User provided reference genes

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