Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.6e-104 382.1 200 100.0
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.9e-95 352.1 203 91.1
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 8.2e-90 334.0 202 87.1
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 9.3e-86 320.5 204 84.3
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 2.1e-85 319.3 203 83.3
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 6.1e-85 317.8 204 83.8
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 1.9e-78 296.2 189 79.4
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.7e-77 292.4 189 78.8
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 5.1e-76 288.1 206 73.8
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.4e-73 279.3 193 73.6
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 2.4e-73 279.3 208 70.7
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 4.1e-73 278.5 203 77.8
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 4.1e-73 278.5 203 70.4
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 5.3e-73 278.1 203 75.4
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.6e-72 275.8 204 70.1
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.3e-71 273.5 203 70.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 8.5e-71 270.8 193 70.5
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 2.5e-70 269.2 194 72.2
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 2.5e-70 269.2 204 70.6
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.2e-70 268.9 203 70.4
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 3.2e-70 268.9 197 72.6
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 4.2e-70 268.5 191 73.8
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.2e-70 268.5 204 70.1
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 7.2e-70 267.7 192 72.9
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 9.4e-70 267.3 202 70.3
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 9.4e-70 267.3 205 71.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 9.4e-70 267.3 190 73.2
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 2.1e-69 266.2 202 71.3
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 2.1e-69 266.2 190 72.6
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 4.7e-69 265.0 190 72.1
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 7.9e-69 264.2 190 71.6
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 6.7e-68 261.2 202 68.3
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.7e-68 261.2 202 68.3
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 1.1e-67 260.4 202 68.3
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.5e-67 260.0 202 67.8
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.6e-67 259.2 204 67.6
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 2.6e-67 259.2 206 67.0
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 3.3e-67 258.8 194 70.6
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 4.4e-67 258.5 193 69.4
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 7.4e-67 257.7 205 66.8
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.4e-67 257.7 202 66.8
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.4e-67 257.7 202 66.8
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 9.7e-67 257.3 206 65.5
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 1.3e-66 256.9 209 67.0
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.7e-66 256.5 205 66.8
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.7e-66 256.5 197 70.1
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.7e-66 256.5 197 69.0
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 2.8e-66 255.8 204 68.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 2.8e-66 255.8 194 69.6
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 2.8e-66 255.8 205 66.3
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 6.3e-66 254.6 202 66.3
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 8.2e-66 254.2 190 69.5
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 8.2e-66 254.2 203 67.0
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-65 253.8 205 65.9
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.1e-65 253.8 193 68.4
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.4e-65 253.4 206 66.0
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.8e-65 253.1 194 68.6
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 1.8e-65 253.1 202 66.8
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 1.8e-65 253.1 194 68.6
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 2.4e-65 252.7 205 65.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 3.1e-65 252.3 195 68.7
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 3.1e-65 252.3 193 69.4
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 4.1e-65 251.9 194 68.0
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 5.3e-65 251.5 205 65.4
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 7.0e-65 251.1 205 65.4
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 7.0e-65 251.1 212 66.5
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 7.0e-65 251.1 205 66.8
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 1.2e-64 250.4 205 65.9
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 1.2e-64 250.4 194 67.5
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.6e-64 250.0 190 68.4
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.6e-64 250.0 204 66.2
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 2.6e-64 249.2 205 65.4
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 2.6e-64 249.2 190 68.9
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 4.5e-64 248.4 193 68.4
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 4.5e-64 248.4 207 65.2
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 7.7e-64 247.7 191 68.1
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 7.7e-64 247.7 194 67.5
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.0e-63 247.3 213 64.3
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.3e-63 246.9 202 65.3
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 2.9e-63 245.7 205 64.4
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.1e-62 243.8 198 66.7
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.1e-62 243.8 201 64.2
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.9e-62 243.0 209 64.1
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 2.5e-62 242.7 210 61.9
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 4.2e-62 241.9 196 63.8
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 1.2e-61 240.4 199 64.8
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.1e-61 239.6 177 71.8
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 2.7e-61 239.2 205 63.9
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 3.6e-61 238.8 199 63.3
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 8.8e-60 234.2 201 59.2
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 8.2e-58 227.6 201 62.7
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 2.2e-55 219.5 193 63.2
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.4e-52 210.3 187 63.6
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 4.4e-51 205.3 186 64.0
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 8.3e-50 201.1 196 55.6
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.6e-48 196.8 143 71.3
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 7.7e-48 194.5 149 70.5
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 2.5e-46 189.5 202 53.5
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.2e-45 187.2 155 65.8
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.8e-44 181.4 200 53.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 5.9e-40 168.3 169 58.6
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.3e-39 166.4 206 45.6
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 4.6e-32 142.1 126 59.5
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 9.2e-25 117.9 100 62.0
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 2.3e-23 113.2 154 48.1
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-22 110.9 86 65.1
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 4.6e-16 89.0 66 63.6
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 6.0e-16 88.6 139 40.3
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.0e-15 87.8 81 59.3
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.7e-15 87.0 66 62.1
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.7e-15 87.0 70 62.9
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.7e-15 87.0 70 62.9
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.7e-15 87.0 70 62.9
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.6e-15 84.7 70 61.4
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.6e-15 84.7 70 61.4
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.1e-14 84.3 70 61.4
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.5e-14 84.0 70 61.4
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 1.6e-13 80.5 59 71.2
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 2.8e-13 79.7 47 78.7
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 2.4e-09 66.6 110 45.5
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 1.6e-08 63.9 41 73.2
Nitab4.5_0006622g0070 Nicotiana tabacum HOM05D006363 ORTHO05D007920 6.6e-07 58.5 33 90.9


User provided reference genes

Program Settings