Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000713g0180 Nicotiana tabacum HOM05D005623 ORTHO05D007130 2.0e-91 339.0 161 100.0
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 5.6e-81 304.3 164 90.9
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 4.1e-76 288.1 150 90.7
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 9.2e-76 287.0 150 90.7
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 1.3e-74 283.1 161 84.5
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 3.2e-68 261.9 150 80.7
Oeu000326.2 Olea europaea HOM05D005623 ORTHO05D007130 1.6e-67 259.6 150 77.3
Lj4A313G20 Lonicera japonica HOM05D005623 ORTHO05D007130 9.6e-65 250.4 159 73.0
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 2.8e-64 248.8 156 73.1
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 1.4e-63 246.5 139 80.6
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 9.0e-63 243.8 159 71.1
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 1.2e-62 243.4 149 77.9
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 2.6e-62 242.3 145 77.2
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 3.4e-62 241.9 142 79.6
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 3.4e-62 241.9 158 73.4
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 9.9e-62 240.4 151 73.5
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 3.8e-61 238.4 148 76.4
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 8.4e-61 237.3 139 80.6
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 5.4e-60 234.6 140 80.0
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 7.1e-60 234.2 141 74.5
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 1.6e-59 233.0 141 77.3
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 1.6e-59 233.0 140 75.7
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.1e-59 232.6 141 74.5
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.7e-59 232.3 141 73.0
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 3.5e-59 231.9 140 76.4
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 4.6e-59 231.5 139 79.1
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 6.0e-59 231.1 141 75.9
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 6.0e-59 231.1 140 75.0
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 7.8e-59 230.7 140 76.4
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 1.0e-58 230.3 147 72.8
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 1.3e-58 229.9 148 73.0
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 1.7e-58 229.6 141 73.8
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 1.7e-58 229.6 141 73.8
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 1.7e-58 229.6 137 79.6
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 1.7e-58 229.6 152 73.0
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 2.3e-58 229.2 147 72.8
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 2.3e-58 229.2 145 73.1
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 3.0e-58 228.8 143 75.5
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 3.0e-58 228.8 139 75.5
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 3.0e-58 228.8 149 72.5
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 5.1e-58 228.0 140 75.0
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 5.1e-58 228.0 141 73.8
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 8.7e-58 227.3 141 74.5
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 1.1e-57 226.9 144 74.3
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 1.9e-57 226.1 140 74.3
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 1.9e-57 226.1 147 72.1
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.5e-57 225.7 141 72.3
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 3.3e-57 225.3 141 73.8
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 5.6e-57 224.6 152 70.4
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 5.6e-57 224.6 152 70.4
Psat7g019640 Pisum sativum HOM05D005623 ORTHO05D007130 5.6e-57 224.6 158 67.1
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 7.3e-57 224.2 139 75.5
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 2.8e-56 222.2 146 72.6
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 3.6e-56 221.9 139 73.4
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 6.2e-56 221.1 139 75.5
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 6.2e-56 221.1 140 73.6
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 6.2e-56 221.1 140 74.3
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 6.2e-56 221.1 152 69.1
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 6.2e-56 221.1 137 75.2
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 8.1e-56 220.7 139 74.8
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 8.1e-56 220.7 135 76.3
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 8.1e-56 220.7 140 72.1
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 8.1e-56 220.7 149 72.5
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 1.1e-55 220.3 141 75.2
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.4e-55 219.9 140 75.0
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 1.4e-55 219.9 136 75.7
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 1.4e-55 219.9 148 70.9
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 2.4e-55 219.2 147 70.7
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 2.4e-55 219.2 147 72.1
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 4.0e-55 218.4 136 74.3
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 6.9e-55 217.6 147 71.4
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 9.0e-55 217.2 147 72.1
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 2.0e-54 216.1 140 72.1
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 2.6e-54 215.7 139 73.4
BcaC09g51738 Brassica carinata HOM05D000639 ORTHO05D003485 2.6e-54 215.7 136 73.5
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 3.4e-54 215.3 147 70.7
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 5.8e-54 214.5 136 73.5
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 5.8e-54 214.5 137 74.5
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 5.8e-54 214.5 137 74.5
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 5.8e-54 214.5 136 72.8
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 1.3e-53 213.4 144 70.8
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 3.8e-53 211.8 161 66.5
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 6.4e-53 211.1 137 71.5
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 8.4e-53 210.7 136 72.8
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 8.4e-53 210.7 136 72.8
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 1.1e-52 210.3 136 72.8
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 1.1e-52 210.3 136 72.8
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 1.1e-52 210.3 136 72.8
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 4.2e-52 208.4 124 77.4
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 5.4e-52 208.0 136 68.4
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.2e-51 206.8 141 67.4
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 1.0e-50 203.8 136 68.4
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 3.9e-50 201.8 133 72.9
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 7.4e-49 197.6 140 69.3
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 3.7e-48 195.3 136 65.4
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 4.8e-48 194.9 141 63.8
Glyma.08G029900 Glycine max HOM05D005623 ORTHO05D007130 6.2e-48 194.5 133 71.4
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 5.3e-47 191.4 144 67.4
Nn1g05570 Nelumbo nucifera HOM05D005623 ORTHO05D007130 5.3e-47 191.4 140 62.9
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 9.9e-46 187.2 137 64.2
CBR_g19775 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-44 181.4 137 62.0
Hund25842 Selenicereus undatus HOM05D005623 ORTHO05D007130 3.3e-41 172.2 111 71.2
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 2.1e-35 152.9 138 51.4
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 7.9e-35 151.0 136 53.7
CDE06G0203 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 3.9e-26 122.1 81 67.9
MCO08G350 Micromonas commoda HOM05D005623 ORTHO05D007130 7.7e-22 107.8 119 47.1
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 8.5e-21 104.4 58 82.8
PSO782G3778 Papaver somniferum HOM05D005623 ORTHO05D007130 7.2e-20 101.3 63 76.2
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 2.7e-19 99.4 143 37.8
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 4.7e-19 98.6 61 73.8
PSO210G0842 Papaver somniferum HOM05D005623 ORTHO05D007130 3.9e-18 95.5 58 75.9
Hma1.2p1_0663F.1_g198810 Hydrangea macrophylla HOM05D005623 ORTHO05D007130 9.7e-17 90.9 64 60.9
CDE06G1237 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 6.9e-15 84.7 43 83.7
MD02G1074100 Malus domestica HOM05D005623 ORTHO05D007130 3.9e-10 68.9 50 66.0
Cre02.g083065 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 5.2e-10 68.6 107 39.3
MD02G1074200 Malus domestica HOM05D005623 ORTHO05D007130 8.2e-08 61.2 41 65.9
Ca_28747_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 1.6e-06 57.0 109 33.0
Cc02_g35260 Coffea canephora HOM05D002683 ORTHO05D007757 3.5e-06 55.8 142 26.1


User provided reference genes

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