Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000713g0170 Nicotiana tabacum HOM05D005623 ORTHO05D007130 2.1e-91 339.0 168 100.0
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 7.9e-86 320.5 165 96.4
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 4.3e-76 288.1 166 85.5
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 7.4e-76 287.3 166 84.9
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 6.2e-75 284.3 165 83.6
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 3.9e-69 265.0 166 74.7
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 1.1e-68 263.5 164 75.0
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 1.9e-68 262.7 166 74.1
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 2.5e-68 262.3 166 75.3
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 9.6e-68 260.4 166 75.3
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 1.6e-67 259.6 167 73.7
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 1.6e-67 259.6 166 73.5
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 2.1e-67 259.2 166 73.5
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 2.1e-67 259.2 169 74.0
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 2.8e-67 258.8 166 73.5
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 4.8e-67 258.1 168 73.2
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 1.4e-66 256.5 164 74.4
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 2.4e-66 255.8 166 72.9
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 3.1e-66 255.4 163 74.2
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 4.1e-66 255.0 161 75.8
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 4.1e-66 255.0 164 72.6
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 5.3e-66 254.6 168 73.2
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 9.0e-66 253.8 164 73.2
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 1.5e-65 253.1 163 73.6
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 2.0e-65 252.7 162 72.8
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 2.0e-65 252.7 165 74.5
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 3.4e-65 251.9 165 72.7
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 4.5e-65 251.5 161 72.7
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 7.6e-65 250.8 168 69.0
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 1.3e-64 250.0 161 70.8
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 1.3e-64 250.0 167 71.3
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 1.7e-64 249.6 164 73.2
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 2.2e-64 249.2 166 71.1
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 3.8e-64 248.4 162 71.0
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 3.8e-64 248.4 179 67.0
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 5.0e-64 248.1 168 71.4
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 8.4e-64 247.3 166 70.5
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 1.1e-63 246.9 164 72.0
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.1e-63 246.9 164 72.6
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 1.1e-63 246.9 166 70.5
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 1.4e-63 246.5 161 72.0
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 1.4e-63 246.5 161 72.0
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 1.4e-63 246.5 164 72.0
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 1.4e-63 246.5 166 69.9
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.5e-63 245.7 166 69.9
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 2.5e-63 245.7 164 70.7
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.2e-63 245.0 164 70.1
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 4.2e-63 245.0 165 71.5
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 4.2e-63 245.0 161 70.8
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 5.5e-63 244.6 168 68.5
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 5.5e-63 244.6 164 70.1
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 7.2e-63 244.2 161 70.8
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 7.2e-63 244.2 161 70.8
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 7.2e-63 244.2 164 72.0
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 1.2e-62 243.4 161 70.2
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 1.2e-62 243.4 164 69.5
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 1.2e-62 243.4 164 70.1
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 1.2e-62 243.4 163 69.9
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.7e-62 242.3 164 68.9
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.7e-62 242.3 164 68.9
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 2.7e-62 242.3 162 71.0
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 2.7e-62 242.3 159 70.4
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 2.7e-62 242.3 161 72.7
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 4.6e-62 241.5 161 70.2
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 4.6e-62 241.5 161 69.6
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 4.6e-62 241.5 162 71.0
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 4.6e-62 241.5 162 69.1
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 6.1e-62 241.1 161 71.4
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 1.3e-61 240.0 161 70.8
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 1.8e-61 239.6 161 67.7
Psat7g019600 Pisum sativum HOM05D005623 ORTHO05D007130 2.3e-61 239.2 162 71.6
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 3.0e-61 238.8 164 68.9
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 6.7e-61 237.7 161 69.6
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 1.1e-60 236.9 167 67.7
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.5e-60 236.5 161 67.1
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 1.5e-60 236.5 165 66.7
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 1.9e-60 236.1 165 67.3
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.5e-60 235.7 166 64.5
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 3.3e-60 235.3 161 68.3
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 3.3e-60 235.3 163 70.6
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 1.3e-59 233.4 161 69.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 2.2e-59 232.6 156 71.8
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 8.2e-59 230.7 162 67.9
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 1.4e-58 229.9 163 67.5
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 1.4e-58 229.9 161 69.6
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 1.8e-58 229.6 164 67.1
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 2.4e-58 229.2 163 69.3
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 9.0e-58 227.3 164 66.5
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.3e-56 223.4 161 64.0
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.4e-55 219.9 161 62.7
vmacro00758 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 4.8e-51 204.9 137 73.0
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 3.6e-46 188.7 165 60.0
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 3.9e-45 185.3 159 59.7
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 6.7e-45 184.5 154 52.6
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 2.6e-44 182.6 155 56.8
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 4.4e-44 181.8 119 70.6
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 1.0e-40 170.6 156 53.2
CBR_g19773 Chara braunii HOM05D005623 ORTHO05D007130 1.3e-40 170.2 155 51.6
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 5.0e-40 168.3 162 55.6
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.8e-34 149.8 102 66.7
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 3.1e-34 149.1 154 51.9
Lj4A556G6 Lonicera japonica HOM05D005623 ORTHO05D007130 1.7e-32 143.3 102 67.6
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 2.3e-29 132.9 135 55.6
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 3.4e-28 129.0 81 76.5
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 8.3e-27 124.4 135 47.4
PGR102G1575 Punica granatum HOM05D005623 ORTHO05D007130 5.9e-25 118.2 72 73.6
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 5.0e-24 115.2 157 40.1
Glyma.08G030000 Glycine max HOM05D005623 ORTHO05D007130 1.4e-21 107.1 108 50.9
SEGI_25582 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 1.6e-17 93.6 82 47.6
Hund25843 Selenicereus undatus HOM05D005623 ORTHO05D007130 1.3e-16 90.5 66 65.2
SEGI_10063 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 1.8e-13 80.1 57 63.2
Cre02.g083065 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 5.2e-13 78.6 122 35.2
C03p64460 Brassica napus HOM05D005623 ORTHO05D007130 8.9e-13 77.8 63 55.6
Eucgr.C03941 Eucalyptus grandis HOM05D005623 ORTHO05D007130 1.8e-10 70.1 59 61.0
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 9.2e-10 67.8 46 65.2
A08p34690 Brassica napus HOM05D002683 ORTHO05D007757 1.6e-06 57.0 104 31.7
Sp1g07910 Schrenkiella parvula HOM05D002683 ORTHO05D007757 3.6e-06 55.8 104 29.8
Aa31LG1G5830 Aethionema arabicum HOM05D002683 ORTHO05D007757 8.0e-06 54.7 159 27.7
CARHR009270 Cardamine hirsuta HOM05D002683 ORTHO05D007757 8.0e-06 54.7 159 27.7


User provided reference genes

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