Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000711g0040 Nicotiana tabacum HOM05D004949 ORTHO05D006006 1.4e-102 376.3 196 100.0
Nitab4.5_0005651g0010 Nicotiana tabacum HOM05D004949 ORTHO05D006006 1.5e-80 303.1 182 88.5
Nitab4.5_0002773g0060 Nicotiana tabacum HOM05D004949 ORTHO05D006006 2.9e-79 298.9 161 95.7
Peaxi162Scf00236g00034 Petunia axillaris HOM05D004949 ORTHO05D006006 5.2e-65 251.5 160 83.1
CAN.G298.24 Capsicum annuum HOM05D004949 ORTHO05D006006 1.2e-64 250.4 161 83.2
Solyc08g076810.4 Solanum lycopersicum HOM05D004949 ORTHO05D006006 4.1e-62 241.9 142 86.6
Sopen08g025330 Solanum pennellii HOM05D004949 ORTHO05D006006 4.1e-62 241.9 142 86.6
Nitab4.5_0003568g0040 Nicotiana tabacum HOM05D004949 ORTHO05D006006 8.9e-57 224.2 181 70.2
Oeu048371.1 Olea europaea HOM05D004949 ORTHO05D006006 3.8e-39 165.6 133 61.7
ECA233G0790 Erigeron canadensis HOM05D004949 ORTHO05D006006 1.6e-37 160.2 170 52.9
Hma1.2p1_0120F.1_g057130 Hydrangea macrophylla HOM05D004949 ORTHO05D006006 2.1e-37 159.8 179 49.7
Rhsim11G0048300 Rhododendron simsii HOM05D004949 ORTHO05D006006 3.5e-37 159.1 150 56.0
Potri.003G093300 Populus trichocarpa HOM05D004949 ORTHO05D006006 5.1e-36 155.2 143 58.0
HanXRQChr02g0049971 Helianthus annuus HOM05D004949 ORTHO05D006006 1.1e-35 154.1 170 47.6
GSVIVG01013143001 Vitis vinifera HOM05D004949 ORTHO05D006006 1.1e-35 154.1 147 57.8
CANSAT21G1226 Cannabis sativa HOM05D004949 ORTHO05D006006 1.5e-35 153.7 150 56.0
Haze_08210 Corylus avellana HOM05D004949 ORTHO05D006006 5.6e-35 151.8 147 54.4
Cfa012457 Carpinus fangiana HOM05D004949 ORTHO05D006006 1.3e-34 150.6 147 54.4
FAN13G2248 Fragaria x ananassa HOM05D004949 ORTHO05D006006 2.8e-34 149.4 141 56.0
Dinv28969 Davidia involucrata HOM05D004949 ORTHO05D006006 3.7e-34 149.1 179 48.6
TAR375G0033 Trochodendron aralioides HOM05D004949 ORTHO05D006006 3.7e-34 149.1 151 55.0
DCAR_008253 Daucus carota HOM05D004949 ORTHO05D006006 4.8e-34 148.7 149 53.7
CSS0006782 Camellia sinensis var. sinensis HOM05D004949 ORTHO05D006006 8.1e-34 147.9 154 52.6
PSO782G4101 Papaver somniferum HOM05D004949 ORTHO05D006006 8.1e-34 147.9 149 53.0
FvH4_5g22370 Fragaria vesca HOM05D004949 ORTHO05D006006 1.1e-33 147.5 141 55.3
FAN18G2708 Fragaria x ananassa HOM05D004949 ORTHO05D006006 1.1e-33 147.5 141 55.3
VMungo1309G0709 Vigna mungo HOM05D004949 ORTHO05D006006 1.1e-33 147.5 149 51.7
Duzib068G0117 Durio zibethinus HOM05D004949 ORTHO05D006006 1.4e-33 147.1 157 49.0
Thhalv10001430m.g Eutrema salsugineum HOM05D004949 ORTHO05D006006 1.4e-33 147.1 144 52.1
Actinidia25973 Actinidia chinensis HOM05D004949 ORTHO05D006006 2.4e-33 146.4 146 54.1
FAN18G3647 Fragaria x ananassa HOM05D004949 ORTHO05D006006 2.4e-33 146.4 141 54.6
Sabra03G0062700 Salix brachista HOM05D004949 ORTHO05D006006 2.4e-33 146.4 141 55.3
Carub.0007s2343 Capsella rubella HOM05D004949 ORTHO05D006006 4.0e-33 145.6 144 50.7
CSS0020726 Camellia sinensis var. sinensis HOM05D004949 ORTHO05D006006 5.3e-33 145.2 154 52.6
COL.COLO4_17003 Corchorus olitorius HOM05D004949 ORTHO05D006006 6.9e-33 144.8 166 47.6
PSO063G1669 Papaver somniferum HOM05D004949 ORTHO05D006006 6.9e-33 144.8 149 52.3
BcaC01g05139 Brassica carinata HOM05D004949 ORTHO05D006006 9.0e-33 144.4 149 50.3
C03p30030 Brassica napus HOM05D004949 ORTHO05D006006 9.0e-33 144.4 149 50.3
BolC3t15350H Brassica oleracea HOM05D004949 ORTHO05D006006 9.0e-33 144.4 149 50.3
SalBow8G0555 Salvia bowleyana HOM05D004949 ORTHO05D006006 9.0e-33 144.4 143 57.3
CARHR224640 Cardamine hirsuta HOM05D004949 ORTHO05D006006 1.2e-32 144.1 145 51.7
Prupe.5G033200 Prunus persica HOM05D004949 ORTHO05D006006 1.2e-32 144.1 142 54.9
QL12p004876 Quercus lobata HOM05D004949 ORTHO05D006006 1.2e-32 144.1 148 52.0
Sp4g27350 Schrenkiella parvula HOM05D004949 ORTHO05D006006 1.2e-32 144.1 176 46.6
Cc08_g02960 Coffea canephora HOM05D004949 ORTHO05D006006 1.5e-32 143.7 156 51.3
PGR042G3443 Punica granatum HOM05D004949 ORTHO05D006006 1.5e-32 143.7 151 49.0
RcHm_v2.0_Chr7g0210111 Rosa chinensis HOM05D004949 ORTHO05D006006 2.0e-32 143.3 148 49.3
SalBow6G3319 Salvia bowleyana HOM05D004949 ORTHO05D006006 2.0e-32 143.3 131 58.8
ATR0665G211 Amborella trichopoda HOM05D004949 ORTHO05D006006 2.6e-32 142.9 153 51.0
AL7G36600 Arabidopsis lyrata HOM05D004949 ORTHO05D006006 4.5e-32 142.1 144 50.7
BraA03t11719Z Brassica rapa HOM05D004949 ORTHO05D006006 4.5e-32 142.1 149 49.7
DCAR_028920 Daucus carota HOM05D004949 ORTHO05D006006 4.5e-32 142.1 149 52.3
Phvul.003G284400 Phaseolus vulgaris HOM05D004949 ORTHO05D006006 4.5e-32 142.1 149 51.0
Aa31LG6G660 Aethionema arabicum HOM05D004949 ORTHO05D006006 5.8e-32 141.7 147 49.0
Glyma.08G270900 Glycine max HOM05D004949 ORTHO05D006006 5.8e-32 141.7 156 49.4
Sc01g0007370 Simmondsia chinensis HOM05D004949 ORTHO05D006006 5.8e-32 141.7 155 49.0
CsaV3_3G001560 Cucumis sativus L. HOM05D004949 ORTHO05D006006 9.9e-32 141.0 144 52.1
BcaB01g03270 Brassica carinata HOM05D004949 ORTHO05D006006 1.7e-31 140.2 149 49.0
Nn1g00131 Nelumbo nucifera HOM05D004949 ORTHO05D006006 1.7e-31 140.2 159 48.4
Eucgr.E00272 Eucalyptus grandis HOM05D004949 ORTHO05D006006 2.2e-31 139.8 146 50.0
Manes.17G017708 Manihot esculenta HOM05D004949 ORTHO05D006006 2.9e-31 139.4 142 52.1
TWI15G0747 Tripterygium wilfordii HOM05D004949 ORTHO05D006006 2.9e-31 139.4 143 56.6
A03p25190 Brassica napus HOM05D004949 ORTHO05D006006 3.8e-31 139.0 149 50.3
Lsat_1_v5_gn_6_4100 Lactuca sativa HOM05D004949 ORTHO05D006006 3.8e-31 139.0 150 52.7
Aqoxy3G00659 Aquilegia oxysepala HOM05D004949 ORTHO05D006006 1.4e-30 137.1 158 48.1
Aqoxy3G01363 Aquilegia oxysepala HOM05D004949 ORTHO05D006006 1.9e-30 136.7 157 47.1
VMungo0251G0718 Vigna mungo HOM05D004949 ORTHO05D006006 1.9e-30 136.7 149 49.7
Ciclev10031452m.g Citrus clementina HOM05D004949 ORTHO05D006006 2.5e-30 136.3 145 51.0
CiPaw.12G064900 Carya illinoinensis HOM05D004949 ORTHO05D006006 4.2e-30 135.6 162 48.1
Lj4g0000928 Lotus japonicus HOM05D004949 ORTHO05D006006 4.2e-30 135.6 144 50.7
arahy.Tifrunner.gnm1.ann1.M3M86A Arachis hypogaea HOM05D004949 ORTHO05D006006 5.5e-30 135.2 156 47.4
Zm00001eb018410 Zea mays HOM05D004949 ORTHO05D006006 5.5e-30 135.2 152 49.3
AT4G17910 Arabidopsis thaliana HOM05D004949 ORTHO05D006006 7.1e-30 134.8 170 45.3
arahy.Tifrunner.gnm1.ann1.78T75P Arachis hypogaea HOM05D004949 ORTHO05D006006 7.1e-30 134.8 156 46.8
Lalb_Chr05g0228811 Lupinus albus HOM05D004949 ORTHO05D006006 1.2e-29 134.0 144 50.7
Zm00001eb392220 Zea mays HOM05D004949 ORTHO05D006006 1.2e-29 134.0 127 52.8
Gorai.003G183400 Gossypium raimondii HOM05D004949 ORTHO05D006006 2.7e-29 132.9 128 51.6
Gohir.A03G000052 Gossypium hirsutum HOM05D004949 ORTHO05D006006 6.0e-29 131.7 128 51.6
Gohir.D03G172700 Gossypium hirsutum HOM05D004949 ORTHO05D006006 6.0e-29 131.7 128 50.8
MBI04_g33883_MAGBIO Magnolia biondii HOM05D004949 ORTHO05D006006 1.3e-28 130.6 151 50.3
Gohir.A09G031300 Gossypium hirsutum HOM05D004949 ORTHO05D006006 2.3e-28 129.8 126 51.6
Ca_14051_v3 Cicer arietinum L. HOM05D004949 ORTHO05D006006 3.0e-28 129.4 146 47.9
Atru.chr6.1656 Acer truncatum HOM05D004949 ORTHO05D006006 5.1e-28 128.6 147 49.0
THA.LOC104812834 Tarenaya hassleriana HOM05D004949 ORTHO05D006006 1.9e-27 126.7 132 48.5
vmacro00318 Vaccinium macrocarpon HOM05D004949 ORTHO05D006006 1.9e-27 126.7 121 53.7
Os03g0378200 Oryza sativa ssp. japonica HOM05D004949 ORTHO05D006006 5.6e-27 125.2 152 46.7
Sed0027872 Sechium edule HOM05D004949 ORTHO05D006006 1.1e-25 120.9 144 45.1
MELO3C013842.2 Cucumis melo HOM05D004949 ORTHO05D006006 7.6e-24 114.8 149 47.0
Psat4g121520 Pisum sativum HOM05D004949 ORTHO05D006006 7.6e-24 114.8 110 51.8
HPP92_016910 Vanilla planifolia HOM05D004949 ORTHO05D006006 2.2e-23 113.2 108 53.7
Mapoly0029s0019 Marchantia polymorpha HOM05D004949 ORTHO05D006006 2.9e-23 112.8 133 47.4
Pp3c15_10960 Physcomitrium patens HOM05D004949 ORTHO05D006006 2.9e-23 112.8 150 44.0
SEGI_29978 Sequoiadendron giganteum HOM05D004949 ORTHO05D006006 8.4e-23 111.3 130 53.1
Medtr8g066760 Medicago truncatula HOM05D004949 ORTHO05D006006 1.4e-22 110.5 170 38.8
MD06G1036200 Malus domestica HOM05D004949 ORTHO05D006006 3.2e-22 109.4 119 50.4
Migut.L01002 Erythranthe guttata HOM05D004949 ORTHO05D006006 3.5e-21 105.9 69 76.8
FAN04G2495 Fragaria x ananassa HOM05D004949 ORTHO05D006006 1.8e-20 103.6 114 50.0
SMO351G0610 Selaginella moellendorffii HOM05D004949 ORTHO05D006006 5.1e-20 102.1 120 50.8
Psat7g200760 Pisum sativum HOM05D004949 ORTHO05D006006 2.5e-19 99.8 119 47.1
Migut.O00927 Erythranthe guttata HOM05D004949 ORTHO05D006006 4.3e-19 99.0 120 50.8
Aa31LG2G21460 Aethionema arabicum HOM05D004949 ORTHO05D006006 1.6e-18 97.1 60 73.3
unitig_0.g2339 Utricularia gibba HOM05D004949 ORTHO05D006006 1.6e-18 97.1 140 45.0
Lj8A304G48 Lonicera japonica HOM05D004949 ORTHO05D006006 2.2e-18 96.7 54 81.5
MSTRG.7638 Avicennia marina HOM05D004949 ORTHO05D006006 8.2e-18 94.7 53 84.9
Gohir.A06G130506 Gossypium hirsutum HOM05D004949 ORTHO05D006006 1.8e-17 93.6 89 53.9
AagrBONN_evm.TU.Sc2ySwM_368.549 Anthoceros agrestis HOM05D004949 ORTHO05D006006 3.1e-17 92.8 106 50.9
CBR_g46224 Chara braunii HOM05D004949 ORTHO05D006006 5.3e-17 92.0 131 43.5
EL10Ac5g12089 Beta vulgaris HOM05D004949 ORTHO05D006006 1.5e-16 90.5 100 49.0
Hund11225 Selenicereus undatus HOM05D004949 ORTHO05D006006 1.5e-16 90.5 51 78.4
MD00G1071700 Malus domestica HOM05D004949 ORTHO05D006006 2.6e-16 89.7 83 51.8
SGA_v2.0_scaffold38G15014 Striga asiatica HOM05D004949 ORTHO05D006006 2.6e-16 89.7 124 45.2
SHI07305 Sapria himalayana HOM05D004949 ORTHO05D006006 3.2e-14 82.8 50 74.0
Thecc.03G225400 Theobroma cacao HOM05D004949 ORTHO05D006006 2.1e-13 80.1 155 34.2
TPR.G40857 Trifolium pratense HOM05D004949 ORTHO05D006006 2.3e-12 76.6 81 48.1
Cre13.g587200 Chlamydomonas reinhardtii HOM05D004949 ORTHO05D006006 5.1e-12 75.5 54 63.0
CDE06G2155 Ceratophyllum demersum HOM05D004949 ORTHO05D006006 2.0e-11 73.6 166 32.5
PSO541G1551 Papaver somniferum HOM05D004949 ORTHO05D009901 2.2e-10 70.1 62 53.2
Cfa022893 Carpinus fangiana HOM05D004949 ORTHO05D006006 1.4e-09 67.4 53 54.7
AUR62018700 Chenopodium quinoa HOM05D004949 ORTHO05D006006 3.4e-08 62.8 144 31.9
PRCOL_00001577 Prasinoderma coloniale HOM05D004949 ORTHO05D006006 1.0e-07 61.2 59 50.8
COL.COLO4_04261 Corchorus olitorius HOM05D040554 ORTHO05D010957 5.5e-06 55.5 32 75.0


User provided reference genes

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