Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000709g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-56 222.2 111 100.0
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.4e-36 153.7 91 80.2
Nitab4.5_0001140g0240 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.2e-35 151.8 91 80.2
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.9e-34 147.1 81 86.4
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-33 146.4 91 76.9
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-33 146.4 105 71.4
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-32 142.5 102 72.5
Nitab4.5_0008167g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-32 142.1 105 68.6
Nitab4.5_0011642g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-32 141.7 105 68.6
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.3e-32 141.4 111 65.8
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.6e-32 141.0 111 65.8
Nitab4.5_0000444g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.6e-32 140.2 82 84.1
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-31 139.8 102 70.6
Nitab4.5_0005869g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-31 139.4 91 76.9
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-31 138.3 113 63.7
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.1e-31 137.1 91 75.8
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.0e-30 134.8 111 64.0
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.0e-30 134.8 111 64.0
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-29 131.7 111 62.2
Nitab4.5_0001030g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-29 131.7 134 54.5
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.5e-29 131.3 111 62.2
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-29 131.0 111 62.2
Nitab4.5_0008167g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-28 129.4 109 62.4
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-28 129.4 111 62.2
Nitab4.5_0004282g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-28 128.6 102 65.7
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.8e-28 128.3 105 62.9
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.9e-28 127.9 111 60.4
Nitab4.5_0000725g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-27 125.9 99 66.7
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.1e-27 124.0 82 72.0
Nitab4.5_0006248g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-26 122.9 99 64.6
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-25 119.8 110 58.2
Nitab4.5_0003730g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.7e-25 117.5 151 46.4
Nitab4.5_0004496g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-24 116.7 89 67.4
Nitab4.5_0007636g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.3e-24 114.8 66 81.8
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.4e-24 114.0 57 93.0
Nitab4.5_0001140g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.4e-24 114.0 57 93.0
Nitab4.5_0000347g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-23 112.8 103 57.3
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-23 112.5 59 88.1
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-22 110.2 57 89.5
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.3e-22 107.8 57 86.0
Nitab4.5_0002755g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.9e-22 107.5 58 86.2
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.9e-22 107.5 58 84.5
Nitab4.5_0015150g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.9e-22 107.5 60 80.0
Nitab4.5_0000648g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.6e-21 105.5 58 84.5
Nitab4.5_0000692g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-20 103.2 57 86.0
Nitab4.5_0000207g0350 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-20 102.8 57 82.5
Nitab4.5_0000814g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-20 102.1 57 84.2
Nitab4.5_0002356g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.9e-20 101.3 64 78.1
Nitab4.5_0000632g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.4e-20 100.5 110 52.7
Nitab4.5_0001816g0180 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.1e-19 97.4 57 80.7
Nitab4.5_0000028g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.3e-19 97.1 117 50.4
Nitab4.5_0010319g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.5e-18 95.1 55 76.4
Nitab4.5_0001446g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-17 93.6 47 93.6
Nitab4.5_0005260g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-17 93.2 91 53.8
Nitab4.5_0003772g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.3e-17 92.4 79 59.5
Nitab4.5_0008756g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-16 89.0 48 83.3
Nitab4.5_0001361g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.3e-16 88.2 57 70.2
Nitab4.5_0015310g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.7e-16 87.0 49 79.6
Nitab4.5_0003264g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-15 85.1 45 86.7
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.7e-15 85.1 105 41.0
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 6.9e-14 80.9 111 36.0
Nitab4.5_0002495g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.0e-14 80.5 39 92.3
Solyc12g017670.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 9.0e-14 80.5 98 41.8
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 2.0e-13 79.3 111 37.8
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-13 79.0 111 36.0
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-13 78.6 111 37.8
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 4.5e-13 78.2 111 36.0
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 4.5e-13 78.2 120 39.2
Solyc07g041820.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 5.9e-13 77.8 115 38.3
Nitab4.5_0000678g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.6e-13 77.4 90 48.9
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 7.6e-13 77.4 115 37.4
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-12 76.3 109 37.6
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 2.9e-12 75.5 111 36.0
Nitab4.5_0005093g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.8e-12 75.1 90 50.0
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-11 73.6 64 50.0
Nitab4.5_0000853g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-11 72.8 43 74.4
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-11 72.8 102 38.2
Sopen12g014500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-11 72.8 65 49.2
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-11 72.4 85 50.6
Nitab4.5_0009017g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-11 72.4 81 51.9
Solyc06g150104.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 2.5e-11 72.4 86 40.7
Solyc08g150114.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 5.5e-11 71.2 56 55.4
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 5.5e-11 71.2 65 47.7
CAN.G1222.17 Capsicum annuum HOM05D000679 ORTHO05D000137 7.2e-11 70.9 57 56.1
Solyc03g150143.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 7.2e-11 70.9 76 40.8
Solyc09g150106.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.2e-10 70.1 65 47.7
Solyc10g047822.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.2e-10 70.1 62 53.2
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.6e-10 69.7 65 47.7
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 1.6e-10 69.7 65 47.7
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 1.6e-10 69.7 65 47.7
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 1.6e-10 69.7 65 47.7
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 1.6e-10 69.7 65 47.7
Nitab4.5_0002612g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-10 69.3 91 47.3
Sopen06g010730 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-10 69.3 60 50.0
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 2.1e-10 69.3 65 46.2
Solyc07g018397.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 4.6e-10 68.2 73 39.7
Sopen03g025990 Solanum pennellii HOM05D000679 ORTHO05D030640 4.6e-10 68.2 58 50.0
CAN.G1079.4 Capsicum annuum HOM05D000679 ORTHO05D000137 6.1e-10 67.8 57 49.1
Sopen05g009150 Solanum pennellii HOM05D009268 ORTHO05D011733 6.1e-10 67.8 80 40.0
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.9e-09 65.1 30 96.7
Solyc01g057857.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.9e-09 65.1 54 51.9
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 5.1e-09 64.7 111 32.4
CAN.G219.52 Capsicum annuum HOM05D000679 ORTHO05D000137 1.9e-08 62.8 42 61.9
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 3.3e-08 62.0 62 41.9
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 4.3e-08 61.6 75 42.7
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 5.7e-08 61.2 68 35.3
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 7.4e-08 60.8 68 35.3
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 7.4e-08 60.8 68 35.3
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 7.4e-08 60.8 68 35.3
Nitab4.5_0002333g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.7e-08 60.5 54 53.7
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 9.7e-08 60.5 86 38.4
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 9.7e-08 60.5 86 38.4
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 9.7e-08 60.5 86 38.4
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 60.1 58 43.1
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 60.1 58 43.1
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 60.1 58 43.1
CAN.G263.3 Capsicum annuum HOM05D000679 ORTHO05D000482 1.7e-07 59.7 43 55.8
Nitab4.5_0004195g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-07 59.7 51 60.8
PGSC0003DMG400038255 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.2e-07 59.3 68 35.3
PGSC0003DMG400047122 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.2e-07 59.3 57 43.9
CAN.G1389.27 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-07 58.5 79 36.7
CAN.G1778.1 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-07 58.5 56 44.6
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-07 58.5 74 39.2
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 3.7e-07 58.5 58 43.1
CAN.G687.15 Capsicum annuum HOM05D000004 ORTHO05D000002 4.8e-07 58.2 60 40.0
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 4.8e-07 58.2 55 45.5
CAN.G165.29 Capsicum annuum HOM05D000541 ORTHO05D000137 6.3e-07 57.8 108 31.5
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 8.2e-07 57.4 60 40.0
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.1e-06 57.0 68 33.8
CAN.G476.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 56.6 52 46.2
Sopen03g030630 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 56.6 56 42.9
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 56.6 56 42.9
CAN.G639.25 Capsicum annuum HOM05D000679 ORTHO05D000137 3.1e-06 55.5 96 34.4
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.1e-06 55.5 64 40.6
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 55.5 73 39.7
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.1e-06 55.5 68 33.8
CAN.G258.7 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-06 55.1 52 42.3
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-06 55.1 84 36.9
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-06 55.1 59 40.7
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.1e-06 55.1 68 33.8
CAN.G1316.3 Capsicum annuum HOM05D000679 ORTHO05D000137 5.3e-06 54.7 105 32.4
CAN.G1808.5 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-06 54.7 61 36.1
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-06 54.7 54 44.4
CAN.G726.5 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-06 54.7 63 36.5
Sopen10g006880 Solanum pennellii HOM05D000541 ORTHO05D000137 6.9e-06 54.3 56 41.1
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 9.1e-06 53.9 108 35.2
CAN.G53.11 Capsicum annuum HOM05D000679 ORTHO05D000137 9.1e-06 53.9 51 49.0
CAN.G630.75 Capsicum annuum HOM05D000541 ORTHO05D000137 9.1e-06 53.9 62 38.7


User provided reference genes

Program Settings