Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000707g0160 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.8e-36 155.2 71 100.0
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.2e-35 152.5 71 97.2
Peaxi162Scf00694g00125 Petunia axillaris HOM05D003119 ORTHO05D003559 3.5e-35 151.0 71 97.2
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 5.0e-34 147.1 71 94.4
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 1.9e-33 145.2 71 90.1
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 2.5e-33 144.8 71 91.5
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 2.5e-33 144.8 71 91.5
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 1.6e-32 142.1 71 88.7
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 2.8e-32 141.4 71 85.9
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 8.0e-32 139.8 71 87.3
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 8.0e-32 139.8 71 87.3
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 1.0e-31 139.4 71 87.3
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 1.0e-31 139.4 71 87.3
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 1.0e-31 139.4 71 85.9
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 1.8e-31 138.7 71 85.9
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.3e-31 138.3 71 84.5
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.3e-31 138.3 71 84.5
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 2.3e-31 138.3 71 85.9
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 4.0e-31 137.5 71 84.5
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 4.0e-31 137.5 71 84.5
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 4.0e-31 137.5 71 85.9
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 84.5
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 85.9
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 85.9
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 84.5
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 84.5
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 5.2e-31 137.1 71 87.3
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 6.8e-31 136.7 71 84.5
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 6.8e-31 136.7 71 84.5
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 8.9e-31 136.3 70 87.1
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 8.9e-31 136.3 71 85.9
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 8.9e-31 136.3 71 83.1
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 8.9e-31 136.3 71 84.5
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 8.9e-31 136.3 71 84.5
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 1.2e-30 136.0 71 84.5
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.2e-30 136.0 71 83.1
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 1.2e-30 136.0 71 84.5
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 1.2e-30 136.0 71 83.1
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 1.2e-30 136.0 71 84.5
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.5e-30 135.6 71 84.5
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 1.5e-30 135.6 71 83.1
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 2.0e-30 135.2 71 83.1
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 2.0e-30 135.2 71 83.1
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 2.0e-30 135.2 71 84.5
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 2.6e-30 134.8 71 84.5
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 2.6e-30 134.8 71 81.7
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 4.4e-30 134.0 71 83.1
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 4.4e-30 134.0 71 83.1
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 4.4e-30 134.0 71 83.1
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 5.8e-30 133.7 70 82.9
Lj7C574T11 Lonicera japonica HOM05D003119 ORTHO05D003559 5.8e-30 133.7 71 81.7
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 7.5e-30 133.3 71 80.3
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 9.8e-30 132.9 71 78.9
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 9.8e-30 132.9 71 80.3
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 9.8e-30 132.9 71 81.7
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 1.7e-29 132.1 71 80.3
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 1.7e-29 132.1 71 81.7
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 1.7e-29 132.1 71 80.3
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.9e-29 131.3 71 81.7
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.7e-29 131.0 71 81.7
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 4.9e-29 130.6 71 83.1
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 4.9e-29 130.6 71 78.9
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 6.4e-29 130.2 71 80.3
C02p06360 Brassica napus HOM05D003119 ORTHO05D003559 6.4e-29 130.2 71 80.3
BolC2t06579H Brassica oleracea HOM05D003119 ORTHO05D003559 6.4e-29 130.2 71 80.3
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 6.4e-29 130.2 71 80.3
A02p02110 Brassica napus HOM05D003119 ORTHO05D003559 8.3e-29 129.8 71 78.9
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 8.3e-29 129.8 71 78.9
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 8.3e-29 129.8 71 78.9
BraA02t05183Z Brassica rapa HOM05D003119 ORTHO05D003559 1.1e-28 129.4 71 78.9
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 2.4e-28 128.3 71 76.1
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 3.2e-28 127.9 71 77.5
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 4.1e-28 127.5 71 76.1
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 4.1e-28 127.5 71 77.5
CDE07G0712 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 7.0e-28 126.7 69 75.4
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 9.2e-28 126.3 71 77.5
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 9.2e-28 126.3 71 78.9
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 1.2e-27 125.9 71 76.1
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 4.6e-27 124.0 71 76.1
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 6.0e-27 123.6 71 74.6
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 7.8e-27 123.2 71 70.4
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 1.0e-26 122.9 71 77.5
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 1.0e-26 122.9 71 73.2
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 1.7e-26 122.1 71 71.8
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 2.3e-26 121.7 71 71.8
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 2.3e-26 121.7 70 71.4
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 2.3e-26 121.7 71 73.2
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 2.3e-26 121.7 71 74.6
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 3.0e-26 121.3 71 74.6
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 5.0e-26 120.6 71 73.2
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 6.6e-26 120.2 71 71.8
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 8.6e-26 119.8 71 71.8
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 8.6e-26 119.8 71 70.4
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 8.6e-26 119.8 71 71.8
CAN.G853.14 Capsicum annuum HOM05D003119 ORTHO05D003559 1.1e-25 119.4 71 70.4
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 1.1e-25 119.4 62 82.3
Solyc03g150154.1 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.1e-25 119.4 71 71.8
QL04p009329 Quercus lobata HOM05D003119 ORTHO05D003559 1.5e-25 119.0 71 73.2
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 1.5e-25 119.0 71 73.2
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.9e-25 118.6 71 69.0
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.9e-25 118.6 71 70.4
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 2.5e-25 118.2 71 67.6
HanXRQChr09g0271871 Helianthus annuus HOM05D003119 ORTHO05D003559 3.3e-25 117.9 71 69.0
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.3e-25 117.9 71 70.4
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 4.3e-25 117.5 69 71.0
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 4.3e-25 117.5 71 71.8
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 5.6e-25 117.1 71 69.0
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 5.6e-25 117.1 71 70.4
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 9.5e-25 116.3 71 70.4
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 9.5e-25 116.3 70 71.4
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 9.5e-25 116.3 71 71.8
QL04p008931 Quercus lobata HOM05D003119 ORTHO05D003559 9.5e-25 116.3 71 73.2
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 9.5e-25 116.3 69 73.9
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.2e-24 115.9 71 70.4
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 1.2e-24 115.9 69 71.0
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.2e-24 115.9 71 71.8
MBI14_g41235_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 1.6e-24 115.5 71 69.0
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 1.6e-24 115.5 71 67.6
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 1.6e-24 115.5 71 67.6
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 2.8e-24 114.8 69 69.6
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 2.8e-24 114.8 70 71.4
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.8e-24 114.8 69 72.5
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 3.6e-24 114.4 70 70.0
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 3.6e-24 114.4 69 69.6
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 3.6e-24 114.4 70 71.4
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 3.6e-24 114.4 70 70.0
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 4.7e-24 114.0 71 67.6
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 4.7e-24 114.0 71 67.6
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 6.2e-24 113.6 71 69.0
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 6.2e-24 113.6 71 67.6
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 8.0e-24 113.2 70 70.0
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 1.1e-23 112.8 71 70.4
VMungo1309G0904 Vigna mungo HOM05D003119 ORTHO05D003559 1.1e-23 112.8 71 70.4
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 1.8e-23 112.1 71 64.8
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 1.8e-23 112.1 71 66.2
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 1.8e-23 112.1 71 69.0
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 1.8e-23 112.1 71 70.4
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 1.8e-23 112.1 71 67.6
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 3.1e-23 111.3 71 67.6
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 4.0e-23 110.9 71 66.2
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 4.0e-23 110.9 71 66.2
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 4.0e-23 110.9 71 66.2
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 4.0e-23 110.9 71 66.2
RcHm_v2.0_Chr7g0179731 Rosa chinensis HOM05D003119 ORTHO05D003559 4.0e-23 110.9 71 66.2
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 6.8e-23 110.2 71 66.2
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 8.9e-23 109.8 71 64.8
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 8.9e-23 109.8 71 64.8
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 8.9e-23 109.8 71 67.6
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.2e-22 109.4 71 63.4
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 2.0e-22 108.6 71 66.2
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 3.4e-22 107.8 69 66.7
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 2.2e-21 105.1 71 63.4
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 2.4e-20 101.7 67 64.2
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.6e-19 99.0 71 60.6
Cpa.g.sc35.41 Carica papaya HOM05D003119 ORTHO05D003559 3.5e-19 97.8 63 65.1
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 7.8e-19 96.7 62 64.5
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 1.3e-18 95.9 70 62.9
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 3.2e-12 74.7 36 80.6
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 2.1e-11 72.0 35 80.0
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 2.3e-10 68.6 41 70.7
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 3.0e-10 68.2 41 65.9
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 1.5e-09 65.9 40 75.0
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 3.6e-08 61.2 36 63.9
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 4.7e-08 60.8 34 85.3
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 3.4e-06 54.7 31 67.7
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 5.8e-06 53.9 60 41.7


User provided reference genes

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