Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000704g0070 Nicotiana tabacum HOM05D005237 ORTHO05D006189 2.1e-143 512.3 252 100.0
Nitab4.5_0002267g0030 Nicotiana tabacum HOM05D005237 ORTHO05D006189 7.6e-93 344.4 190 90.5
PGSC0003DMG400030712 Solanum tuberosum HOM05D005237 ORTHO05D006189 1.6e-87 326.6 190 85.3
Sopen07g003620 Solanum pennellii HOM05D005237 ORTHO05D006189 2.1e-87 326.2 190 85.8
Solyc07g007630.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 2.8e-87 325.9 190 85.3
Peaxi162Scf00088g00918 Petunia axillaris HOM05D005237 ORTHO05D006189 1.1e-86 323.9 190 84.2
Actinidia07336 Actinidia chinensis HOM05D005237 ORTHO05D006189 7.6e-85 317.8 190 82.6
vmacro07739 Vaccinium macrocarpon HOM05D005237 ORTHO05D006189 1.7e-84 316.6 206 77.7
Oeu000523.1 Olea europaea HOM05D005237 ORTHO05D006189 2.2e-84 316.2 190 81.6
Rhsim01G0059600 Rhododendron simsii HOM05D005237 ORTHO05D006189 2.9e-84 315.8 190 82.1
Duzib150G0783 Durio zibethinus HOM05D005237 ORTHO05D006189 1.9e-83 313.2 190 81.1
Lj7A437T44 Lonicera japonica HOM05D005237 ORTHO05D006189 2.5e-83 312.8 189 81.0
CsaV3_2G003270 Cucumis sativus L. HOM05D005237 ORTHO05D006189 3.2e-83 312.4 190 81.1
Glyma.17G108800 Glycine max HOM05D005237 ORTHO05D006189 3.2e-83 312.4 190 80.5
GSVIVG01012837001 Vitis vinifera HOM05D005237 ORTHO05D006189 3.2e-83 312.4 204 76.5
CiPaw.03G250600 Carya illinoinensis HOM05D005237 ORTHO05D006189 4.2e-83 312.0 190 81.1
ClCG11G003410 Citrullus lanatus HOM05D005237 ORTHO05D006189 5.5e-83 311.6 190 81.1
Haze_25466 Corylus avellana HOM05D005237 ORTHO05D006189 5.5e-83 311.6 190 81.1
Haze_25470 Corylus avellana HOM05D005237 ORTHO05D006189 5.5e-83 311.6 190 81.1
Eucgr.C04376 Eucalyptus grandis HOM05D005237 ORTHO05D006189 5.5e-83 311.6 190 80.5
Dinv41456 Davidia involucrata HOM05D005237 ORTHO05D006189 7.1e-83 311.2 190 80.5
SGA_v2.0_scaffold37G14721 Striga asiatica HOM05D005237 ORTHO05D006189 7.1e-83 311.2 190 81.1
Lalb_Chr13g0301391 Lupinus albus HOM05D005237 ORTHO05D006189 9.3e-83 310.8 190 79.5
QL02p090325 Quercus lobata HOM05D005237 ORTHO05D006189 9.3e-83 310.8 189 81.0
Phvul.003G171200 Phaseolus vulgaris HOM05D005237 ORTHO05D006189 1.2e-82 310.5 190 80.5
Cc07_g18400 Coffea canephora HOM05D005237 ORTHO05D006189 2.1e-82 309.7 190 82.1
Glyma.13G162500 Glycine max HOM05D005237 ORTHO05D006189 2.7e-82 309.3 190 80.0
Ah.09g224420 Amaranthus hybridus HOM05D005237 ORTHO05D006189 4.6e-82 308.5 187 79.7
Lj4g0017742 Lotus japonicus HOM05D005237 ORTHO05D006189 4.6e-82 308.5 190 80.0
Medtr4g115900 Medicago truncatula HOM05D005237 ORTHO05D006189 4.6e-82 308.5 187 80.7
Psat0s3428g0040 Pisum sativum HOM05D005237 ORTHO05D006189 4.6e-82 308.5 187 80.2
Gohir.A08G089300 Gossypium hirsutum HOM05D005237 ORTHO05D006189 6.0e-82 308.1 190 80.5
Lalb_Chr12g0198311 Lupinus albus HOM05D005237 ORTHO05D006189 6.0e-82 308.1 190 78.9
Ciclev10009685m.g Citrus clementina HOM05D005237 ORTHO05D006189 7.9e-82 307.8 190 80.0
Prupe.7G251500 Prunus persica HOM05D005237 ORTHO05D006189 7.9e-82 307.8 189 79.9
Potri.018G123100 Populus trichocarpa HOM05D005237 ORTHO05D006189 1.0e-81 307.4 187 80.2
SalBow1G1295 Salvia bowleyana HOM05D005237 ORTHO05D006189 1.0e-81 307.4 190 80.5
Migut.K00410 Erythranthe guttata HOM05D005237 ORTHO05D006189 1.3e-81 307.0 187 80.7
TWI32G1192 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 1.3e-81 307.0 190 78.9
Sabra18G0104800 Salix brachista HOM05D005237 ORTHO05D006189 1.8e-81 306.6 187 80.2
Aa31LG2G10030 Aethionema arabicum HOM05D005237 ORTHO05D006189 2.3e-81 306.2 190 78.4
CSS0004544 Camellia sinensis var. sinensis HOM05D005237 ORTHO05D006189 2.3e-81 306.2 226 69.5
Hma1.2p1_0343F.1_g130850 Hydrangea macrophylla HOM05D005237 ORTHO05D006189 2.3e-81 306.2 189 78.3
AT1G60430 Arabidopsis thaliana HOM05D005237 ORTHO05D006189 3.0e-81 305.8 188 78.7
Cpa.g.sc277.15 Carica papaya HOM05D005237 ORTHO05D006189 3.9e-81 305.4 190 78.9
Carub.0002s0491 Capsella rubella HOM05D005237 ORTHO05D006189 5.1e-81 305.1 188 78.7
CARHR052620 Cardamine hirsuta HOM05D005237 ORTHO05D006189 5.1e-81 305.1 188 78.7
Thhalv10023668m.g Eutrema salsugineum HOM05D005237 ORTHO05D006189 5.1e-81 305.1 188 78.7
Gorai.004G108300 Gossypium raimondii HOM05D005237 ORTHO05D006189 5.1e-81 305.1 190 79.5
Sed0005481 Sechium edule HOM05D005237 ORTHO05D006189 5.1e-81 305.1 190 79.5
unitig_748.g7174 Utricularia gibba HOM05D005237 ORTHO05D006189 5.1e-81 305.1 189 79.4
FvH4_3g33280 Fragaria vesca HOM05D005237 ORTHO05D006189 6.7e-81 304.7 189 79.9
FAN11G2421 Fragaria x ananassa HOM05D005237 ORTHO05D006189 6.7e-81 304.7 189 79.9
EL10Ac8g18779 Beta vulgaris HOM05D005237 ORTHO05D006189 8.7e-81 304.3 187 79.1
MD02G1020300 Malus domestica HOM05D005237 ORTHO05D006189 1.1e-80 303.9 189 78.3
MD15G1163100 Malus domestica HOM05D005237 ORTHO05D006189 1.1e-80 303.9 189 78.8
Nn8g40617 Nelumbo nucifera HOM05D005237 ORTHO05D006189 1.1e-80 303.9 187 78.6
PGR102G2022 Punica granatum HOM05D005237 ORTHO05D006189 1.1e-80 303.9 187 80.7
AL2G16270 Arabidopsis lyrata HOM05D005237 ORTHO05D006189 1.5e-80 303.5 188 78.2
ECA236G1442 Erigeron canadensis HOM05D005237 ORTHO05D006189 1.5e-80 303.5 187 79.1
Sp2g04330 Schrenkiella parvula HOM05D005237 ORTHO05D006189 1.5e-80 303.5 188 78.2
Hund09300 Selenicereus undatus HOM05D005237 ORTHO05D006189 1.5e-80 303.5 187 78.6
CANSAT11G1632 Cannabis sativa HOM05D005237 ORTHO05D006189 2.5e-80 302.8 190 77.4
Sc18g0000220 Simmondsia chinensis HOM05D005237 ORTHO05D006189 2.5e-80 302.8 187 78.6
arahy.Tifrunner.gnm1.ann1.E2H6AC Arachis hypogaea HOM05D005237 ORTHO05D006189 3.3e-80 302.4 190 78.4
FAN21G0596 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.3e-80 302.4 189 79.4
Sed0006539 Sechium edule HOM05D005237 ORTHO05D006189 3.3e-80 302.4 190 77.9
THA.LOC104815299 Tarenaya hassleriana HOM05D005237 ORTHO05D006189 4.3e-80 302.0 187 78.1
BraA09t37380Z Brassica rapa HOM05D002152 ORTHO05D006189 7.4e-80 301.2 199 74.9
BcaB07g31213 Brassica carinata HOM05D005237 ORTHO05D006189 9.7e-80 300.8 188 77.7
BcaC04g22225 Brassica carinata HOM05D005237 ORTHO05D006189 9.7e-80 300.8 188 77.7
C09p21860 Brassica napus HOM05D002152 ORTHO05D006189 9.7e-80 300.8 188 77.7
Manes.14G117900 Manihot esculenta HOM05D005237 ORTHO05D006189 9.7e-80 300.8 187 78.6
CiPaw.04G176700 Carya illinoinensis HOM05D005237 ORTHO05D006189 1.3e-79 300.4 190 78.9
CDE07G1573 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 1.3e-79 300.4 189 78.3
DCAR_009333 Daucus carota HOM05D005237 ORTHO05D006189 1.3e-79 300.4 187 77.5
HPP92_021894 Vanilla planifolia HOM05D005237 ORTHO05D006189 1.6e-79 300.1 188 77.1
A09p17560 Brassica napus HOM05D002152 ORTHO05D006189 2.2e-79 299.7 188 77.1
Atru.chr7.1980 Acer truncatum HOM05D005237 ORTHO05D006189 4.8e-79 298.5 189 78.3
HanXRQChr06g0180531 Helianthus annuus HOM05D005237 ORTHO05D006189 4.8e-79 298.5 187 77.5
MBI14_g10734_MAGBIO Magnolia biondii HOM05D005237 ORTHO05D006189 6.3e-79 298.1 191 77.5
MSTRG.26338 Avicennia marina HOM05D005237 ORTHO05D006189 8.2e-79 297.7 190 77.9
Aqoxy7G00028 Aquilegia oxysepala HOM05D005237 ORTHO05D006189 1.4e-78 297.0 190 76.8
Potri.006G063400 Populus trichocarpa HOM05D005237 ORTHO05D006189 1.8e-78 296.6 187 78.1
RcHm_v2.0_Chr5g0060671 Rosa chinensis HOM05D005237 ORTHO05D006189 3.1e-78 295.8 189 77.8
Lsat_1_v5_gn_8_61340 Lactuca sativa HOM05D005237 ORTHO05D006189 1.5e-77 293.5 187 77.0
SEGI_28631 Sequoiadendron giganteum HOM05D005237 ORTHO05D006189 3.4e-77 292.4 192 75.0
Zm00001eb238960 Zea mays HOM05D005237 ORTHO05D006189 1.4e-75 287.0 218 67.0
Zm00001eb238970 Zea mays HOM05D005237 ORTHO05D006189 1.4e-75 287.0 218 67.0
Zm00001eb438640 Zea mays HOM05D005237 ORTHO05D006189 1.4e-75 287.0 218 67.0
Zm00001eb438650 Zea mays HOM05D005237 ORTHO05D006189 1.4e-75 287.0 218 67.0
Zm00001eb238940 Zea mays HOM05D005237 ORTHO05D006189 2.5e-75 286.2 188 74.5
Zm00001eb150940 Zea mays HOM05D005237 ORTHO05D006189 9.4e-75 284.3 188 74.5
Dinv36460 Davidia involucrata HOM05D005237 ORTHO05D006189 6.1e-74 281.6 174 79.9
Gohir.D05G014800 Gossypium hirsutum HOM05D005237 ORTHO05D006189 1.8e-73 280.0 188 72.9
Gohir.A05G013700 Gossypium hirsutum HOM05D005237 ORTHO05D006189 3.9e-73 278.9 188 72.3
SHI03217 Sapria himalayana HOM05D005237 ORTHO05D006189 1.5e-72 276.9 181 74.0
Gorai.009G014900 Gossypium raimondii HOM05D005237 ORTHO05D006189 5.7e-72 275.0 190 72.1
Gohir.D08G100500 Gossypium hirsutum HOM05D005237 ORTHO05D006189 1.8e-70 270.0 173 78.6
CDE04G0420 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 2.1e-66 256.5 166 77.7
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 1.4e-65 253.8 164 78.0
BolC9t55091H Brassica oleracea HOM05D002152 ORTHO05D002737 2.0e-64 250.0 162 76.5
CAN.G1382.4 Capsicum annuum HOM05D005237 ORTHO05D006189 2.0e-64 250.0 134 91.8
Pp3c3_23320 Physcomitrium patens HOM05D005237 ORTHO05D006189 9.7e-64 247.7 189 60.8
SMO356G0108 Selaginella moellendorffii HOM05D005237 ORTHO05D006189 1.3e-63 247.3 189 62.4
Pp3c10_12220 Physcomitrium patens HOM05D005237 ORTHO05D006189 1.7e-63 246.9 189 61.4
Mapoly0002s0013 Marchantia polymorpha HOM05D005237 ORTHO05D006189 8.2e-63 244.6 191 62.8
MELO3C004473.2 Cucumis melo HOM05D005237 ORTHO05D006189 4.5e-61 238.8 154 78.6
VMungo1215G1009 Vigna mungo HOM05D005237 ORTHO05D006189 1.3e-60 237.3 191 63.9
COL.COLO4_15552 Corchorus olitorius HOM05D005237 ORTHO05D006189 2.2e-60 236.5 180 68.3
AUR62011203 Chenopodium quinoa HOM05D005237 ORTHO05D006189 7.2e-59 231.5 133 82.7
AUR62013284 Chenopodium quinoa HOM05D005237 ORTHO05D006189 7.2e-59 231.5 145 77.9
TAR626G0602 Trochodendron aralioides HOM05D005237 ORTHO05D006189 9.4e-59 231.1 126 88.1
TPR.G39824 Trifolium pratense HOM05D005237 ORTHO05D006189 4.7e-58 228.8 126 84.1
TWI38G2392 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 6.1e-58 228.4 127 85.8
PSO675G7544 Papaver somniferum HOM05D005237 ORTHO05D006189 1.0e-57 227.6 201 61.2
Duzib187G1805 Durio zibethinus HOM05D005237 ORTHO05D006189 2.0e-56 223.4 140 79.3
Thecc.09G135400 Theobroma cacao HOM05D005237 ORTHO05D006189 2.2e-55 219.9 187 63.1
Os02g0235000 Oryza sativa ssp. japonica HOM05D005237 ORTHO05D006189 4.8e-55 218.8 126 81.7
Zm00001eb238980 Zea mays HOM05D005237 ORTHO05D006189 8.2e-55 218.0 149 73.8
Lsat_1_v5_gn_7_44340 Lactuca sativa HOM05D005237 ORTHO05D006189 7.0e-54 214.9 191 57.6
MD10G1159100 Malus domestica HOM05D005237 ORTHO05D006189 1.2e-53 214.2 127 80.3
FAN25G0883 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.0e-52 211.1 162 68.5
Sopen02g003910 Solanum pennellii HOM05D005237 ORTHO05D006189 4.2e-51 205.7 352 38.1
Peaxi162Scf00113g00061 Petunia axillaris HOM05D005237 ORTHO05D006189 3.6e-50 202.6 135 76.3
VMungo0251G3112 Vigna mungo HOM05D005237 ORTHO05D006189 2.3e-49 199.9 126 79.4
Solyc02g014540.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 1.4e-46 190.7 126 72.2
Ca_21648_v3 Cicer arietinum L. HOM05D005237 ORTHO05D006189 7.5e-40 168.3 126 69.0
Sabra06G0046100 Salix brachista HOM05D005237 ORTHO05D006189 5.9e-37 158.7 102 78.4
FAN16G0279 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.9e-36 156.4 91 83.5
FAN21G3302 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.5e-35 154.1 89 86.5
PGSC0003DMG400003270 Solanum tuberosum HOM05D005237 ORTHO05D006189 3.3e-35 152.9 93 77.4
FAN28G2985 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.8e-34 149.8 116 68.1
Eucgr.I02126 Eucalyptus grandis HOM05D005237 ORTHO05D006189 3.0e-33 146.4 79 84.8
FAN17G0595 Fragaria x ananassa HOM05D005237 ORTHO05D006189 4.0e-33 146.0 95 77.9
FAN17G0540 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.2e-32 144.4 90 81.1
Medtr0320s0040 Medicago truncatula HOM05D005237 ORTHO05D006189 2.0e-32 143.7 98 70.4
FAN02G0796 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.6e-32 143.3 93 77.4
FAN20G0460 Fragaria x ananassa HOM05D005237 ORTHO05D006189 4.4e-32 142.5 89 79.8
Duzib168G1377 Durio zibethinus HOM05D005237 ORTHO05D006189 2.9e-28 129.8 73 86.3
Aa31LG9G5450 Aethionema arabicum HOM05D005237 ORTHO05D006189 7.3e-27 125.2 98 64.3
Eucgr.L01822 Eucalyptus grandis HOM05D005237 ORTHO05D006189 9.5e-27 124.8 79 77.2
Zm00001eb302220 Zea mays HOM05D005237 ORTHO05D006189 1.8e-25 120.6 112 54.5
FAN20G1904 Fragaria x ananassa HOM05D005237 ORTHO05D006189 5.2e-25 119.0 70 82.9
Cre09.g397950 Chlamydomonas reinhardtii HOM05D005237 ORTHO05D006189 2.9e-23 113.2 206 34.0
TAR625G1190 Trochodendron aralioides HOM05D005237 ORTHO05D006189 6.0e-21 105.5 90 61.1
Cc06_g07800 Coffea canephora HOM05D005237 ORTHO05D006189 3.0e-20 103.2 64 76.6
Lsat_1_v5_gn_2_45981 Lactuca sativa HOM05D005237 ORTHO05D003224 8.6e-12 75.1 36 88.9


User provided reference genes

Program Settings