Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000702g0170 Nicotiana tabacum HOM05D001516 ORTHO05D001357 1.7e-108 396.0 199 100.0
Nitab4.5_0011694g0020 Nicotiana tabacum HOM05D001516 ORTHO05D001357 1.3e-95 353.2 185 95.1
Dinv08169 Davidia involucrata HOM05D001516 ORTHO05D001357 6.8e-36 154.8 185 47.6
Dinv40181 Davidia involucrata HOM05D001516 ORTHO05D001357 3.7e-34 149.1 187 46.5
Lj2A499G36 Lonicera japonica HOM05D001516 ORTHO05D001357 6.3e-34 148.3 191 47.1
CSS0038680 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 1.6e-32 143.7 193 44.0
Cc07_g11770 Coffea canephora HOM05D001516 ORTHO05D001357 4.5e-32 142.1 204 45.6
Lsat_1_v5_gn_2_73400 Lactuca sativa HOM05D001516 ORTHO05D001357 3.2e-30 136.0 186 42.5
Actinidia28746 Actinidia chinensis HOM05D002491 ORTHO05D002651 9.5e-30 134.4 176 42.6
ECA238G4466 Erigeron canadensis HOM05D001516 ORTHO05D001357 6.1e-29 131.7 193 40.9
HanXRQChr09g0258161 Helianthus annuus HOM05D001516 ORTHO05D001357 8.8e-28 127.9 185 39.5
vmacro18462 Vaccinium macrocarpon HOM05D001516 ORTHO05D001357 3.8e-23 112.5 166 39.2
Lalb_Chr16g0391621 Lupinus albus HOM05D001516 ORTHO05D001357 9.5e-22 107.8 175 38.3
CSS0004018 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 1.2e-21 107.5 106 50.0
CiPaw.07G003300 Carya illinoinensis HOM05D001516 ORTHO05D001357 1.8e-20 103.6 183 37.7
Gorai.003G002500 Gossypium raimondii HOM05D001516 ORTHO05D001357 2.3e-20 103.2 196 36.2
Glyma.11G085500 Glycine max HOM05D001516 ORTHO05D001357 4.0e-20 102.4 185 38.4
Cpa.g.sc6.346 Carica papaya HOM05D001516 ORTHO05D001357 1.2e-19 100.9 176 38.1
Lj4A234T62 Lonicera japonica HOM05D001516 ORTHO05D001357 1.2e-19 100.9 100 49.0
TPR.G8368 Trifolium pratense HOM05D001516 ORTHO05D001357 1.2e-19 100.9 178 37.6
Lj2g0007675 Lotus japonicus HOM05D001516 ORTHO05D001357 1.5e-19 100.5 175 38.9
FvH4_1g10460 Fragaria vesca HOM05D001516 ORTHO05D001357 2.6e-19 99.8 191 33.5
FAN19G0893 Fragaria x ananassa HOM05D001516 ORTHO05D001357 2.6e-19 99.8 191 33.5
Gohir.D03G002200 Gossypium hirsutum HOM05D001516 ORTHO05D001357 2.6e-19 99.8 192 35.9
Atru.chr4.1891 Acer truncatum HOM05D001516 ORTHO05D001357 3.4e-19 99.4 190 34.7
FAN26G0778 Fragaria x ananassa HOM05D001516 ORTHO05D001357 4.4e-19 99.0 193 34.7
RcHm_v2.0_Chr2g0097321 Rosa chinensis HOM05D001516 ORTHO05D001357 5.7e-19 98.6 187 35.3
arahy.Tifrunner.gnm1.ann1.JXS3UT Arachis hypogaea HOM05D001516 ORTHO05D001357 9.8e-19 97.8 181 36.5
Gohir.A02G177600 Gossypium hirsutum HOM05D001516 ORTHO05D001357 1.3e-18 97.4 196 35.2
arahy.Tifrunner.gnm1.ann1.G1MIMQ Arachis hypogaea HOM05D001516 ORTHO05D001357 1.7e-18 97.1 181 36.5
QL06p052912 Quercus lobata HOM05D001516 ORTHO05D001357 1.7e-18 97.1 176 33.0
Medtr5g024070 Medicago truncatula HOM05D001516 ORTHO05D001357 2.2e-18 96.7 186 34.9
FAN23G2806 Fragaria x ananassa HOM05D001516 ORTHO05D001357 4.9e-18 95.5 193 32.6
Psat2g149160 Pisum sativum HOM05D001516 ORTHO05D001357 4.9e-18 95.5 174 38.5
Phvul.002G116000 Phaseolus vulgaris HOM05D001516 ORTHO05D001357 1.1e-17 94.4 180 36.1
VMungo1215G1384 Vigna mungo HOM05D001516 ORTHO05D001357 1.1e-17 94.4 172 34.9
MD15G1232500 Malus domestica HOM05D001516 ORTHO05D001357 1.4e-17 94.0 181 34.3
Manes.02G113900 Manihot esculenta HOM05D001516 ORTHO05D001357 1.4e-17 94.0 127 40.9
Glyma.01G159200 Glycine max HOM05D001516 ORTHO05D001357 3.2e-17 92.8 179 35.8
MD02G1117800 Malus domestica HOM05D001516 ORTHO05D001357 7.0e-17 91.7 197 32.5
Prupe.7G181600 Prunus persica HOM05D001516 ORTHO05D001357 1.2e-16 90.9 162 35.8
Lalb_Chr09g0321211 Lupinus albus HOM05D001516 ORTHO05D001357 2.0e-16 90.1 192 38.0
Potri.005G101000 Populus trichocarpa HOM05D001516 ORTHO05D001357 4.6e-16 89.0 185 35.1
Aqoxy6G01631 Aquilegia oxysepala HOM05D001516 ORTHO05D001357 5.9e-16 88.6 172 32.6
CANSAT25G2192 Cannabis sativa HOM05D001516 ORTHO05D001357 1.3e-15 87.4 192 32.8
FAN28G1915 Fragaria x ananassa HOM05D001516 ORTHO05D001357 1.7e-15 87.0 208 29.8
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 1.9e-14 83.6 164 33.5
arahy.Tifrunner.gnm1.ann1.F3ZCPW Arachis hypogaea HOM05D001516 ORTHO05D001357 8.0e-13 78.2 169 35.5
arahy.Tifrunner.gnm1.ann1.ZR07MJ Arachis hypogaea HOM05D001516 ORTHO05D001357 8.0e-13 78.2 169 35.5
ATR0807G179 Amborella trichopoda HOM05D001516 ORTHO05D001357 1.4e-12 77.4 148 33.8
AT4G35590 Arabidopsis thaliana HOM05D001516 ORTHO05D001357 4.0e-12 75.9 180 33.9
Sabra05G0083500 Salix brachista HOM05D001516 ORTHO05D001357 2.0e-11 73.6 186 31.7
Aa31LG6G12560 Aethionema arabicum HOM05D001516 ORTHO05D001357 4.4e-11 72.4 181 32.6
Ciclev10027531m.g Citrus clementina HOM05D001516 ORTHO05D001357 4.4e-11 72.4 144 34.7
BcaNung00579 Brassica carinata HOM05D001516 ORTHO05D001357 5.4e-09 65.5 178 31.5
C01p03390 Brassica napus HOM05D001516 ORTHO05D001357 5.4e-09 65.5 178 31.5
BolC1t00324H Brassica oleracea HOM05D001516 ORTHO05D001357 5.4e-09 65.5 178 31.5
BraA01t00286Z Brassica rapa HOM05D001516 ORTHO05D001357 1.6e-08 63.9 174 31.6
Lj4A234G55 Lonicera japonica HOM05D001516 ORTHO05D001357 3.5e-08 62.8 89 49.4
A01p03040 Brassica napus HOM05D001516 ORTHO05D001357 4.6e-08 62.4 172 31.4
CARHR243930 Cardamine hirsuta HOM05D001516 ORTHO05D001357 1.7e-07 60.5 196 30.6
AL7G15560 Arabidopsis lyrata HOM05D001516 ORTHO05D001357 3.0e-07 59.7 193 30.1
Sp7g33360 Schrenkiella parvula HOM05D001516 ORTHO05D001357 3.0e-07 59.7 195 31.8
Carub.0007s0471 Capsella rubella HOM05D001516 ORTHO05D001357 3.9e-07 59.3 125 36.0
Thecc.01G006000 Theobroma cacao HOM05D001516 ORTHO05D001357 1.1e-06 57.8 133 33.1
Mapoly0022s0128 Marchantia polymorpha HOM05D001516 ORTHO05D001357 1.9e-06 57.0 125 33.6
Thhalv10027037m.g Eutrema salsugineum HOM05D001516 ORTHO05D001357 4.3e-06 55.8 120 31.7


User provided reference genes

Program Settings