Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000699g0160 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.0e-33 144.1 66 100.0
Nitab4.5_0000759g0120 Nicotiana tabacum HOM05D006812 ORTHO05D012242 7.5e-24 113.2 66 77.3
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.4e-22 108.2 57 80.7
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.0e-20 102.8 60 76.7
Nitab4.5_0000514g0180 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.3e-20 101.7 57 78.9
Nitab4.5_0001171g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.6e-20 99.8 57 78.9
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-19 99.4 65 66.2
Nitab4.5_0006703g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.5e-19 99.0 57 77.2
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.9e-19 98.6 54 77.8
Nitab4.5_0000252g0260 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.5e-19 98.2 60 73.3
Nitab4.5_0010262g0010 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.3e-19 97.8 65 64.6
Nitab4.5_0000219g0140 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.2e-18 95.9 54 79.6
Nitab4.5_0000721g0160 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.6e-18 95.5 58 74.1
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-18 95.5 57 71.9
Nitab4.5_0003465g0040 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.8e-18 94.7 57 73.7
Nitab4.5_0000688g0120 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.0e-17 92.8 58 72.4
Nitab4.5_0003132g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.4e-17 92.4 57 71.9
Nitab4.5_0004958g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-17 91.3 47 80.9
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.0e-17 90.9 65 61.5
Nitab4.5_0000638g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.9e-17 89.7 54 74.1
Nitab4.5_0000487g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-16 89.4 52 75.0
Nitab4.5_0008296g0030 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.5e-16 89.0 53 73.6
Nitab4.5_0000105g0460 Nicotiana tabacum HOM05D000033 ORTHO05D012242 1.4e-14 82.4 43 83.7
Nitab4.5_0000078g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.1e-14 81.3 48 70.8
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.5e-13 77.8 57 66.7
Nitab4.5_0002002g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.5e-11 71.6 40 80.0
Nitab4.5_0000011g0230 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-10 69.3 60 53.3
Nitab4.5_0000904g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000137 8.0e-10 66.6 54 57.4
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 8.9e-09 63.2 57 49.1
Nitab4.5_0001317g0150 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.4e-08 60.8 36 69.4
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 1.7e-07 58.9 54 48.1
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 2.9e-07 58.2 54 46.3
CAN.G1139.12 Capsicum annuum HOM05D009195 ORTHO05D000137 4.9e-07 57.4 48 47.9
Nitab4.5_0024925g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.9e-07 57.4 42 61.9
Nitab4.5_0027154g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.9e-07 57.4 32 71.9
Nitab4.5_0011260g0020 Nicotiana tabacum HOM05D006812 ORTHO05D012242 6.4e-07 57.0 58 50.0
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.4e-07 57.0 54 46.3
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-07 56.6 54 44.4
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 8.3e-07 56.6 54 46.3
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 1.1e-06 56.2 48 43.8
Nitab4.5_0003770g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-06 56.2 57 43.9
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 1.4e-06 55.8 48 45.8
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-06 55.8 57 42.1
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 1.9e-06 55.5 45 48.9
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 1.9e-06 55.5 54 44.4
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 3.2e-06 54.7 45 48.9
PGSC0003DMG400008675 Solanum tuberosum HOM05D009268 ORTHO05D011733 4.1e-06 54.3 60 43.3
CAN.G353.18 Capsicum annuum HOM05D009195 ORTHO05D000137 7.0e-06 53.5 45 48.9
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 7.0e-06 53.5 45 46.7
Nitab4.5_0000056g0180 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.0e-06 53.5 62 37.1
CAN.G139.5 Capsicum annuum HOM05D009195 ORTHO05D000137 9.2e-06 53.1 45 46.7
Solyc10g050777.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 9.2e-06 53.1 55 41.8


User provided reference genes

Program Settings