Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-122 441.8 223 100.0
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-96 355.5 232 80.2
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-86 323.6 216 79.6
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-75 284.3 215 71.2
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-62 241.5 239 59.0
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-56 221.9 207 62.3
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-54 215.3 137 82.5
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.1e-54 214.5 140 81.4
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-53 212.6 138 81.2
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-51 207.2 137 79.6
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-50 203.4 139 77.7
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-49 199.1 260 49.2
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-45 186.0 137 73.0
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.9e-45 184.5 139 74.1
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.9e-45 184.5 139 74.1
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-44 184.1 204 54.9
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-43 180.3 110 82.7
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-42 177.2 139 70.5
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-41 172.9 170 58.8
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-40 169.5 124 71.8
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-40 169.5 263 43.7
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-40 169.5 139 68.3
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-40 169.1 139 69.1
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-38 162.2 110 78.2
Nitab4.5_0000021g0990 Nicotiana tabacum HOM05D006864 ORTHO05D282769 1.1e-31 141.0 127 63.8
Nitab4.5_0007137g0050 Nicotiana tabacum HOM05D006864 ORTHO05D284446 3.6e-30 136.0 126 60.3
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-29 133.7 106 66.0
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-29 132.1 85 77.6
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-28 130.2 139 55.4
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-28 129.0 88 76.1
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-27 127.1 72 84.7
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.4e-26 123.2 64 92.2
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-23 112.8 194 36.1
Nitab4.5_0000377g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-18 95.9 124 48.4
Nitab4.5_0002870g0050 Nicotiana tabacum HOM05D006864 ORTHO05D286406 1.0e-16 91.3 65 67.7
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.3e-16 90.9 124 41.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-16 90.5 124 40.3
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.7e-16 88.2 119 42.9
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-15 86.7 239 28.5
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-14 83.6 221 27.1
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-13 81.3 106 40.6
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-13 80.5 112 39.3
Nitab4.5_0002695g0020 Nicotiana tabacum HOM05D006864 ORTHO05D285932 1.5e-12 77.4 75 57.3
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-12 77.0 123 39.0
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-11 74.7 103 40.8
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-11 74.7 103 38.8
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-11 74.3 124 37.1
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-11 74.3 108 38.9
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-11 74.3 97 38.1
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-11 73.9 95 36.8
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-11 73.6 96 37.5
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-11 73.2 97 36.1
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.5e-11 72.0 93 41.9
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.4e-11 71.6 111 38.7
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.4e-11 71.6 95 35.8
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.4e-11 71.6 93 41.9
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-10 71.2 97 34.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-10 70.9 93 43.0
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.4e-10 70.9 86 44.2
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-10 70.9 93 41.9
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-10 70.5 93 40.9
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-10 70.1 93 34.4
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-10 70.1 105 40.0
Nitab4.5_0007360g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-10 70.1 76 50.0
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.2e-10 69.7 93 40.9
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.2e-10 69.7 96 33.3
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.2e-10 69.3 95 34.7
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.1e-10 68.6 95 34.7
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-10 68.6 104 37.5
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 9.3e-10 68.2 96 34.4
Nitab4.5_0000924g0030 Nicotiana tabacum HOM05D006864 ORTHO05D285280 9.3e-10 68.2 71 57.7
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.3e-10 68.2 93 38.7
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-09 67.8 95 35.8
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-09 67.4 92 40.2
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-09 67.4 207 27.5
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-09 67.4 95 33.7
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-09 67.0 93 33.3
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-09 67.0 95 34.7
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-09 67.0 90 42.2
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-09 66.6 95 37.9
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-09 66.2 95 32.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-09 66.2 80 36.2
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-09 65.9 106 37.7
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-09 65.9 84 42.9
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 4.6e-09 65.9 125 28.8
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 4.6e-09 65.9 125 28.8
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 7.9e-09 65.1 95 33.7
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 7.9e-09 65.1 104 31.7
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 1.0e-08 64.7 125 28.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-08 64.3 112 33.0
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 1.3e-08 64.3 93 37.6
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.8e-08 63.9 95 32.6
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-08 63.2 96 29.2
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 3.9e-08 62.8 96 28.1
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 3.9e-08 62.8 96 28.1
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-08 62.0 82 40.2
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-08 61.6 92 32.6
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 8.7e-08 61.6 92 32.6
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 8.7e-08 61.6 92 32.6
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-08 61.6 94 36.2
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-08 61.6 92 32.6
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 1.1e-07 61.2 94 36.2
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-07 60.8 92 32.6
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-07 60.5 94 35.1
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-07 60.5 94 35.1
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 2.5e-07 60.1 94 31.9
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 2.5e-07 60.1 94 31.9
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 2.5e-07 60.1 94 31.9
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 2.5e-07 60.1 94 31.9
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-07 60.1 94 36.2
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-07 60.1 92 31.5
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-07 60.1 92 31.5
Nitab4.5_0017747g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-07 59.7 102 37.3
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-07 59.3 144 29.9
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-07 59.3 80 42.5
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-07 59.3 97 33.0
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.7e-07 58.9 96 30.2
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 5.7e-07 58.9 114 30.7
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-07 58.9 92 31.5
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-07 58.5 97 36.1
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 9.6e-07 58.2 94 30.9
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-07 58.2 92 30.4
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-06 57.8 127 26.8
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.3e-06 57.8 104 35.6
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-06 57.4 108 34.3
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 1.6e-06 57.4 107 27.1
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-06 57.0 86 39.5
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 2.1e-06 57.0 92 30.4
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 4.8e-06 55.8 94 30.9
Nitab4.5_0019527g0020 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.8e-06 55.8 26 92.3
Nitab4.5_0003079g0090 Nicotiana tabacum HOM05D006864 ORTHO05D000013 6.3e-06 55.5 34 73.5
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 6.3e-06 55.5 92 31.5
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 8.2e-06 55.1 107 25.2


User provided reference genes

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