Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 9.6e-147 523.5 264 100.0
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.2e-134 481.9 250 98.0
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 1.3e-132 476.5 265 92.5
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.1e-126 456.8 265 87.2
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 1.4e-126 456.4 265 89.4
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 2.5e-126 455.7 265 89.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 5.5e-126 454.5 265 87.2
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 7.2e-126 454.1 265 87.2
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.1e-125 452.6 265 87.2
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.0e-124 450.3 265 87.5
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 1.3e-124 449.9 261 86.6
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.8e-124 449.5 265 86.8
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 3.7e-122 441.8 262 84.4
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 6.3e-122 441.0 263 83.3
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 2.4e-121 439.1 263 82.5
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 3.1e-121 438.7 262 84.0
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 2.6e-120 435.6 262 84.0
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 2.6e-120 435.6 264 82.6
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.4e-120 435.3 264 82.6
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 5.9e-120 434.5 264 81.8
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 1.3e-119 433.3 260 83.5
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 2.9e-119 432.2 262 83.2
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 3.8e-119 431.8 262 83.6
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 3.8e-119 431.8 260 85.4
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 5.0e-119 431.4 264 81.8
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.1e-118 430.3 262 81.7
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 1.9e-118 429.5 264 81.4
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.5e-118 429.1 262 83.2
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 2.5e-118 429.1 262 82.8
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 4.2e-118 428.3 261 81.6
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 4.2e-118 428.3 264 80.7
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 7.2e-118 427.6 265 82.3
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 7.2e-118 427.6 262 82.8
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 9.4e-118 427.2 262 81.3
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 2.1e-117 426.0 264 81.8
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 2.7e-117 425.6 263 82.1
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 7.9e-117 424.1 264 82.2
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 3.0e-116 422.2 264 79.2
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 3.0e-116 422.2 262 81.7
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 3.9e-116 421.8 264 79.9
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 5.1e-116 421.4 262 80.9
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 5.1e-116 421.4 263 82.5
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 1.1e-115 420.2 264 80.3
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.1e-115 420.2 264 80.7
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 1.1e-115 420.2 264 79.9
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.5e-115 419.1 264 79.9
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.5e-115 419.1 264 80.3
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 3.3e-115 418.7 264 79.9
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 4.3e-115 418.3 263 80.2
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 4.3e-115 418.3 250 84.0
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 7.4e-115 417.5 264 82.2
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.3e-114 416.8 250 84.8
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 1.7e-114 416.4 264 80.3
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.7e-114 416.4 264 80.7
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 1.7e-114 416.4 265 80.8
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 2.8e-114 415.6 264 80.3
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 8.2e-114 414.1 264 78.8
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.1e-113 413.7 264 79.5
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 1.8e-113 412.9 261 80.1
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 5.3e-113 411.4 250 82.0
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 5.3e-113 411.4 262 81.3
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 5.3e-113 411.4 271 78.6
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 9.1e-113 410.6 260 79.6
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 1.5e-112 409.8 254 82.3
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 4.5e-112 408.3 266 75.2
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.5e-112 408.3 262 77.5
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 5.9e-112 407.9 272 78.3
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 7.7e-112 407.5 263 81.0
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 7.7e-112 407.5 260 80.8
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.3e-111 406.8 262 78.6
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 1.3e-111 406.8 263 78.7
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 3.8e-111 405.2 264 77.7
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 3.8e-111 405.2 262 78.6
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 5.0e-111 404.8 263 79.1
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 1.4e-110 403.3 267 77.9
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 7.2e-110 401.0 257 79.0
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.7e-109 399.1 262 78.2
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 4.7e-109 398.3 262 78.2
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 4.7e-109 398.3 263 78.3
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 6.1e-109 397.9 261 79.3
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.3e-108 396.0 264 76.1
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 6.7e-108 394.4 284 73.9
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 8.8e-108 394.0 264 77.3
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.0e-107 392.9 287 71.4
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.0e-107 392.9 264 75.4
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.6e-107 392.5 262 77.5
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 2.6e-107 392.5 251 77.3
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 3.3e-107 392.1 265 74.7
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 5.7e-107 391.3 303 69.0
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 2.8e-106 389.0 256 78.1
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 4.8e-106 388.3 261 75.1
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 8.2e-106 387.5 264 75.4
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 1.8e-105 386.3 284 73.6
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 4.1e-105 385.2 258 75.2
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 7.0e-105 384.4 261 76.2
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 7.0e-105 384.4 262 75.6
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 1.0e-103 380.6 266 73.7
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 2.2e-103 379.4 261 75.1
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.2e-103 379.4 262 75.2
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 3.2e-102 375.6 279 70.3
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.7e-101 371.7 250 76.0
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 1.8e-100 369.8 235 77.4
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 8.8e-100 367.5 317 64.0
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 2.6e-99 365.9 261 71.6
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 9.7e-99 364.0 251 73.7
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 1.7e-98 363.2 259 71.8
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 4.8e-98 361.7 263 70.3
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 9.1e-97 357.5 263 70.7
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.6e-96 356.7 256 70.3
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.6e-96 356.7 256 70.3
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 1.3e-95 353.6 264 70.5
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.9e-95 352.4 266 69.2
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 3.8e-95 352.1 235 76.6
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 5.0e-95 351.7 272 69.9
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.5e-94 350.1 261 69.3
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.5e-94 350.1 261 69.7
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 4.2e-94 348.6 258 71.7
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 5.5e-94 348.2 255 68.2
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 9.4e-94 347.4 261 69.3
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.6e-93 346.7 263 67.7
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 2.1e-93 346.3 261 68.6
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 3.6e-93 345.5 227 77.1
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 3.6e-93 345.5 263 67.3
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 4.7e-93 345.1 198 86.9
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 6.1e-93 344.7 261 68.6
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 8.0e-93 344.4 261 68.6
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 2.3e-92 342.8 252 69.8
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 4.0e-92 342.0 261 67.8
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 5.2e-92 341.7 261 68.6
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 8.8e-92 340.9 262 68.7
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 1.2e-91 340.5 198 88.9
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 2.0e-91 339.7 255 67.8
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 3.4e-91 339.0 261 68.2
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 3.4e-91 339.0 261 68.2
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 7.5e-91 337.8 259 68.7
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 1.7e-90 336.7 261 67.8
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 2.2e-90 336.3 261 67.4
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 8.3e-90 334.3 260 68.1
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 1.4e-89 333.6 205 82.0
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 3.1e-89 332.4 261 69.0
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 1.0e-87 327.4 280 63.6
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.5e-86 322.8 260 65.4
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 2.8e-82 309.3 262 63.0
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 2.7e-80 302.8 262 61.5
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 5.9e-80 301.6 240 67.9
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 5.0e-79 298.5 259 62.2
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 9.5e-78 294.3 260 60.4
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 2.1e-77 293.1 259 61.0
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 1.4e-76 290.4 258 60.1
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 5.4e-73 278.5 189 76.2
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.2e-69 267.3 144 91.0
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.6e-64 248.8 171 72.5
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 2.2e-42 176.8 214 49.1
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 5.4e-41 172.2 243 44.9
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 7.8e-40 168.3 275 38.5
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 5.1e-39 165.6 148 57.4
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.2e-32 144.4 118 65.3
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.6e-32 144.1 107 68.2
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.8e-29 133.3 74 93.2
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.4e-28 131.0 93 71.0
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 9.0e-28 128.3 225 39.6
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.4e-25 120.9 76 78.9
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 3.4e-19 99.8 176 38.1
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 4.2e-17 92.8 150 37.3
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.5e-14 83.6 85 52.9
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 8.2e-13 78.6 40 90.0
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 2.0e-11 73.9 40 77.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.2e-10 70.5 40 77.5
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 3.8e-10 69.7 123 42.3
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 5.0e-10 69.3 43 69.8
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 2.1e-08 63.9 138 34.1
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 7.9e-08 62.0 86 34.9


User provided reference genes

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