Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000688g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-157 559.3 296 100.0
Nitab4.5_0001317g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-78 297.4 220 71.8
Nitab4.5_0013298g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.7e-70 269.2 267 62.5
Nitab4.5_0001558g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-69 266.5 207 69.1
Nitab4.5_0000759g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.0e-65 251.9 195 75.4
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.9e-64 249.2 293 56.7
Nitab4.5_0024925g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.8e-62 243.0 169 82.8
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.6e-60 236.5 266 59.8
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-59 234.2 295 52.9
Nitab4.5_0006703g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-58 231.1 210 62.4
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.7e-55 218.8 284 53.9
Nitab4.5_0000219g0140 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.6e-49 199.1 208 55.3
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-48 197.2 302 45.7
Nitab4.5_0003132g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-46 191.0 136 72.8
Nitab4.5_0001464g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.7e-46 189.5 131 84.7
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.1e-45 184.9 135 70.4
Nitab4.5_0000649g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.0e-43 181.4 112 81.2
Nitab4.5_0011260g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-42 177.9 136 77.9
Nitab4.5_0000699g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-41 174.5 112 80.4
Nitab4.5_0003110g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-41 174.1 113 77.9
Nitab4.5_0000514g0220 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.9e-40 169.5 105 78.1
Nitab4.5_0004038g0060 Nicotiana tabacum HOM05D006812 ORTHO05D012242 7.4e-39 165.2 189 60.8
Nitab4.5_0000437g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-38 164.1 102 81.4
Nitab4.5_0000904g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.2e-38 163.7 112 77.7
Nitab4.5_0000638g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.8e-38 163.3 98 84.7
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.8e-38 163.3 113 74.3
Nitab4.5_0000569g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-36 157.5 101 81.2
Nitab4.5_0001171g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.9e-36 155.6 98 80.6
Nitab4.5_0000437g0100 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.1e-34 151.4 126 64.3
Nitab4.5_0002002g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.9e-34 150.6 98 76.5
Nitab4.5_0008296g0030 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.2e-34 149.8 152 58.6
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.6e-33 146.4 99 76.8
Nitab4.5_0003465g0040 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.0e-32 144.8 212 55.2
Nitab4.5_0001597g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-32 143.3 113 69.0
Nitab4.5_0004958g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-31 141.4 263 38.4
Nitab4.5_0000487g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.5e-31 138.7 275 42.9
Nitab4.5_0000011g0230 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-29 133.7 165 55.8
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-29 133.7 112 63.4
Nitab4.5_0000742g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.0e-28 130.6 113 65.5
Nitab4.5_0007565g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.9e-27 126.7 82 78.0
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.4e-26 121.7 130 53.8
Nitab4.5_0000762g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-25 120.9 146 50.0
Nitab4.5_0002775g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000137 4.7e-25 119.4 264 36.4
Nitab4.5_0000073g0470 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-24 116.7 227 37.0
Nitab4.5_0000912g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.8e-22 109.4 113 54.9
Nitab4.5_0027154g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.8e-22 109.4 79 69.6
Nitab4.5_0000453g0050 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.8e-21 107.5 124 53.2
Nitab4.5_0001852g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.1e-21 106.7 107 57.0
Nitab4.5_0000569g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000137 7.0e-21 105.5 96 61.5
Nitab4.5_0000904g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000137 7.0e-21 105.5 115 56.5
Nitab4.5_0000078g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.1e-21 105.1 150 46.7
Nitab4.5_0002002g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-19 101.3 60 86.7
Nitab4.5_0007174g0030 Nicotiana tabacum HOM05D014517 ORTHO05D000482 1.5e-18 97.8 55 83.6
Nitab4.5_0004357g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-17 94.4 217 41.0
Nitab4.5_0000762g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.1e-17 94.0 126 50.8
Nitab4.5_0002397g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.7e-17 92.8 62 75.8
Nitab4.5_0000867g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.4e-16 91.3 89 60.7
Nitab4.5_0000422g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-16 90.1 56 76.8
Nitab4.5_0015378g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.8e-16 88.6 94 54.3
Nitab4.5_0007904g0010 Nicotiana tabacum HOM05D008636 ORTHO05D000137 1.5e-15 87.8 187 31.6
Nitab4.5_0001170g0260 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.4e-15 86.7 52 82.7
Nitab4.5_0009150g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.2e-14 84.0 64 70.3
Nitab4.5_0000699g0190 Nicotiana tabacum HOM05D006812 ORTHO05D012242 6.3e-14 82.4 95 54.7
Nitab4.5_0002002g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 6.3e-14 82.4 71 63.4
Nitab4.5_0007686g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.1e-13 79.7 80 55.0
Nitab4.5_0003110g0150 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.7e-12 77.0 101 48.5
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-11 75.1 185 31.4
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-11 74.3 47 72.3
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.3e-10 69.7 184 30.4
Nitab4.5_0007686g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.6e-10 69.3 62 62.9
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.5e-10 68.6 179 25.7
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-09 67.8 178 27.0
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 6.1e-09 65.9 156 30.1
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 6.1e-09 65.9 156 30.1
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 6.1e-09 65.9 156 30.1
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 8.0e-09 65.5 156 30.1
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 1.0e-08 65.1 175 30.3
Nitab4.5_0001464g0120 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.3e-08 63.9 58 60.3
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 2.3e-08 63.9 155 29.0
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 4.0e-08 63.2 156 28.8
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 5.2e-08 62.8 162 30.9
Nitab4.5_0008167g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.2e-08 62.8 176 25.6
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 1.5e-07 61.2 175 29.7
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 1.5e-07 61.2 175 29.7
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 2.0e-07 60.8 176 29.5
Nitab4.5_0011642g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.0e-07 60.8 122 29.5
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 2.6e-07 60.5 114 34.2
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 5.7e-07 59.3 178 29.2
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.7e-07 59.3 159 29.6
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.7e-07 59.3 163 27.0
Nitab4.5_0023553g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.7e-07 59.3 185 28.6
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 7.5e-07 58.9 162 30.2
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 7.5e-07 58.9 162 30.2
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.5e-07 58.9 188 26.1
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.2e-06 57.4 185 28.1
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-06 57.4 168 29.2
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 2.2e-06 57.4 151 29.1
CANSAT25G1366 Cannabis sativa HOM05D008636 ORTHO05D000137 2.9e-06 57.0 167 28.7
CANSAT01G2792 Cannabis sativa HOM05D008636 ORTHO05D000137 3.7e-06 56.6 114 33.3
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 3.7e-06 56.6 114 33.3
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-06 56.6 181 27.1
Nitab4.5_0008487g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.7e-06 56.6 44 65.9
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-06 56.6 185 25.9
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.9e-06 56.2 151 30.5
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 6.4e-06 55.8 151 28.5


User provided reference genes

Program Settings